Bombus affinis (rusty patched bumble bee): 126917952
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Entry
126917952 CDS
T09368
Name
(RefSeq) transcription factor Sox-21-A-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126917952
Transcription factors [BR:
baff03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126917952
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
126917952
NCBI-ProteinID:
XP_050581394
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Position
6:7590930..7594946
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AA seq
312 aa
AA seq
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MISSHQQHPSYGFLSGMDLHSVHHMGQDINQQSLTPQEQHIKRPMNAFMVWSRIQRKKIA
LDNPKMHNSEISKRLGAEWKLLSDAEKRPFIDEAKRLRAVHMKQHPDYKYRPRRKPKIAV
SIGNGKTVSLNSSSFASFPLPPYFAAPATSVSHHHPHPLDYPPLPPYFGSAFDAVHFSKL
VAGSGTGSPSTNAAADVANNNAASAAAVVSSFYTGLYSTPTTPTKPYPTTASHLGPLFPT
GHHSVPATTSHPPLMFQSSAATGPGSIVTTTSSPGSSPGSTPIPSSHQHVPTSATSTTLD
MEQLRRPVPVIY
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgataagctctcaccaacaacatcccagctatgggtttctttccggcatggacctccat
tccgttcaccatatgggccaggacataaaccaacaatcattaacaccgcaggagcaacac
atcaagaggcctatgaacgcgtttatggtatggtctcggattcaaagaaaaaagatcgca
ttagataaccctaagatgcataattcagaaatatctaaacgacttggtgcggaatggaag
cttctctctgatgcggaaaaacgacccttcatcgacgaggcaaaacgcctgcgtgctgtg
catatgaagcaacatccagactataaataccgtccacgaagaaaaccaaagattgcagta
tccattggtaatggtaaaacagtgtcactaaattcaagtagtttcgccagtttcccatta
ccgccttacttcgctgcacctgccacctcggtttctcaccaccacccacaccctctcgat
tatccgcccctgccgccctactttggatccgccttcgacgccgtccacttcagcaaactg
gtagctggtagtgggacaggatcgccatcgacgaacgcggcagcagatgtagccaacaat
aacgcagcttccgcggcagcagtagtcagtagcttctacacgggactctattccacacct
acgacaccaactaagccgtatccgacgacggcgtctcatctgggaccactatttccaact
ggacaccacagtgtacctgcgactacatctcacccacctttaatgtttcaatcttcggcg
gcaactggccccggaagtattgtgacaacgaccagcagtcctggaagcagtccaggatct
actcctataccatcgtcccatcagcatgtccctacatcggctacatcgaccacgttggat
atggaacagctacgtcgaccagtccccgtgatatattaa
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