KEGG   Bombus affinis (rusty patched bumble bee): 126918009
Entry
126918009         CDS       T09368                                 
Name
(RefSeq) gem-associated protein 5
  KO
K13133  gem associated protein 5
Organism
baff  Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:baff00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:baff03019]
    126918009
   03041 Spliceosome [BR:baff03041]
    126918009
Messenger RNA biogenesis [BR:baff03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     126918009
   mRNA cycle factors
    P-body specific factors
     126918009
Spliceosome [BR:baff03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    126918009
SSDB
Motif
Pfam: Beta-prop_RIG_2nd TPR_GEMI5 Beta-prop_THOC3 WD40_CDC20-Fz WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_1st WD40_RFWD3 WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th NBCH_WD40 Tricorn_2nd TAF1C_beta-prop FYVE_2 DDE_Tnp_IS240 CD_NTase_C
Other DBs
NCBI-GeneID: 126918009
NCBI-ProteinID: XP_050581485
LinkDB
Position
6:complement(9046140..9053068)
AA seq 1317 aa
MNEITLPPSPNWYLSNILACSFNGTIAWGARNIIVIGKLNENDKILQYSIIKHGHKSKVT
CLAFTPQFEEVNANLIASTGDDNTIKIWNSETLSVTYTYLLENDKQAIGVEWSYKDPYVI
YAATSDGCVLSWNAYFNTVSSISLGKVIPTYISSCPHDPHLVAVGSKSGLVYIVNFQDKG
KVVYKLRGHDTEIVSLSWCPSKNNVLKGNLNKDLLLASGGKDRSIFIWKAGGDGRYEMTI
SLPSAPLDSQQHRSKLNASVGNWVVVNWIEPKLLLTSSCWGELISWDLSTMIKGKPNAKV
IHAHHSRGLFCIAHVPNTQDISEENWRIRQSCRHTIWTVAQDRRIICCGIKENNVEIDYD
IFTQSGFVYCMAACPLDTSHIAFGVGDAMLRLWNLSAAHDTTFDITVLWQKIKGKIRAIA
WHPEKENLLAYATDEGRVGVFNTNGNKSPTLYRQYHRSVIYTIGWGPSPNNKYVLYSCGE
GELVYYDSEKVTNEEPKSVLKKECTEFSWKPDFSCLAVGFENGTISFLNRKFETRGCAKF
ATEMVHCLVWHPESTATDLTFSQLKNYLAVAFESCTILIFDLSNFIDHFEKMEDSTNNEN
LKEKCDIYKVHEIVASLTGHVQNVVCLAWSPHVSGHLISSSYDGTAQIWNVRTQELIATY
TGHNGPVLCCMWSPLDPDFIITGSADSTVRIWRVAYNLPQKKVYKKLPKKAKKKQNETNK
IVDTIENSLLELTNATSQCSISESKTMMITETKNKKVRSYFSKCPNTASQKTLLLHSLLN
IVKNMKSENFNMEEVQKDTSYHIVPILFSSQENFISYLTTEKSAHIERNNYDIIAEMDVW
YDNLKQNLEEAAKEKRLNDFLVSLSASLSMKIWKDMCELYAYQLVTEGNPCKAVSYLLCI
HKTYKAIEVFQAANLYKEAYVLARCRLESDDPVLTEILKEWAKYSVNSGNFEQAAWIHTK
LGEFSDTVKYLARRKDAATLITAAEIAFLCNDEISSKSLAEQAIIATLINSEYDFARNII
EKFPYLKYQEIYLLTYEELKKVIKGNVTLDLIQTWIDGKSNYGLLQTLEAVCGDCNSYYT
DLCRNSFCSISDKEKMLWLTIGHEVALAIASIEKEQKLKHIVTALHTITQFELLHQKDLE
HLHSFLIEIIIKLDIKSPMDETSIYTKADYSVSISLRAYLCYALLNWFVYNINEESINNN
IQNYTNLIEHLLEDALNKQAIRHWTVTNEINKLENQLASAKCKMQEEIKTDQDIESFMEK
LNTLKKQKSQILNDLVYIPNPVMVYGKANELCSKLCDETIKNKFLESISKMWLDATT
NT seq 3954 nt   +upstreamnt  +downstreamnt
atgaatgaaataactttaccaccctcaccaaattggtatttaagtaatattcttgcttgt
tcttttaatggtacaatagcatggggtgctagaaatataattgttattggtaaacttaat
gaaaatgataaaatattacaatactctattattaagcatggtcacaaatcaaaagtgaca
tgtcttgcatttactcctcagtttgaagaagtaaatgctaatttaatagcttccacagga
gacgataacacaattaaaatatggaattcagaaacattatctgtaacttatacttatctc
ttagaaaatgataaacaagcaataggcgtagaatggtcctataaagatccttatgttata
tatgcagcaacttctgatggttgtgtattatcatggaatgcttattttaatactgtttct
tcaatttcattaggaaaagtgatacctacttatatttcttcttgtcctcacgatccacat
cttgtagctgtaggttcaaaaagtggcttagtttatatcgttaattttcaagataaaggc
aaagtagtttacaaacttagaggacatgatactgaaatagttagcttatcatggtgtccc
tcaaaaaataatgtactaaaaggaaatttaaataaagatttactgttagcttcaggaggg
aaagatagatcaattttcatttggaaagctggtggagatggacgttatgaaatgacaatt
tcattgccttcagcacctcttgattctcagcagcatagaagtaaattaaatgcttctgta
ggtaattgggtagtagttaactggatagaacctaaactattgcttacaagttcatgttgg
ggtgaattaatctcttgggatttatcaacaatgataaaagggaaacctaatgccaaagta
atacatgcacatcacagcaggggtttattttgtattgcgcatgtaccaaatacccaagac
atttcagaagaaaattggagaataagacaaagttgtagacatacaatttggactgtggcg
caagatcgaagaattatttgttgtggaataaaagaaaataatgttgaaatagattatgat
atatttacacaaagtgggtttgtttattgcatggctgcttgcccattagacacttcacat
attgcatttggtgttggagatgcaatgttacgattatggaatttatcagcagcacatgac
actacttttgatataaccgttttatggcaaaaaattaagggaaaaattcgcgcgatagca
tggcatcctgaaaaagaaaatttattggcttatgcaactgatgaaggtcgagttggtgta
tttaatacaaatggaaataaatcgcctacattgtacagacaatatcatagaagtgtaata
tatactattggttggggcccaagtccgaacaacaaatatgttttatactcttgtggagag
ggagagcttgtgtattatgactcagaaaaagttacaaatgaagaaccaaaatctgtattg
aaaaaagaatgtacagaattttcttggaagccagatttttcttgcttggcagtaggattt
gaaaatggaacaatttcatttcttaatcgaaaatttgaaacacgtggatgtgctaagttt
gcaacagaaatggtgcattgcttggtctggcatcctgagagtacagcaacagacttgaca
ttttctcagctaaaaaattatttagctgttgcttttgaatcatgtactatacttattttc
gatttatctaattttatagatcattttgaaaaaatggaagattcaacaaataatgaaaat
ttaaaggaaaaatgtgatatttataaagtgcatgaaattgtagcttctttaactggacat
gtacaaaatgttgtctgtttagcatggagtccacatgtaagtggacatctaatatctagt
agttatgatggaactgcacagatatggaatgttagaacacaagaattaatagctacatat
acaggacacaatggcccagtattgtgttgcatgtggagtccattagaccctgattttatt
ataacaggctctgcagattctacagtacgaatatggagagttgcttataatttgccacaa
aaaaaagtatataaaaaattgccaaaaaaagctaaaaagaaacaaaatgaaacaaataaa
attgttgatactattgaaaatagtttactagaattaactaatgctacatcacaatgttct
atttcagaatcaaagacaatgatgataacagagacaaaaaataaaaaagtacggtcatat
ttttcaaaatgccctaatacagcatctcaaaaaacacttttacttcattctcttttaaat
atcgtaaaaaatatgaaaagtgaaaattttaatatggaagaggttcagaaagatacttcg
tatcatatagtaccaatattattttcatcgcaagaaaattttatatcttatttaactact
gaaaaatctgctcatattgagagaaataactatgatataatcgcagaaatggatgtatgg
tatgataatctcaaacaaaatttagaagaagctgctaaagagaaacgtctcaatgacttt
cttgtttcactttcagctagtctgtccatgaaaatatggaaagatatgtgtgaactatat
gcatatcagttagtaactgaaggcaatccttgtaaagcagtatcatatttactttgtata
cataaaacctacaaagctatagaagtatttcaggctgcaaatttgtataaagaagcatat
gttcttgcaagatgtagacttgaatctgatgatccagtactaacagaaatattaaaagaa
tgggcaaaatatagtgtaaattcaggcaatttcgagcaagcagcatggattcatactaaa
ttaggagaattttctgatacagtaaaataccttgcacgccgtaaagatgcagctacgtta
ataacggcagctgaaattgcttttttatgtaatgatgaaatatcaagtaaatctttagct
gagcaagcaataattgcaactttgataaattcagagtatgattttgcacgaaatataata
gaaaagtttccatatctcaagtatcaagaaatatatttgttaacttatgaagaacttaaa
aaagttattaagggaaatgtaactctcgatttgattcaaacatggatagacggaaaatca
aattatggtctattacaaactttagaggcagtttgcggtgattgtaattcttattacact
gacttgtgtcgaaatagtttttgcagtatttcagacaaggagaaaatgttatggttaaca
attggtcatgaggttgcattagcaatagcctctattgaaaaagaacagaaattaaagcat
attgttactgcattacatacaatcactcaatttgaactactacatcaaaaagatttagaa
catctacatagttttttaattgaaattatcataaaactagatattaaaagtccaatggat
gaaacaagtatttatacaaaagctgattattctgtatcaattagtttacgagcttattta
tgttatgctcttctaaattggtttgtatataatataaacgaggaatctattaataataat
atacaaaattacaccaatttgattgaacatttacttgaagatgcattaaataaacaagca
ataagacactggacagtaacaaatgaaattaacaaattggaaaatcaattagcttctgca
aaatgtaaaatgcaagaagaaattaaaactgatcaagatatagaatcttttatggaaaaa
ctaaatacattaaagaaacagaagagtcagattctcaatgatttagtttatatcccaaat
cctgttatggtatatggcaaagcaaatgaactatgcagcaaattgtgcgatgaaactata
aaaaataagtttttagaaagtatttccaaaatgtggttagatgctactacataa

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