Bombus affinis (rusty patched bumble bee): 126918037
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Entry
126918037 CDS
T09368
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04120
Ubiquitin mediated proteolysis
baff04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126918037
04120 Ubiquitin mediated proteolysis
126918037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126918037
Enzymes [BR:
baff01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126918037
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
U-box type E3
126918037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Glyco_hydro_67N
Motif
Other DBs
NCBI-GeneID:
126918037
NCBI-ProteinID:
XP_050581564
LinkDB
All DBs
Position
6:complement(10333485..10338768)
Genome browser
AA seq
1103 aa
AA seq
DB search
MSELSQEEVRRRRMARLAGLDSFNSTVNSNHNNDPVSPNTPGPSKTFTEQIISPLKQQQF
QNPGVPMEIEESNNKQCSSTGVDIDSGIENMEVEEPDRKELKPRSRTTSSSTEVTTEQIH
AVISRVLRISWKEPAEGCIFLPQTAAYALSTKLVDATEIINQALMEVLCMFMRDEDPLKE
INIDTSSDREDSPNSQTSPLQSPVTTFCRCDICCKSSQPKSLIYLLDCYSRVAIEERNHP
KKSSTPPLSDVLAVLRAQCVQYSSLVLQGLVGISQSSTTYPLSMTPLLYPVLSQSLPRGY
LHELVARTHTNAAVCNKIFTPLLQGLYLSMQQASLIRNTHRRPIEALEELIEICCGPSSN
VRPICRLIVHQIQFLPDIMTSAAGKEITTTSLLGPFLSVSVFAEDQLDMAETFLSGNLFV
NKSITLTLQQELESIRTSLHKIFHAILASSNCREAMLTYLATLLRYNEKRAQIQTEEFSL
AGDGFMLNLLSVLQKLSVKIKLDTVDPLYPFHPASFIEIKNDTRLKLTCQEVTDWLKHLE
RTHKWVEPKFPTQCWFLTLHCHHIALLPALQKYQRKLRTLRDVQKMLDDLQATEPQWKDS
PFASRNKELIERCKEQLKHLGKSKVYTDAGLIDPVLLRRCLHFYISVAEILLSLLTQTSP
GNPIPELPLPQEVPQKFTALPEWYVEDIAEFILFTLQFCPGVIINNMDNSLITWLLVVVC
TPHCIRNPYLIAKIIEVIFVINPNVQGRTESLHDQVMAHPISKTLLASYLMKFYTDVETT
GSSSEFYDKFSIRYHISLILKSMWDSPVHRKSIIDESNNGNQFVKFINMLMNDTTFLLDE
SLESLKRIHEIQELMSDLKAWSALSREQQHSRMKQLAADERQARSYLTLAKETVAMFQYL
TDDITEPFLRPELVGRLCAMLNFNLQQLCGPKCKNLKVRIPQKYGWEPRALLSQLVDIYL
HLDCEIFAAALAADERSFCMELFIDAANKLERSVIKSIIEIERFVALAERAADIARDNRA
RDADYGDAPEEFRDPLMDTLMEEPVKLPSGIVMDKAVIIRHLLNSATDPFSRQPLSEDML
TPMPDLEKRISMWKQQKKKSTKI
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttaagccaagaggaagtaagaagaagacgtatggctcgtttagcgggctta
gacagcttcaattcaacagtcaattcaaatcacaataatgatccagtttctccaaataca
ccaggtccatctaaaacatttacggaacaaataatatcaccattgaaacaacaacaattt
caaaatcctggagtaccaatggagatagaagaaagtaataacaagcaatgtagcagtact
ggtgttgatatagattcagggattgaaaatatggaagttgaagagcctgatagaaaagaa
ttaaaaccaagatcacgtactacaagttccagtacagaggtaactacagaacaaatacat
gcagttatatcacgtgtactacgcatatcgtggaaagaaccagcagagggttgtatattt
ttaccacaaacagcagcatatgcattatcaacaaaactcgttgatgccacagagattata
aatcaagcattaatggaggttttatgcatgtttatgagggatgaggatcctttaaaagaa
attaatatagacacctcctcggatagggaagatagtccaaatagtcaaacaagtccatta
caaagtccagttacaacattttgccgttgtgatatttgctgtaagtcgtcgcaacctaaa
agtctcatttatttactagactgctattcaagagttgcgattgaagaacgaaatcaccca
aagaaatcgagtacaccaccactgtctgatgtactagctgttctaagggcacagtgtgtt
cagtattccagtcttgtactacaaggcctagttggtatttctcagtcttcaaccacatac
ccgttatccatgacacctcttctgtacccagtactttcgcaaagtttacctcgtggttat
ttacacgagcttgttgcgagaacgcacacaaatgcagcagtatgtaataaaatttttaca
ccactcttacaaggcttgtatctttcgatgcagcaagccagtttaattaggaatacgcat
cgaagaccgattgaagcattagaagagttaatagaaatttgttgtggaccgagtagtaat
gtacgaccaatctgtcgtttaatcgttcatcaaattcaatttttacctgacattatgacg
tcggccgctggtaaagaaattacaacaacgtctctccttggaccgtttttgtcggtttct
gtgttcgcagaggatcaactggacatggctgaaacattcctcagtggtaatctgttcgtc
aataaatcgataactttaacgttacaacaagaattagaaagtatcagaacatcacttcat
aagatatttcatgcgatactcgcgagtagtaactgccgtgaagctatgttaacatactta
gcaacattattacgttacaatgaaaaacgtgctcaaatacaaacggaagaattctctctt
gccggagacggatttatgctgaatctcttgtcggtgttacaaaagctttctgtaaaaatt
aaactggacacggtagatccattgtatccgtttcatccagcaagttttattgaaataaag
aacgatacaaggctgaaacttacgtgccaagaagttaccgattggttaaaacatttagaa
aggacacacaagtgggtcgagccaaagtttccaacacaatgttggttccttactctacat
tgtcaccacatagcgttgttaccggctttacagaaataccagagaaagctgaggacttta
cgtgatgtgcaaaaaatgctcgatgatctacaagctaccgaaccgcaatggaaagacagc
cctttcgctagccgtaataaagaattgatagaacgttgtaaggaacaattgaaacatctt
ggcaaatctaaagtatacacagatgctggattaattgatcctgttttattaagaaggtgc
ttgcacttttacatttctgtagcagaaattctgctaagtttattgacacaaacttcacca
ggaaatcctattcccgaactgcctttgcctcaagaggttccacaaaagtttacagcatta
ccagaatggtatgttgaagatatcgcagaatttatactatttactcttcaattttgccct
ggtgtgataataaacaacatggataattcactcattacatggttacttgtagtagtatgt
actccacattgtatacgaaatccgtatttaatagcgaaaattattgaagtaatatttgta
ataaatcccaacgttcagggacggactgaatcgctccacgatcaagtaatggcacatcct
atatcaaaaacgttattagcatcatatttgatgaaattttacactgatgtcgaaacgacc
ggctcaagttcagaattttatgataaattttcaattcgttatcacattagtttaatactg
aaatctatgtgggatagtccagttcatcgcaagtcgatcattgatgaaagcaataatggg
aatcaatttgtgaaatttattaacatgttaatgaacgataccacatttttacttgatgaa
agtttggaatcgttaaagcgtattcatgaaattcaagaactaatgtcagatcttaaagca
tggtcagcgttatcccgcgaacaacaacattcgcggatgaaacaattggctgcagatgag
agacaagccagatcttatctcactttggccaaggaaactgttgctatgtttcaatattta
acagatgatattacagaaccatttttgcggccagagttagttggaagattatgtgccatg
ttaaattttaatctacaacaattatgtggccctaaatgtaaaaacttaaaagtaaggata
ccacaaaaatatggatgggaaccaagagctttactaagtcaattggtcgacatatatcta
catcttgattgcgaaatttttgccgctgctttggctgccgatgaacgttcattctgcatg
gagctatttattgatgccgcaaacaagttagaaagatcagtaatcaaatctatcatagag
atagaaagatttgtagcgcttgcggaacgtgctgcagatatagcaagggataatcgtgcg
cgcgatgcagattatggtgacgcaccggaagaatttcgagacccacttatggacacactc
atggaagaacctgttaaacttccgtctggtatagttatggataaagcagttattattaga
catcttctcaatagtgctacagatcctttcagtcgacaacctctcagcgaagatatgctt
acaccaatgcccgatttggagaaaagaatatcaatgtggaaacaacaaaagaaaaaatcg
acaaaaatataa
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