Bombus affinis (rusty patched bumble bee): 126918049
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Entry
126918049 CDS
T09368
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126918049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126918049
03009 Ribosome biogenesis [BR:
baff03009
]
126918049
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126918049
Spliceosome [BR:
baff03041
]
Complex A
U1 snRNP components
U1 related factors
126918049
Complex B
126918049
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
Pre-60S particles
Helicases
126918049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Cac1_C
HPIP_like
Motif
Other DBs
NCBI-GeneID:
126918049
NCBI-ProteinID:
XP_050581587
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All DBs
Position
6:9929048..9934916
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AA seq
533 aa
AA seq
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MLRHVMGAIGSLRIRTYGASYHGGNYRTKERGSVYANNANNRNGRFENRNKNNMHGTIGG
LKKPNWSFENLKPFKKDFYIPHPNVQSRHPQEIDTFRQENQITLKGEKIPNPIQHFEEGN
FPDHVMQCIRKQGFSEPTAIQAQGWPIAMSGQNMVGIAQTGSGKTLGYILPAIVHISSQQ
PLNRGDGPIALVLAPTRELAQQIQKVTYNFGYVRSTCIFGGAPKGNQARDLEHGVEICIA
TPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWP
KEVRNLAEEYLVDYTQLNIGSLTLSANHNILQIVDVCEEHEKQAKLQDLLQEISNVSPEG
GKTIIFVETKKKVESITKTIRRCGWPAVCIHGDKSQLERDFVLTEFRRNKDSILVATDVA
ARGLDVDDVKYVINFDYPTSSEDYIHRIGRTGRSNNSGTSYAFFTPQNSRQAKGLINVLK
EAKQVINPKLMELADRTGNDLARNRWGYGNYRRRETTFPKTHKRFDNLSYFDA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgttacgacatgtaatgggagctattggatccctgagaattaggacatatggagctagt
tatcatggtggaaactatagaacaaaagaaaggggatctgtatatgcaaataatgctaat
aacagaaatggacgatttgaaaatcgcaacaaaaataatatgcatggcaccattggaggc
ttaaaaaaaccaaactggagttttgaaaatttaaagccttttaaaaaagatttttatata
ccacatcctaatgttcaatcacgtcatccacaagaaatagatacatttagacaagagaat
cagattactcttaagggagaaaaaattcctaatcctatacaacattttgaagaaggaaat
tttcctgatcatgtaatgcaatgtattagaaagcaaggatttagtgaaccaactgctatt
caagctcaaggatggccaattgcaatgtctggacaaaatatggttggaatagcacaaact
ggatctgggaaaactttaggatacatcctacctgcaattgtacatattagcagtcaacaa
ccattaaatcgtggtgatgggccaattgctctagttctagcaccaacaagagaattggca
cagcaaattcagaaagttacttataattttggctatgtaagaagcacttgtatttttggt
ggtgcgccaaaaggaaaccaagctcgcgatttagaacacggagttgagatttgcattgcc
acaccaggacgactaattgactttttggaacgaggtataactaatttacgtaggtgtacg
tacttggtattagatgaagcagatagaatgctagacatgggttttgaacctcaaattcga
aaaattattgaacaaattaggccagatagacaggtattgatgtggtctgcaacttggccg
aaagaagttagaaatcttgcagaggaatatcttgtagactatacacaattgaacattgga
tcattaacattatcagctaatcacaatattcttcagattgttgatgtctgtgaagaacat
gaaaaacaagcaaaattgcaagatcttcttcaagagattagcaatgttagtccagaaggt
gggaagacaataatttttgtagaaacaaagaaaaaggtggagagtattactaaaactatt
cgtcgatgtgggtggccagcagtatgtatacatggcgacaagtcgcaattagaaagagat
tttgttcttacagaatttagaagaaataaggattcaattcttgtagcaacagatgttgct
gctcgtggattggatgtcgacgacgtaaagtacgtgatcaacttcgattatccaacttca
tctgaagactacattcatagaattggtagaacgggccgatcaaataattcaggcacgagt
tatgccttctttacaccacaaaatagccgacaggctaaaggtttaattaatgtacttaag
gaagctaaacaagttatcaatccaaaacttatggaacttgcagacagaactggaaatgat
cttgcacgaaatcgttggggctatggaaattatcgcagaagagaaactactttccctaaa
acacataaacgattcgataatctaagttactttgacgcgtag
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