Bombus affinis (rusty patched bumble bee): 126918083
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Entry
126918083 CDS
T09368
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126918083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126918083
03041 Spliceosome [BR:
baff03041
]
126918083
03036 Chromosome and associated proteins [BR:
baff03036
]
126918083
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
126918083
Spliceosome [BR:
baff03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
126918083
Complex B
126918083
Complex C
U2 SnRNP specific factors
126918083
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
126918083
TFTC complex
126918083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
126918083
NCBI-ProteinID:
XP_050581656
LinkDB
All DBs
Position
6:complement(10596698..10604502)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNVFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADNDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PELYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDANNSEDLSPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQAVLAMSSRSW
LSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQISFP
LEYTPRKFAIHTDSAHLIIIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAVVARELAE
AFLSEEPNEAVFGAPRAGPGLWASLIRIIAPTTGQTFEVHRLEQNLAALCLSLVKFSNQG
DQLFLIVGIAKEFQLNPRVSSGGFLYTYRVNSECTNLELVHKTTLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPTKQKSISGDLERT
ASEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaacctgactcttcaacgagccacgggtatcacccatgcagtgcatggt
aatttttctggtagtaaaatgcaagaaattttggtttcacgtggaaagtcattggaacta
ttaagacctgatccaaacacagggaaagttcatactcttttgactgtagaagtctttgga
atcataagatctttaatggccttcagattaactggtggtacaaaagactatattgttgtt
ggatcagattctgggcgcattgtaattttagaatatattcctgctaaaaatgttttcgag
aaagtacatcaggaaacatttgggaaaagtggatgtagacgcattgtacctggacaatat
ttagctatagatcccaaaggaagagctgtaatgataggtgcaattgagaaacaaaagctt
gtttatattttaaatagagatccagaagctcgtcttacaatttcttcacctttggaggca
cataagagtaatacattagtttatcatactgtgggagtagatgtgggttttgaaaatcct
atgtttgcttgtttagaaattgattatgaggaagctgataatgaccctacgggagatgca
gcggtaaagacgcaacaaacattgactttgtatgaacttgatttgggtttaaatcatgtt
gtacgcaaatatagtgaacctttagaagaacacgcaaattttctcgtgtctgttcctgga
gggaatgacgggccgagtggtgttcttatttgctctgagaattatttaacatacaaaaat
ttaggagatcagcacgatattcgttgtccgattccgagaagacgtaatgatttagatgat
cccgaaagaggcatgatatttgtatgctctgctactcacaagacaaagagcatgttcttc
tttttggctcaaactgagcaaggagatatttttaaaattacactcgagacagacgaagat
atggtgactgaaattaaattaaaatactttgacactgtacctgttgcagcaagcatgtgc
gttttgaaaactggtttcttatttgtagcctcagagtttggtaaccattacctttaccaa
attgcacatttaggagatgatgacgacgaaccagagtttagctctgccatgcctcttgaa
gaaggtgatacgttcttttttgcaccaagaccacttagaaatttagtactggtcgatgaa
atggatagcttatcgccgataatggcatgtcaggtagctgatttagcaaacgaggatact
cctgaattatatataacttgtggtagaggaccacgatcaacgttacgggtattacggcac
ggtttggaagtatccgaaatggctgtcagtgaactgcctggtaatccaaatgctgtgtgg
actgttaaaagaagagtcgatgaggagtatgatgcttacatcatagtgtccttcgtcaat
gctactcttgtacttagtattggagaaactgtagaagaagtgactgattctggatttctt
ggtactacgccaacactgagttgctctgctttgggagaagatgccctagtacaagtatat
cctgatgggatacgtcatattcgagcagacaaacgtgtgaacgaatggaaagctcctggt
aaaaaaactatagtgaaatgtgcagtgaatcaacgtcaggttgtaattgcactcacggga
ggagaattggtatacttcgaaatggaccccacggggcaattgaatgaatatacagaacga
aaaaagatgccatcggaagtaatgtgtatggcgctcggtaacgtagcagttggtgaacaa
aggtcatggttcttggctgtcggtcttcaagataatacagtaaggattatttccctggac
ccttctgattgtttagcacccaggagtatgcaagctttaccggcggccgcggaaagtttg
tgtatcgttgaaatgggtgcgaaagatgcaaataattctgaagatttatcacctcaacaa
tccagtctctatttaaatataggtttacaaaatggcgttttgctaagaacagtattagat
cccatttccggtgatctcgcagatacgcgaactcgatatttgggttctcgacctgttaaa
ctatttaggataaaaatgcagggaaatcaagctgtgcttgcaatgagtagcagatcatgg
ttgagttattattatcaaaatcgttttcatttaacgccactgtcatacgaaagtttagaa
tttgcatcaggcttcagttctgaacagtgtccggaaggaattgtggccatttcgacgaat
acgcttagaatccttgctcttgaaaagttaggtgcggtgttcaaccaaattagttttcct
ttggaatatactccgagaaaattcgcaattcacacggactctgcacatctgataattatt
gaaacggaacacaatgcatatactgaagaaacgaaacaacagagaaggttacaaatggca
gaagaaatgcaagaagctgcaggagcagaagaggctgtggtagcgagagaattggctgaa
gctttcttatccgaggaacccaacgaagccgtgtttggtgcaccaagagctggacctggt
ttatgggcgtcgttaataaggataatagctcccacaacagggcaaacgtttgaagtacat
cgactcgaacaaaatttagctgctttatgtttgagccttgtgaaattttctaatcaggga
gatcagctgtttctcatagttggtatcgcgaaagagttccaattgaatccaagagttagc
agcggtggctttttatatacatacagagtgaatagcgaatgtaccaatctcgaattggtg
cataaaaccactttggatgaagtacctttggccatatgtccataccaaggaagggtatta
gttggtgttggtagaatgttgcgtttgtatgatatgggcaagaagaaattgttgagaaaa
tgtgaaaacaaacatattcctaatgctgttgtttctatcaatgcaattgggcaaagaatt
tatgtaagtgatgttcaggaatccgtatatgctgttagatataaacgccaagaaaatcag
cttatagtcttcgccgatgatacgcacccgagatggataacgacaacgtgcgttctagat
tatgataccgttgccactgccgacaaatttggaaatattgctgttatacgcttagcaagt
ggaattaacgacgatgtggacgaagatccaactggaaacaaagccttatgggataggggt
ttattaaatggagccagtcagaaggcagacacagttgcttgctttcatgttggtgaaact
gttatgtctttgcaaaaggcaactcttattcccggtggttctgaaagtttggtgtatacg
acattaagtggaacagttggcgtcctcgtcccctttacgagtcacgaggaccatgatttt
ttccaacatttggaaatgcatatgcgctcggagcatccaccactttgtggaagagatcat
ttatcatttagatcgtattattatcctgtaaagaatgtaatagacggagatctttgcgaa
caattcaattctattgaaccgacaaaacagaaaagtatatctggcgatctcgaacgaaca
gcttccgaagtgtcaaaaaaacttgaggatattcgtacgcgatatgctttctaa
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integrated database retrieval system
