Bombus affinis (rusty patched bumble bee): 126918187
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Entry
126918187 CDS
T09368
Name
(RefSeq) host cell factor isoform X1
KO
K14966
host cell factor 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03083
Polycomb repressive complex
baff04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
126918187
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
126918187
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
baff01009
]
126918187
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
baff03036
]
126918187
03029 Mitochondrial biogenesis [BR:
baff03029
]
126918187
Protein phosphatases and associated proteins [BR:
baff01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126918187
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
126918187
HMT complexes
COMPASS/SET1 complex
126918187
MLL-HCF complex
126918187
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
126918187
Mitochondrial biogenesis [BR:
baff03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
126918187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
NANM
Motif
Other DBs
NCBI-GeneID:
126918187
NCBI-ProteinID:
XP_050581784
LinkDB
All DBs
Position
7:13679107..13691835
Genome browser
AA seq
1557 aa
AA seq
DB search
MVIMAAPMLKWKRITNPSGPQPRPRHGHRAVALKDLMVVFGGGNEGIVDELHVYNTTTNQ
WFVPSTKGDIPPGCAAYGFVVDGSRILVFGGMVEYGKYSDELYELQAVRWEWKKLRPRPP
ENDSPPCPRLGHSFTLIGNRVFLFGGLANDSEDHKNNIPRYLNDLYTLELLPNGGTVWDV
PQTNGHAPPPRESHTGVSYTDSKTGKTCLVIYGGMSGCRLGDLWYLDVDSMTWHKPVVHG
PIPLPRSLHTATLIGHRMYVFGGWVPLVVDDVKVATHEKEWKCTNTLACLNIETWTWEQL
TVDTLEENVPRARAGHCAIGMHNKLYVWSGRDGYRKAWNNQVRVCCKDLWYLEVGKPSAP
SKLNLVRASLQALEIQWTPVPSAQYYILQIQKCKPSATTGTFPTVSTPANTATPTTTSAM
VTLATDSATSSPVTAAPELPHTPTTIRPSIPPQTPVRVQSTVQSPVQKPVPSQSVTKPSS
PLTPRVAGNLIRIRSPLVTTTPTATTATEQAPTSNTTVAGQTPAAMSGIAALAAAAAATP
KISMNNVPILPQTTANTIRMKNVQPGQQIRFAAPGATVLRTASPQQSKQIILQKPGQNIS
GQPQIVHLLKTAQAMVATVPKVSLIPGKTVQATGAKPLNQGAKILRLVNPNTVQGSKILT
TMKTSNIVAMSKGQNISGKQTIMITKPGGNGGLVGRNQIIVVTTGSNLRTIQAVTTSQAG
SGQTGNITTPVNVLPLSATNHVTNQQGVKMIVVSSGAMGGGTTGKPITITVPGQGGVPKT
VTITTKGSPQAIFNPGKSQIVTMPQMQKTPETVTVSGKPVTLQMSGGIGAKTVTLMPTSS
TMVTTSSASETIDTSKMLFVPSQKQPSASLASTSDGPATTDAALAALAAEAGLIDPVQEP
SGDLSFMVSTDDGGAGDGKMEESCNGDETTTAAALVSQMGAGESMQIDRDGNFLIPQVDG
PADLLLSDDDEENDKIDLAEDPVLENQEDSQVADSVSMEQDTDAAPVEAVHMDESSIKDP
ETLSEGASELPVSTSAAEDIPIDPEPSIDAQPDENDIPIEVSNEPEPANETDMQDMNDAS
VEEAQIKPEISSMQDPIEASSEEASMPDAMELPENDESEQMENNDIKLMAVDTYASESEK
PSVPEHLSPEDSLSQLSQEETQVLEKIKDEAVEPPMDLPEGTPMETLEDNDEPMVTDSCS
TSTTVNIPITTSIMQIKLEQPDEPMKQAKIPEPPASSVNSINLLEKEMDIKKPVIPMKME
IKDEPIKKESLKQEKMNGTRTENGDDSTALTTLATAALVSAEQPIKIKAEQTEKEKKEEE
WYDVGVTQESRFTVQHYYLPNDEPLDITQPLTMDVFEGRTKVPLEQGTIYKLRIAAVNSC
GQSDWSEVSAFRTYVPGFPGAPSAIKISKTADGAHISWEPPPNRNDGPILEYSAYIAMAN
TAPNNNGEPKTTASNSNLTFTKFYCGTNNSCSVSNSSLSAAYVDTTRTPAIIFRIAARNV
KGYGPATQVRWLQQASVASSDQTNFMENNPQVKRRGVNIRLQASSPQKKVKLKRPSS
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcatggcggcacccatgctaaagtggaagcggatcacaaatccgtccggaccc
cagccaagacctaggcatggacacagggcagttgctcttaaggaccttatggtcgttttc
ggcggtggaaatgagggtattgttgacgagcttcatgtctataatacgacaactaatcaa
tggtttgtaccatcgacaaaaggtgatattccacctggctgtgctgcatatggatttgtt
gttgatggaagtcgtattttggtttttggtggtatggttgaatatggaaagtattcagat
gagctttatgaacttcaagcagttagatgggaatggaaaaaattgagacccagaccaccg
gaaaatgattctccaccatgtcctagattaggacatagtttcacccttattggtaataga
gtctttctttttggaggattggctaatgatagtgaggatcataagaataatataccaaga
tatttaaatgacctatatacccttgaactacttcctaatggaggaacagtttgggatgta
ccacaaacaaatgggcatgcaccaccacctagagagtctcatactggagtgtcttatact
gatagtaagacaggaaaaacctgtttagtgatttatggtggtatgagtggctgtcgtttg
ggtgatttatggtatcttgatgttgattcaatgacttggcacaaaccagtggttcatgga
cctattccattaccccgttctcttcatactgccactttaattggtcatcgaatgtacgtt
tttggaggatgggtaccacttgttgttgatgatgttaaagttgcaacacatgaaaaagag
tggaaatgcacaaacacgctggcttgtttaaatatagaaacttggacatgggaacagtta
acggttgatactttggaggaaaatgttcctcgtgcacgtgctggtcactgcgcgattgga
atgcataataaactttatgtatggtctggtcgagatggatatcgcaaagcttggaacaat
caggttagggtttgttgtaaagatttatggtacctcgaagtcggtaaaccatctgcacca
tcgaaactgaatttagttagggctagtttgcaagcactggaaattcaatggacaccagtg
ccatctgcacagtactacatattgcaaatacaaaaatgtaaaccttcagcgacaactgga
acatttcctacagtcagcactccagcgaacacagcaacacccaccacgacatcggcaatg
gttactcttgcaactgattctgctacatcttcacctgttactgctgctcctgagcttcca
catactccaaccactattagaccgtccatacctccacaaactccggtccgagttcagtca
actgtgcaaagcccagttcaaaaaccagtaccatcacaaagcgtaacaaaaccatcaagt
ccattgacaccaagagtagccggaaatcttatcagaattcgttctcccttagttacaacg
acgccaacagcaactactgctactgaacaagctccaacttctaatactacagtggcaggc
caaacaccagctgctatgtcaggaattgctgccttagcagcagcagctgctgctacgcca
aaaataagcatgaacaatgtaccaattcttccacaaactacagctaatacaattaggatg
aaaaatgtacaaccaggccaacaaatacgtttcgctgcccctggagcaacagtattgaga
actgcttcaccacaacaaagtaaacaaattatcctacaaaaaccagggcaaaatatatct
ggtcaaccccagatagtacatcttcttaaaacagcacaagcgatggtagcaactgtgcct
aaagtaagcctcatcccaggaaagactgttcaagcaacaggtgcaaagccacttaatcag
ggggctaaaatattgagattagtaaatccgaatactgtacagggatctaagattcttaca
actatgaaaacatctaacatcgttgcaatgagcaaagggcaaaatattagtggtaaacaa
acgataatgattactaaacctggtggtaatggtggattagttggccgtaatcaaataata
gtagttacaacgggatctaatttaagaactatacaagccgtaactacatcccaagctggc
agtggacaaacgggtaatattaccacacccgtaaatgttttacccttatcagctactaat
cacgtaacaaatcaacaaggagtaaagatgatcgttgtgtcatctggtgcaatgggcggt
ggcactactggaaaaccgattactattacagttccaggccaaggtggtgttccaaaaacg
gtaactattacaactaaaggaagcccacaagctatctttaatcctggaaagagtcagatt
gttaccatgccacaaatgcagaaaacgccagagactgtcacagtatctggtaagcctgta
acattacaaatgtctggaggaataggtgcaaaaacggttactctcatgcctacaagtagc
acaatggtgactacttcaagtgcatcagagacaatagatacaagtaaaatgttatttgtc
ccatcacaaaaacaaccatcagcttcattggcatctacatctgatggtcctgccaccact
gatgcagcattggctgcattagctgcagaagcaggtttaatagatccagttcaagaacct
tctggtgatctatcattcatggtatctacagatgatggtggagcaggagatggtaaaatg
gaagaaagttgtaatggtgatgaaactacaacagcagctgctttggtttctcaaatggga
gctggtgaatcaatgcaaattgatagagatggtaactttttaattccccaagttgatggt
ccagcagatcttcttctgtctgatgatgacgaagagaacgataaaattgatttagcggaa
gatccggtgttagagaatcaagaagattcacaagttgcagactccgtaagtatggagcaa
gatacagatgcagcaccagtggaagctgttcatatggacgagtcttctataaaagatcca
gaaactttgtcagaaggagcatccgaacttcctgtttctacaagcgctgcagaagatatt
ccaatagatccagaaccttccattgatgctcagccagacgaaaatgacatacctattgaa
gtttctaatgaaccagaaccagcaaatgaaactgatatgcaagatatgaatgatgcatca
gttgaagaagcacaaataaaacctgaaatttctagtatgcaagatccaatagaagcttca
tcagaggaagcatccatgccagatgctatggaactgccagaaaatgatgaaagtgaacag
atggaaaataatgatataaaattaatggcagtagatacatatgcttctgagtctgagaaa
ccatctgttcctgaacatttatcacctgaagatagtttatcacaactctctcaagaagaa
actcaagttttagaaaaaattaaagatgaggctgtggagccaccaatggatcttcctgaa
ggaactccaatggaaacattagaggataacgatgaaccaatggttacagattcttgttcg
acttctaccactgttaatattccaattacaacatccatcatgcaaataaaattagaacaa
cctgatgagccaatgaaacaagcaaagattcctgaaccgccagcatcatccgtcaatagt
attaatcttcttgagaaggaaatggatattaaaaaaccagtaattccaatgaaaatggaa
ataaaagacgaacctatcaaaaaagaaagtttgaaacaagaaaagatgaatggtactaga
acagaaaatggagatgattccacggcattaactacgttggctacagctgccttagtttcg
gcagaacaaccaataaaaataaaggctgaacagactgaaaaagaaaaaaaagaagaagaa
tggtatgatgtaggagtaacacaggaatcacgatttactgtacaacattattacttacct
aatgacgaacccttagatataacgcaaccattaactatggatgtttttgaaggaagaaca
aaggttcctttagaacagggaaccatttataaacttagaattgctgctgtgaatagttgt
ggacaaagtgattggagcgaggtatcggcgttcagaacatatgtcccgggattccccggg
gcacctagcgctataaaaattagtaaaacggcagacggtgctcatatttcatgggaacca
ccacctaacagaaacgatggacccattttggaatattctgcctacatagcaatggcaaat
accgcaccaaataataacggagaaccaaagacaacggcgtcgaattcgaacctaacattt
acaaaattttattgcggtacaaacaattcttgttcggtatctaatagttcccttagtgcc
gcttatgttgatactactcgaacaccggccataatatttagaatagcagcacgaaatgtt
aaaggatatgggccagccacgcaagttaggtggttacaacaagcatctgtagcgtcatca
gatcaaactaattttatggagaacaaccctcaagtgaagagacgtggtgtaaatatacgc
ttacaagcaagctccccacagaagaaggtgaaactaaagagaccaagtagctaa
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