Bombus affinis (rusty patched bumble bee): 126918312
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Entry
126918312 CDS
T09368
Name
(RefSeq) transient receptor potential-gamma protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
126918312
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
baff04040
]
126918312
Ion channels [BR:
baff04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126918312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank_3
Ank
Ank_4
Ank_5
Holin_BhlA
DUF6744
Motif
Other DBs
NCBI-GeneID:
126918312
NCBI-ProteinID:
XP_050581998
LinkDB
All DBs
Position
7:9491359..9590682
Genome browser
AA seq
1244 aa
AA seq
DB search
MFSTEGNHDRNIPTIESAYEDEEHGARGARSPGESGLGEEIGAPDDDCADLPLRMDINTI
RGWNSGARSGFLRGIGQRVSFDPEAPPLPPQPARKVDEKVKRHSIHGMIEEENVVRPHQE
MASLSYQEKKYLLAVERGDVASVRRMLQSAHETEMNINCVDPLGRSALLMAIDNENLEMV
ELLIEHKVDTKDALLHAISEEFVEAVEVLLEHEESLHRNGEPHVSRFHRLVYSWEALPSD
TATFTPDITPLILAAHRDNYEIIKILLDRGSTLPMPHDVRCGCDECVTSRREDSLRHSRS
RINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKCEYQELRRQCQDFATAL
LDHTRSSYELEVLLNHDPTGPAFEHGERMHLNRLKLAIKLRQKKFVAHPNVQQLLASIWY
EGLPGFRRKNMVLQALEIVRIGVLFPFFSVAYIIAPHSVVGQTMRKPFIKFICHSASYFT
FLFMLILASQRIESVIGNWMGHDVIEHEPAPTKRGAAPTIVEWFILAWVSGLIWSEVKQL
WDVGLEEYVNDMWNVIDFVTNSLYVATAALRVVAYYRVQKETQKSGSMIELQREQWDTWD
PMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLYVLVLFAFSC
GLNQLLWYYADMEKKRCPTAMAYSGNTNVTTDSNACIVWRRFANLFETAQTLFWAVFGLV
DLESFELDGIKAFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLISERADIEWKFAR
SKLWISYFEEGGTAPPPFNIIPTPKSVWYMGQWLYRKLCGHSRAAKKEHMRTIRRKVKQA
SERDFRYQSIMRNLVRRYVTVEQRKAESEGVTEDDVNEIKQDISALRCELIEILKNSGMN
TSTASGAGTDGSLKELSIGAGGKKNRQKERRLMKGFNIAPQPSGSGSLPPVDEFTASLQQ
VQQENSHEIFGSTLSGIFGPGATPKKSPHHTSTNSVPGLGTSRQSRRIRGSSKKKRWENL
IEAAKVRGRVSRLIGRSRSEDSVYSPASEDGGSRSEGSSDSKSSLETPGPEVQATHHSHH
AHHSHHHEGHHMFAHGLGALVALRKKRKNFSDSRASSGMRSSSGTNPMYPITSVLVSKVS
KKQQLQRASSVPTRGPELGQQPIPPRRHEGTQSQQPSIDTPEGVNANEQPVVPAAPLTPS
TTEESVVASSSLPATMKRNGSATQLQRLPGIEPISGHDVSGGWL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaccgagggaaatcatgacaggaacataccgacgatcgaaagcgcgtacgaa
gatgaggagcatggcgccaggggcgcgagatcccctggtgaaagtggtctcggcgaagaa
atcggtgctcctgacgatgattgcgcagatctacctttgaggatggatattaacacgatc
aggggttggaactcgggcgccaggagcggtttcctacggggcatcgggcagcgcgtgagc
ttcgaccccgaggcaccgccgctgccgccgcaacctgcaagaaaggtcgatgaaaaggtc
aagaggcacagtatccacggcatgatagaggaagagaacgtggtgagaccgcatcaggaa
atggctagtctgtcctatcaagagaagaagtaccttctcgcggtggaacgtggagacgtt
gcttctgtcagaaggatgttgcagagtgctcacgaaaccgaaatgaacatcaactgcgtg
gatccattgggacgttcggcgcttctaatggcgatcgataatgaaaatctggaaatggtg
gagctgctgatcgagcataaagtcgacacgaaggatgcgttgcttcacgccatctccgag
gaatttgtcgaagcggtcgaggtacttctggaacacgaggaaagtcttcatcgaaatggg
gagccacacgttagtcgctttcatcgtctagtatatagctgggaagcgctgccatcggac
accgcaaccttcacaccagacattacacccctgatcttagccgctcatagggataactac
gagattattaagatcctgttggaccgcggatccacgttacctatgccacacgatgttcgt
tgcgggtgcgacgagtgtgtaacatcgaggagagaggattctctgaggcattccaggagc
cgaataaacgcatacagagctctagcatcgccgtccttgatcgctctttcctcaaaggat
cccatcctaactgcgttcgagctctcttgggaacttcggcgactctcgttcctcgagcac
gagtttaagtgcgaataccaggagcttagaagacaatgccaagactttgctactgcttta
ctggatcacactagaagttcctacgagctggaggtactcctaaatcacgatcccaccggg
ccagcgttcgagcacggcgaaaggatgcacctgaaccggctgaaactcgctattaaactt
cggcagaaaaagttcgtggcgcatcccaacgtgcagcagttactcgcatcgatttggtac
gaaggtcttccaggcttccgaaggaaaaacatggtcctccaggcgctggagatcgtcagg
atcggcgtcctctttcctttcttcagcgttgcatacatcatcgcgccccacagcgtggtc
ggccagaccatgaggaaaccgttcatcaagttcatctgtcactcggcctcgtatttcact
tttcttttcatgttgattctggctagtcaaaggatagaaagcgtgatcgggaactggatg
ggtcacgatgtcatagagcacgaaccagcaccgacgaaaagaggcgctgctccgacgatc
gtcgaatggttcatcctggcctgggtatccggcctgatttggtccgaagtaaagcagctg
tgggacgtcggcctcgaggagtacgtgaacgacatgtggaacgtgatcgacttcgttacc
aactccttatacgtagctacggccgcgctcagggtggtcgcttactacagggtgcaaaaa
gaaacccagaagtccggatccatgatcgagctgcaacgcgaacaatgggatacgtgggat
ccaatgctcatatccgagggtcttttctccgccgccaacatattcagctctctgaaactc
gtctacattttctccgtaaatcctcacctcggtccactgcaagtctccctgtctaggatg
gtgatggacatcatgaagttcttcttcctctatgtgctggtgctattcgccttttcctgc
ggtctaaaccagctgctatggtactacgcggatatggagaagaaacggtgcccgaccgcg
atggcttattctggtaacaccaacgtcacgaccgattcgaacgcttgcatcgtttggcgt
agatttgcaaatttgttcgaaaccgcgcaaacgctattctgggccgtgttcggactagtc
gacctcgagagcttcgaactggatggcattaaagcgttcaccaggttctggggcatgctg
atgttcggcacgtactcggtgatcaacatcgtcgtactattgaatctattaatcgccatg
atgaaccattcctatcagttgatctctgaacgtgccgatatcgaatggaagttcgccagg
agcaaactctggatcagctatttcgaggagggtggcacggctccaccaccgtttaacatc
atcccgactccgaagagcgtttggtacatgggccagtggttgtatcggaagctgtgtggc
catagcagagctgccaagaaggagcacatgagaacgatcagaagaaaagttaagcaagca
tcggaaagagactttaggtatcaaagtattatgaggaatttggtgagaagatatgtgacg
gtggagcaaaggaaagcggagagcgagggtgtgacagaagacgacgtgaacgagattaaa
caagatatcagcgctctgagatgcgaattgatcgagattttaaaaaattccggcatgaac
acgtccacagccagtggcgctggaactgacggtagccttaaagagctgtccataggtgcg
gggggtaagaagaatcgtcagaaggagcgacgtctaatgaagggattcaatatcgcccct
caacccagtggaagtggcagtctaccgccggttgacgaatttacagcgtcgctgcaacaa
gtgcaacaggaaaactcccacgagatatttggttcgaccttgagcgggatatttggacca
ggcgccacaccaaagaagagtccacatcacaccagtactaacagcgttccgggactcggt
acgagcaggcagagtcgcagaattaggggaagttccaagaagaagaggtgggaaaacctt
atcgaggcagctaaagttcgaggaagagtctcgaggctaattggtagatctcgttcagag
gattccgtgtactcgcctgcttctgaagatggcggttcaagatcggaaggatcgtcggac
tcaaaatcatcattggagacccctggacccgaagtccaggccacgcaccattcccatcac
gcgcatcattcgcatcatcacgaaggacatcacatgttcgctcatggtctaggcgcgctg
gtggcactccgaaagaaacgaaagaacttctcagactccagggcgtcttcgggaatgagg
agcagcagcggtacgaatccgatgtacccgatcacctcggttctcgtttcgaaagtatca
aagaaacaacaactacagagagccagcagcgtacctactagaggaccggaattgggtcaa
cagccgattccaccgaggagacacgaaggcacgcaaagtcagcagcctagtatcgacaca
cctgagggtgtcaacgctaacgagcaacctgtggttccggctgctccgctgacaccatca
acgacggaggagagcgtggtcgcgagcagttctctcccagcgaccatgaaaaggaacgga
tcagcgacgcagctacagcggcttccgggtatcgagccgatatccggccacgatgtatcc
ggaggatggctctga
DBGET
integrated database retrieval system
