Bombus affinis (rusty patched bumble bee): 126918333
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Entry
126918333 CDS
T09368
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126918333
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
126918333
NCBI-ProteinID:
XP_050582063
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Position
7:complement(1576243..1588819)
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AA seq
1803 aa
AA seq
DB search
MARAFSQAIFAILLLAITIVSDIAEPLYGRERVIPARGSIQRGDMSPTEVSEDRHYWPRQ
IIHSPRGAQIKRKHPCEQSSCYPSTGNLLIGRKNRLAASSTCGLTKPERYCIVSHLKERK
KCFFCDASSPNKQHNIENVVTDKNWWQAENGVENVTIRFDLEAEFHFTHSIIRFKTFRPA
KMLIERSSDFGKTWQVYRYFAHNCEKYFPGVSTEQPQRLTDVICETRYSAVAPSSGGDVI
FRVLPQNLEIDNPYSKEVQNQLKITNLRINMTRLHTLGDDLLDDRAEIREKYYYAIQNIV
IRGSCSCYGHASRCLPLPGVPDEENMVHGRCECTHNTTGLNCEKCQDFYNDLPWKPAVGK
QTNACRPCICNNHTNSCHFDEAVYENSGRVSGGVCDDCQHNTMGKNCELCKPFFYHDVTK
DITHPEACLPCDCDLGGSLDDGICDSITNPLTGGESGRCNCKANVEGRRCDRCKNGFWNF
DPENPEGCQACTCNILGTIDNRGCNMVTGECTCKRYVTARDCNQCLPEYWGLSEDPDGCK
PCDCDPGGSYENSCDVVTGQCRCRPHVSGRTCNQPEQSYYTGSLDFLIYEGELSRASDNC
QVVIREPYRDGRNSTWTGTGFMRALEGSVLNFTIDDIRKSLWYDIIVRYEPVQAGSWENV
QIIIERESPVDPNGPCAEWRPEYDQLYAQLPLRSRSVVVQPSVCLEAGKRYNILLQFRKF
NNHMDTPSASILVDSIVLRPKIDSIPFFKTPVVGELRRQEYEIYHCSDFYNDFNAITNNI
PEVCKKYQNSIGYYVYDGAHSCECNPTGSHSLLCENYGGTCPCKQNVVGRRCDRCAPGTY
GFSPEGCIPCDCDGVGALDNFCDIETGRCKCRPNTYGRTCGQCEPGFWNFPHCQRCECNG
HAESCDSKTGACINCRDYTTGHNCDRCIETYYGDPRIGVDIPCRACPCPGTIDSGHSYAE
SCSLDPVTHDVICECFDGYTGPRCESCAENYFGNPEVPGGSCESCNCNNNTDLRRPGNCD
PETGRCLQCLYNTDGANCQICKAGFYGNALEQDCEDCMCDVLGTDRNAGPCDHRTGQCSC
LPHVIGLLCDSCEENHWRIASGQGCDPCECDAVGSVSDRCNPYDGTCECRPGFGGRRCNE
CQTNYWGNPNVECYPCDCDLTGSASQQCDRETGMCVCHKGIGGEKCDQCDRGYYGNAPQC
NPCGECFDNWDLTLTGLRNKTNLVIEEASRIQKVGTTGVYSQEFDDMVESLDQVQALISN
ASIRSQDLDELNDLAIDLNNKKLESTKKLEEVNNLLENVSQRVNLGDAALKNLKNRTNNL
HQAAADLKENATRLQEENVLGALNVTQQMAEQSRQAEKMANDTSNVLADAERFRKHTESL
LAKNRAFVIEAQERNQESLNKINEVLKNFDGIMPGLNLEMCGDNVTDCSSVCGGAGCGFC
GGLSCDAGAVTKANQALDVAKKQAAEIKNHKDEAEQLLRNMVQVKRDATAARSNAQDAFN
YALRARNLTDTLSKDLADINKRVRNILEEDQPTPAMVRDLANEVLAKNIKLKPDEIKILA
DRIKSIVGSLTDSEKILADTRDDLQLAEKLKNDADRAKEEAIAKQNLANKVVILLSDAQR
AQDRAQAAIDQAERDVRRFENDLEEIAEVTRGAQMQANSTTQTVDSLDARLKQLQTQSVR
NDFVLNEEIRVEARKVADEAQKVDAKTKELAMEYRKADEALNSRANKSKGNILRAKKLLQ
KASELTADTSTKLKDLDGMESVYRDNERMLSDLMAEVDSLNGEMEKYLAEIEQKAQRYKH
CTP
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagcattttctcaggcaatttttgcaatactattacttgcaataactattgtg
tcggatatcgcagagcctctatatggcagggaaagggttattccagccagaggatcaatc
cagagaggagatatgtcacctacggaggtgagcgaagatcgccattattggccaaggcag
atcattcacagtccaagaggcgcacaaataaagaggaagcacccctgcgagcagagctcg
tgttacccctctacaggaaatttattaatcggtcgaaaaaatcgattggccgcatcatct
acttgcggtcttacaaaacctgaaaggtactgcatcgtttcgcatttaaaggagcggaag
aagtgctttttttgcgacgcatcatcgcccaacaagcaacataacatcgaaaatgtagtt
accgataaaaattggtggcaagcggaaaatggcgtggagaacgtaacgatacgcttcgat
ctggaagctgagttccatttcacccacagcatcatccgtttcaaaacgtttagaccggcg
aagatgttgattgaacgatcgtccgattttggtaaaacgtggcaagtgtatcgatacttc
gcgcacaattgcgaaaagtacttccctggagtgtctacggaacaacctcagagactgacg
gatgttatctgcgagacgaggtattccgctgtggcgccatcgtctggaggtgatgttatc
tttagagtattgcctcagaatttggagatagacaacccctactccaaggaagtgcagaac
caactgaaaataacgaaccttcgcataaacatgactaggttgcacactctaggagacgat
cttctcgacgaccgcgcagagattcgagagaaatattactatgccatccaaaacatagtt
attcgcggatcttgttcttgttacggtcacgcgtctagatgccttccgcttcctggagtc
cctgatgaggaaaacatggtgcacggcagatgcgagtgtactcataatactacgggattg
aattgcgaaaaatgtcaagacttctacaatgatcttccgtggaaaccagctgttggaaag
cagacgaacgcttgtagaccttgtatttgtaacaatcacacgaactcttgccatttcgac
gaagctgtttatgaaaattctggaagagtatctggcggtgtttgcgatgactgtcaacac
aatactatgggaaagaactgcgaactctgcaaaccattcttctatcacgacgtgaccaaa
gatattactcatcctgaagcatgtttgccttgtgactgcgacctaggtggttccttggac
gacggtatatgcgattcgataaccaatcctctcaccggaggcgaatctggccgctgtaac
tgtaaagcaaatgtcgaaggtcgtcgttgcgatcgttgtaaaaatggtttctggaacttc
gatcctgaaaatcccgagggatgtcaagcttgcacctgcaacatcctgggtaccatcgac
aatcgtggatgtaatatggtgactggcgagtgtacttgcaagcgttacgttactgctcgc
gattgtaaccaatgtctcccagaatattggggactttcggaagatccagacggttgcaaa
ccttgcgattgcgatcctggtggttcctacgagaattcttgcgacgtagtcactggccag
tgccgctgtagacctcacgtcagcggcagaacttgtaaccaacctgaacaaagctactac
actgggtcgttagactttctcatttacgagggtgaattatccagagccagcgataattgc
caagtggtgataagagagccctatcgtgacggaagaaatagtacgtggaccggaactggt
tttatgagagcgctcgaaggttcagtgttgaatttcacgatcgacgatatacgtaaaagt
ttgtggtacgatatcatcgtacgatatgaaccagttcaggctggatcttgggagaacgtt
caaataatcatcgagagagaaagtccagtggatccgaatggtccttgtgccgaatggaga
cccgagtacgatcaactatacgcgcaacttcctttaagatcgagaagcgtcgttgtacaa
ccatccgtttgtttggaagcagggaaacgatacaatattctgttacaattccgtaaattc
aataatcacatggatacaccgtccgcgtccattttggtcgactctatcgttctgagaccg
aaaatagactccattcctttctttaaaacgcctgtagttggcgaacttcgtcggcaggaa
tacgaaatatatcattgtagtgatttctataacgattttaacgccataacgaataatatc
ccagaagtttgcaagaagtatcaaaatagtatcggttactacgtttatgacggagcacat
tcttgcgagtgtaatccgactggatcgcacagtttgctgtgtgaaaattacggaggcacg
tgtccttgtaaacaaaacgttgttggcaggcgttgcgatcgttgcgcgcctggtacttac
ggatttagtccggagggttgcattccctgtgattgcgacggtgtaggggcgttggataat
ttttgcgacattgaaacaggtcgatgcaagtgtcgaccaaatacttacggtagaacttgc
ggtcaatgcgagcctggcttctggaatttccctcattgtcaacggtgcgagtgtaatggt
catgctgaaagttgtgattccaaaactggcgcctgtataaattgtcgggactacacgacc
ggacacaattgcgatagatgcatcgagacgtattacggtgatcctaggatcggtgtggat
attccatgtagagcgtgcccttgtccgggaaccatagactctggacattcgtacgccgag
agttgttcgctagacccggtgactcacgacgtgatttgcgaatgtttcgatggatacacc
ggtccgcgttgtgaaagctgcgcggagaactatttcggtaatcctgaagttcccggtggt
agctgtgagtcgtgtaattgcaacaataacacggacttacgtcgacccggaaattgcgat
cctgaaactggacgttgtcttcaatgtctctacaacactgatggagccaattgtcagatt
tgcaaggcaggattttacggaaatgctctggaacaggattgcgaggattgcatgtgcgac
gttttgggtacagatagaaacgccggtccttgtgaccaccgaactggacagtgttcatgc
ttgcctcacgttatcggtttactctgcgattcttgtgaagagaatcattggagaatcgcc
agtggccaaggttgcgatccttgcgaatgtgacgcggttgggagcgtttccgacagatgt
aacccgtacgacggtacttgcgagtgcagaccaggtttcggaggaagacgttgtaacgag
tgccaaaccaactactggggaaaccctaatgtcgaatgttatccgtgcgattgcgattta
accggttctgctagtcagcagtgcgacagagaaacaggaatgtgcgtctgtcacaaggga
atcggtggcgaaaaatgtgatcagtgcgatcgtggctactatggaaatgcgcctcaatgc
aacccttgcggagagtgtttcgacaattgggacttgacgctgactggtttgagaaacaag
acgaatcttgtgatcgaagaggcatcgagaattcaaaaggttggaacgaccggtgtctac
agccaagaattcgacgacatggtcgaatctctggatcaagttcaagcattgatcagtaac
gcttccattagaagtcaagatttggacgaattaaatgacttggctatagatttgaataat
aagaaattagaatccaccaagaaattagaagaagtgaacaatcttttggagaatgtcagt
caaagagtaaatctaggggatgctgctcttaaaaatttgaagaatagaacgaacaacttg
caccaagctgctgctgatctcaaagaaaatgcgactagattgcaggaagagaatgtccta
ggcgctcttaacgttactcagcaaatggcggaacagtctagacaagcggaaaaaatggcc
aatgacactagcaatgttctggccgacgctgaaagattccgcaagcatactgagagcttg
ttagctaagaatcgtgctttcgtgatagaggcacaggagagaaaccaggagtcattgaat
aaaataaatgaggtattgaagaactttgatggaattatgccaggattaaatctcgaaatg
tgtggagataacgtgacggattgcagcagcgtctgtggtggcgctggctgtggtttctgt
ggtggactatcttgcgatgcgggtgctgtgaccaaggctaatcaagctctggacgtagct
aagaaacaggctgctgagatcaagaaccacaaggacgaggctgaacagttacttcgtaat
atggttcaagtgaaacgcgatgcaacagcagccaggtcgaatgctcaagatgccttcaac
tacgccttaagagctcgtaatttaaccgataccttgagcaaagatctcgctgacataaac
aaacgagtccgtaacatcttggaggaagaccagcccacaccagctatggtcagagacttg
gccaacgaagtattggctaaaaacatcaaactaaagcccgacgagatcaaaatattagcc
gatcgtattaagagtatcgtcggttccttgaccgattccgagaaaatcctcgcggatact
agggacgaccttcagttggccgaaaagttaaagaacgatgctgacagagcaaaagaggaa
gcaatcgcgaaacaaaatctagctaacaaagtggtaattttattgagtgatgctcagagg
gctcaagatcgagctcaagcagcgatcgatcaagctgaacgcgatgtcaggagattcgaa
aatgacttggaagagatagccgaggtgaccaggggagctcagatgcaggcaaacagcacc
actcagacggtcgactctttggacgctcgcttgaaacaattacaaacgcaatcggtcaga
aacgattttgttttgaatgaagaaatcagagtcgaggcgcggaaagtagctgatgaagcg
caaaaggtagatgctaagacgaaggaactcgctatggaatacagaaaagcggacgaagca
ttgaattcgagggcaaacaagagcaaagggaatatattgagggcgaagaagctcttacaa
aaagcctccgagttgacagccgatacatcgacgaaattgaaggacttggacggtatggag
agtgtttacagagataacgaaagaatgctatccgatttgatggcggaggttgattcttta
aatggagagatggagaaatatttggcggaaatcgaacaaaaagcccaacggtacaagcat
tgtactccttga
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integrated database retrieval system
