Bombus affinis (rusty patched bumble bee): 126918514
Help
Entry
126918514 CDS
T09368
Name
(RefSeq) putative transcription factor capicua isoform X1
KO
K20225
capicua transcriptional repressor
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04013
MAPK signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
126918514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126918514
Transcription factors [BR:
baff03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126918514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
126918514
NCBI-ProteinID:
XP_050582446
LinkDB
All DBs
Position
7:complement(3947660..3992116)
Genome browser
AA seq
1962 aa
AA seq
DB search
MHPAGVTTLPTSTRHISAHSLLSTVRTREVVKMLTAHSEMHEKRDPLGSGQYGAGGGGGG
SLIEEKSTPEQPPPPPAPPQRDPSDPTISAKKLPKKRKFDPSELEEMDKTSNVTRTINNI
VNIRAPNMPLGQSGLVQQATLATRQSPQQQESDCYQVQVSSAHSVVVLPPQSTAVDYSVR
EESLRSRPRPATVAIDLSEWRDHRVLALRDSYYYPGVIRNVVQGEIYIEFDGERKLMRYT
DILGAGRYDVIGDASPSVGQVTLDAKVCIRCPTSNNHIDAAKVFVKGTVCKILTKPKRFV
VKIPREDDQSDSYVVKRADLRLVQPPWWDELEEGLEDCDSSRVEGIEHGYRNSSEPSTAV
PILQLHHTSHHTSHISTHGDTGGYYRTTGTSPLMTLATSAHPATTALSNGSRPYDDLESE
DDLDREDITFPSDADAKLSGSSKRSSMQSRGSTSSLVEQRSITPRSQAATPRSQAATPHR
YKKGDVVATPSGVRKKFNGKQWRRLCSKEGCSKESQRRGYCSRHLSLKGSCLRGPTNTFP
GGKMDGEETSRDSDTSPNYGDRRIAGRFDQDETEAANMLVSLGSSRSATPAFSSPTGQSS
ISPCINQSPVPPLGLNQNNVFMPISSPAHHATPLISPGAKWKHSPTQSTFLTQYQQQVIK
PEPNRVVRSNRPAPTAPVPASIGTSVIRISPVSRGIPGSNLTLSWSEQSPPPRHPSVVTT
IAQQQQGIILQHALTTNNGFSSHSEISEQNPQILKPSHSPHMPLSAPTPQNLTLLHKPLE
QPVDYAQPQTQNQPIYVMQHQHEKKYLVIKNSMDVSAAGHINNQDDKYRPALMNHLGQLP
ATLHQTQCQPPQSPAVSSVHVDKLSVLQASKVATHASSHMDMQRAQPPPTSVVMTTTTEA
SNPPTPTSVFQHVIVQPAHLVQISKTQSSREENSKNNGVLYGNHDVPPAYQPHPPSLLNN
AVRNWKKAFPWQTTVLDQSEVSPPPSALSPPLSAPPIPIGMSTPGEDGSGPGPDPITPAE
EEDDDVFETEPTTPVEVEANANKRRSQSLSALHSKEPQSPLKTKDRIRRPMNAFMIFSKR
HRAVVHQRHPNQDNRTVSKILGEWWYALGPEEKQKYHDLASEVKEAHFKAHPDWKWCSKD
RRKSSTTSFKGSESRGKLNSTGEETDTGPPADDVPLTPRATDEITVPVTTVYNEAPTIDV
INQSHTHRIMEMPLPLENTEPDLKQEEDGNASDEDQMVICEDPQPEIDLKCKDKLTDSDN
DVQDDDAEKKCYTQSRFSPVSGQKREAMNVKQEVTCRPKPIKARIPSTGIETTTKYHHTS
MDKGGSVSVLSSTYPYHSPVNPTGVSGFQPTGGAFITMPISPKVVKPEPVKNEQQYSTQY
SMSNLVASIHENGRNMPKFTAAPVLHSIGSKPMMALFKQQQPLQSLGTILRPLTSAVPYQ
PSFTLTLLDNDLVAVSKPQQGSQYLGPTSPHPRMYCGFNIPISDAGNRNISSQGLVSGNK
METQSVIVSKPYSVSTTSTTSTYRGIGHSITRLAESEKGENQVGNNHAQFYVTNVKSDQE
RKDTVNILLPTTNDKHKQPSTPHTPHTPLSNHGSTEISTNKSYSMDETQLNDIGPSKGPF
MLAPTPAQLGRAPLQRRQSMAMPPTSTAGDHGPLVSQHCDNRPQTNTSQATEQIQQQQNF
SESHASPSPSTKKGSFFKKNVEDGMDRVLEQVNFQEKFSSLPEFKPEDIQSPSAISINTA
GSCGHGSVVTSGLHASNLQSSMQIQSYRKKSAQAPHRPTMNEDDIESDTSISATPKSTSS
VKLTGNTFFGPDFNVDAYRTNTDLVGDVDASSPRTPKTPGGGAGNSVGIGRSENDRGHRK
VLEQRRHLVMQLFQEHGYFPSTQATTTFQAKHSDIFPNKTSLQLKIREVRQKLKANSTPM
SANSLVSPLPVSEPSPNITGPLTAPPTSMGAPHILPVSSSGS
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgcacccagccggtgtcaccaccctcccaacttcaactcgccacatttcagcacacagc
ctcctctcgactgtacggactcgtgaggtggtcaaaatgctgactgctcattctgagatg
cacgaaaaacgggatcccctcggaagcggacaatatggagcaggcgggggtggtggaggc
agtttgatcgaagaaaaatctactccggaacagccacccccgccgccggcgcctcctcag
cgggatccatcggatccaacgatcagtgctaagaaacttccaaagaaacgaaagtttgat
ccatcggagctcgaggagatggataaaaccagcaatgtaacgagaaccataaataatata
gtgaacatacgggcaccgaatatgccactcggtcaatcaggtttagttcagcaggcaacc
ttagcaactcggcaatcgccgcagcagcaagaatccgattgctatcaggtacaggtatcc
tcggcacattcggtggtagttttaccgcctcaaagtacagcagtggattattctgttcga
gaggaatctttacgttctcgtcctcggcctgctactgttgctattgatctcagtgagtgg
cgcgaccacagagtgttagctttaagggattcatattattatccaggtgttattcgtaat
gttgttcaaggagaaatttacatagagtttgacggggaaagaaaactaatgcgttacact
gacattttgggcgcggggaggtacgatgtgataggtgatgcgagcccttcggttggccaa
gtgactttagatgcaaaagtttgtattaggtgtccaacgtcaaacaatcatatcgatgct
gctaaagtgtttgtaaaagggacagtgtgcaaaattttaaccaaacctaagcgttttgtt
gttaaaataccaagggaagatgatcagagtgatagttatgttgtgaaacgtgcggatcta
cggttagtgcaacccccatggtgggacgagctagaagaaggattggaagactgtgattct
tcgagggtcgaaggaattgaacatggctatcgaaattcttcagaaccttcaacagcagtg
ccaattttgcaacttcatcacacttctcatcatacatctcatatatcaactcatggcgac
acaggtggttattacagaactactggtactagccctctcatgactctagccacctctgca
catcctgccactacagcattaagtaatggaagtcgaccgtatgatgatttagaaagcgaa
gatgacttggatagggaagatattacattcccttcggatgcagatgcaaaattgtcaggc
agcagtaaaagaagcagcatgcaaagtcggggaagtaccagtagtttagtcgagcaacgc
agcataactcctcgttctcaagcagccacgcccagatctcaggcggcaacgccacataga
tataaaaaaggtgatgtagtggctacaccaagtggagttagaaaaaagttcaatggtaaa
caatggcgcagactctgtagtaaagagggatgttctaaagaaagtcaacgaaggggatac
tgttctcgtcatcttagtttgaaaggttcttgtcttagaggtccaaccaatacctttcct
ggtggtaagatggatggtgaggaaacatctagagattctgatacttctccaaattatgga
gatagaagaattgctggtcgatttgatcaagatgaaactgaagctgctaatatgctagtt
tccttgggaagctctagatcagcaacaccagccttttcctcgccaactggacaatcttct
atatccccttgtatcaatcaatctccagtaccacctttgggactgaatcaaaacaatgtg
tttatgcctatttcaagtcctgctcatcatgcaactccattaatttcgcctggtgcaaaa
tggaaacattcgcctactcaatctactttccttactcagtatcagcagcaggtgataaaa
cctgaacccaatcgggtggtaagatcaaatcgaccagctccgactgccccagtccctgct
agtataggaacaagcgtgataagaatctctcctgtgagtcgtggaataccgggatctaat
ttaactttgtcatggtcggaacaaagcccaccgccgcggcatccatcagttgtgacaact
atagctcaacaacagcaaggcatcattcttcagcatgcactcacaacaaacaatggcttt
tccagtcactctgaaatatctgaacaaaacccgcaaatattgaaaccatctcattcacct
catatgccactgtctgcaccaacaccacaaaacttgactcttttgcataagcctttagaa
caaccagttgattatgctcaaccacaaacgcaaaatcaaccaatatatgtaatgcaacat
caacacgaaaaaaagtatcttgtgatcaaaaatagtatggatgtgtctgcagcaggccat
ataaacaatcaagatgataaatatagaccagcattaatgaatcacttaggtcagcttcca
gcaacgttacatcagacgcaatgccaacctccacagtcacctgctgtttcatccgtccat
gttgataaattatccgttttacaagcgagtaaagtagctacacatgcatcctctcatatg
gatatgcagagagcgcaaccaccacctacgagcgttgtgatgacaaccactactgaagct
tcaaacccgcctaccccaacaagtgtcttccagcatgtaattgtacaacccgcgcacttg
gtacaaatttctaaaacacaatcgtctagggaagaaaattctaaaaataatggagttctg
tatggcaaccatgatgtacctcctgcataccagccccatccgccatcattactgaacaat
gcagtgcgcaactggaaaaaagctttcccttggcagacaacggtactggatcagtcagaa
gtaagtcctccaccatctgcattaagtccacctttgagcgcgcctccaattccaattggc
atgagtacgcctggtgaagatggatctggaccgggtccggatcctataactcccgctgaa
gaagaagatgacgatgtttttgaaacagaaccgacaactcccgtagaagttgaggctaat
gctaataagagacgcagtcagtcccttagtgcattgcattctaaagagcctcagagtcca
cttaaaactaaagacagaatacgccgaccgatgaacgcatttatgattttttctaaacga
catcgtgcagtggtgcatcaaagacatccgaaccaagataatcgtactgtgtccaagata
ttgggagagtggtggtatgccttaggtccagaagaaaaacaaaaatatcatgatcttgca
tcggaggtgaaagaagcacattttaaagcgcatccagattggaaatggtgtagcaaagat
agacggaaatcttcaacgacaagtttcaaaggtagtgaatcccgagggaaattgaacagt
actggggaagaaacagacacgggaccaccggcagacgatgtaccattaacgccaagagct
acagacgaaattactgttcccgttactactgtatacaatgaagctcccacgatcgatgtt
atcaatcagtcgcatactcataggataatggaaatgcctctgccacttgaaaatacagaa
cctgatttaaaacaggaggaagatggtaatgcatcagatgaagatcaaatggtaatctgt
gaagatccacaacctgaaatagatttaaagtgcaaagataaactaacagatagcgataat
gacgtacaagatgacgatgctgaaaaaaaatgttacacacaatcacggttttcacctgta
agcggtcagaagagggaagcaatgaatgttaaacaagaagtaacctgtagacctaaaccg
ataaaagcacgaataccttcaacaggtattgagacaacaacaaagtatcatcatacttct
atggataaaggaggaagcgtttcggttctatccagcacatatccttatcatagccccgtc
aatccgactggagtatcaggttttcaacctactggtggtgcttttattaccatgccaata
tctccaaaagttgttaaaccagaaccagtgaaaaatgaacaacagtatagtacccaatat
agtatgagcaatttggtggcgagcattcatgagaatggaagaaatatgcctaaatttacg
gctgctccggtattacattccattggatcgaaacctatgatggctctgtttaaacaacag
cagccgttgcagtctttaggcactattcttcgcccccttacttcagctgtcccttatcaa
ccatcgttcactctaacattgctcgataacgatttggtggctgtttccaaaccgcagcag
ggatcgcagtatcttggtccaacatcacctcatccccggatgtactgtggattcaatata
ccaatctctgatgctggcaatcgcaacatatcctcacaaggtttagtttctggtaataag
atggaaacccaaagtgtcatagtgagcaaaccatactcggtttcaacaacttctactacg
tcgacttatcgaggaattggtcattcaataacacgtcttgcagaatcagaaaaaggtgaa
aatcaagtagggaataatcatgcccagttttatgtaaccaatgtaaagtctgatcaggaa
agaaaagataccgtgaatattcttctgcctactacgaatgataaacataaacagccatct
actccacatactccccatacaccactcagtaaccatggtagtactgaaatttccacaaat
aaatcatattccatggatgaaacacagcttaatgatataggcccaagtaagggtcctttt
atgcttgctccaactccagcacagcttggccgagcaccgttacaaaggagacaatcaatg
gcaatgcctcccacatcaactgcaggagaccatgggcctctggtgtctcaacattgcgac
aatcgtccacaaacgaacacatctcaagcgacagagcaaatacagcaacaacaaaatttt
tcagaatctcatgcttccccgtcaccatctactaaaaagggttctttcttcaagaaaaat
gtcgaagatggaatggaccgagttctcgagcaagtgaatttccaagaaaaattttcgtcc
ttaccagaatttaaaccagaagatatacaaagtccaagtgcaatcagtatcaatacagct
ggttcctgtggtcatggttcagtagtaacatctggcttacatgcttcaaatttacagtca
tcaatgcaaatacaaagttatcgaaaaaaatctgcacaagcacctcataggcccacaatg
aatgaggacgacatcgaatctgatacgtcaatatctgctactccaaaatcaacttccagt
gtcaaattgacaggaaacacgttctttggtccagatttcaatgttgatgcatatagaact
aacaccgatctagtgggagatgttgatgctagctctcctaggacaccaaaaacgcctgga
ggaggtgctggaaactctgtaggaattggcagaagcgaaaatgaccggggtcataggaaa
gtactagagcaacgtcgacaccttgtaatgcaattatttcaagaacacggttactttcct
tcaacgcaagctactacaacttttcaagcaaaacattcagatatatttcctaataagaca
agtttgcaattaaagattagagaggtcaggcaaaaattaaaagctaactcgacacctatg
agtgctaacagtctagtgagtccactacctgtctctgaaccttcacctaacataactgga
ccattgactgctccccctacgtcgatgggagctccacatatactgcctgtaagcagtagt
ggtagctag
DBGET
integrated database retrieval system
