Bombus affinis (rusty patched bumble bee): 126918583
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Entry
126918583 CDS
T09368
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03022
Basal transcription factors
baff03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126918583
09124 Replication and repair
03420 Nucleotide excision repair
126918583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126918583
03036 Chromosome and associated proteins [BR:
baff03036
]
126918583
03400 DNA repair and recombination proteins [BR:
baff03400
]
126918583
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126918583
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126918583
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126918583
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126918583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
DEAD
ResIII
AAA_11
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
126918583
NCBI-ProteinID:
XP_050582595
LinkDB
All DBs
Position
7:complement(14666446..14669884)
Genome browser
AA seq
759 aa
AA seq
DB search
MKISVDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM
LENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETGSKPKIVGLVLSSRKNMCIHPE
VSREREGKIVDGRCHSLTASYVRERHNYDESTPICNFYEGFDMEGKEQFMPPGIYSIDDL
KEYGRDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNID
NVCIDSMSVKINRRTLEKSSANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARE
TDIILANPVLPDEILQEVVPGNIRNAEHFVGFLRRFVEYLKTRLRVQHVVQESPAAFLRD
VQTKVSIERKPLRFCAERLASLLRTMEITDLTDFSPAILVTHLATLVSTYTKGFTIIVEP
FDDKTPNVLNPILHFVCLDSSIAIKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS
FTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT
SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIRACENGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFSRMDKRSKLPKWIQEHLTDSLCNLSTEEAVQISKRW
LRQMAQPFTRENQLGLSLLTREQLEKEEYGKIEQKAQQN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagcgttgacggcttacttgtatattttccttacgattacatttatccagaa
caatatgcatatatgctcgagctcaaacgtggcctggatgctaaagggcactgtttattg
gaaatgccatcgggcactggcaaaactataactttgttatcattgattgtagcatatatg
ttggaaaatccattggatgtgacaaaattaatttattgttcccgtactgtaccagaaata
gagaaagtcatagaagaattaaaaaaacttatggattattatgaaaaagaaacaggaagt
aaacctaaaattgttggcttagttcttagttcacgaaaaaatatgtgtattcatccagag
gtaagcagagaacgtgaaggcaaaattgttgatggtcgttgtcattctctcacagcatca
tatgttcgtgagagacataactatgatgaatcaacaccaatttgtaatttttatgaagga
tttgatatggaaggtaaagaacaatttatgccaccaggaatatattctattgacgatttg
aaagaatatggaagagaccgcaattggtgtccatattttcttgcaaggtttacaatttta
catgcccagattgtagtgtacagttatcattatttattagatcccaagattgcagaaact
gtgtcaaaagaattaagcaaaagttctgtagtagtatttgatgaagctcacaatatagat
aatgtatgcattgattcaatgagtgtaaaaattaatagaagaactttagaaaaaagttca
gccaatatacaacttcttgagaaaacagtggctgagatgagagaggatgatgtaaataaa
ttaaaagaagaatatgagagattagtagaaggattaaaagatgcacatgttgcaagagaa
acagatattatcttagctaatcctgtcttaccagatgaaattttgcaagaggtggtccct
ggtaatattagaaatgcagaacattttgtcggttttttaagacgatttgtagaatattta
aaaacgcgtctacgtgtgcaacacgtagttcaagaatcacctgctgcgtttctgagagat
gttcaaacaaaagtttcaatagaacgtaaaccattaagattttgtgcagaacgactagct
tctcttttacgtactatggagataaccgatttaaccgatttttcacctgccatattagtg
acacatctggcaacattagtatctacatatacaaaaggatttacaattattgtggagcca
tttgatgacaaaacacctaatgttttaaatccaattcttcattttgtttgtttagattca
tccattgcaataaaacctatatttgatagatttcagtcagtagtaattacttcaggaaca
ttgtctccattagacatgtatcctaaaattttaaattttcatccagtcataatgtcatct
tttactatgacattagccagaccttgtctcttaccgatgattgtagcgaaaggtaacgac
caagttgcaatttcatcaaagtatgaaacaagagaagatgttgctgttataagaaattat
ggtcaactattagttgaattcgcagctactgttcccgatggtttagtctgcttttttacc
tcctacttatacatggaatctgtcgttgctgcatggtatgaccaaggtgtggtagatcaa
cttcaaagacacaaattattatttattgaaactcaggattctgcagaaacgagtttagct
cttataaattacatacgagcatgtgaaaatggaagaggtgctgttctcctttccgttgca
cgtggcaaagtatcagaaggagttgattttgatcatcatttgggaagagctgttttgatg
tttggaattccttatgtgtatacacaatcgcgtattttaaaagcacgattagaatatctt
cgtgatcaatttcaaatcagagaaaatgattttttaacttttgatgcaatgagacacgca
gcacaatgcgttggaagagcaattagaggaaaaactgattacggtataatggtatttgca
gacaagaggttttcgagaatggataaacgaagtaagttaccaaaatggatacaagaacat
ttaactgatagtttgtgtaatttatcaaccgaggaagctgtgcagataagtaaacgttgg
ttacgacaaatggcccaaccatttacacgtgaaaatcagttgggattatccctattgaca
cgagaacaacttgaaaaagaagaatatggcaaaattgaacagaaggcgcaacaaaattag
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integrated database retrieval system
