Bombus affinis (rusty patched bumble bee): 126918708
Help
Entry
126918708 CDS
T09368
Name
(RefSeq) homeobox protein SIX3-like
KO
K19473
homeobox protein SIX3/6
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126918708
Transcription factors [BR:
baff03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
126918708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
126918708
NCBI-ProteinID:
XP_050582881
LinkDB
All DBs
Position
7:14528244..14580667
Genome browser
AA seq
474 aa
AA seq
DB search
MSAVAPAGTGATAPTTNGPIVPAPVFALPTLSFTVGQVATVCETLEESGDIERLARFLWS
LPVAHPNIQELNQSEAVLRARAIVAFHSGHYRELYAILERHKFTKDSHGKLQAMWLEAHY
QEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPG
KKRELAAATGLTPTQVGNWFKNRRQRDRAAAAKNRMQQQSGTGNGSTRRALSPGPGASDS
EDSDISLGGTSPASPSSSPPPTHQPSPVPLGPLGPLPPPSLNFRFDPSQSQFRFNHATAF
KFPPAGFRFGPHSPQHNHPNISGGGIFRLTETSPFQAVGPRGDLGSRLPDPLGLPPPRLH
PHDSLLHHPQIQHQLPEGMSRISEGSRLSDGGISRLSDSLSEAHSPPLMATNLSVTGPLR
VAVPSPHTPSSRGSPTASQQTPQGQSQGQGLIRVATPPPLNPKPPQIHRPFSPA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgttgcaccagcgggcaccggtgccacagcgcccacgaccaatggtccgatc
gtaccggctcctgtttttgcattgccaacgttatcgttcaccgtcggccaggttgccacc
gtctgcgagaccctcgaggaaagcggcgatatcgagagactggcgagattcctctggagc
ctgccggtagctcatccaaacatccaagagttgaatcaaagcgaggccgtactgagagct
agagcgatcgtcgcgtttcattcgggccactatagagaattgtacgccatactggagagg
cacaagttcaccaaggactctcatggtaaacttcaggcgatgtggctggaggcgcattac
caagaagctgagaagcttcgtggaagaccactgggtccggtggataagtacagagttcga
aagaaatttccgttgccgaggacgatctgggacggagaacagaagacccattgcttcaag
gagagaaccagatcgttgctgagagaatggtatcttcaggatccgtatccgaatcccggg
aaaaagagagaattggctgctgccacggggctcacgccgacccaagttggaaattggttc
aagaacagaaggcaaagagatcgggctgctgctgcgaaaaatagaatgcagcagcaatct
ggtacaggaaacgggagtacacgacgcgctctgagtcctggaccaggagccagcgattca
gaggattccgacatctcgcttggtggaacgtcgcctgcgtcgccgagttcctcacctccg
ccaactcatcaaccatctcctgttcctctcgggcctctaggtcctctacctccaccatcc
ttaaatttccgcttcgatccttcgcaatcgcagtttcgattcaaccacgcgacggccttc
aaattcccgccggcgggtttccgatttggaccgcacagcccgcaacacaatcatccgaac
atctctggcggtggaatcttcaggctgacggaaacgagcccgttccaagctgtgggaccg
agaggtgatcttgggtcgagactaccggatccactgggtctaccaccgccgaggttgcac
ccacacgacagcttgctccatcatccgcaaatacagcatcagctaccggaaggaatgtcg
aggatatcggaaggctcgcgtctctccgatggtggaatttcgcgcctgtcagacagccta
tcggaagctcacagcccgccattaatggcgacgaacttgtctgtgacgggtccgctaagg
gttgcagttccgagccctcacacgccttcctcgcggggtagtccaacggccagtcaacag
actccccagggtcagtctcaaggccagggattgataagggtggcgacaccacctccactg
aatccgaaaccaccgcagatccacagacctttctcgccagcgtga
DBGET
integrated database retrieval system
