Bombus affinis (rusty patched bumble bee): 126918741
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Entry
126918741 CDS
T09368
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126918741
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126918741
Spliceosome [BR:
baff03041
]
Complex C
Other components
Complex C specific factors
126918741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126918741
NCBI-ProteinID:
XP_050583033
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All DBs
Position
7:5884943..5894454
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AA seq
684 aa
AA seq
DB search
MNTKPTFSKPGDSMWQEDKPDTEAHSSTQFVYNAHHSLALNMQRQRLPTFKYRSHIIYLL
EKYQTLVLIGETGCGKSTQLPQYLLEAGWCTDGKMIGITEPRRVAATSLSNRVADERNCI
LGTEVGYSIRFDNYTDETTKIKYMTEGILLRELMSDPLLTSYSVIVVDEVHERTLLTDII
MGLLKKIIRKRKSLRIVVCSATVDAEQLRDFFNTNTTKDSAKDTAIILTVEGRLYPVDIF
YIIEPVANYVTSVIDTALKIHENEEPGDILAFLTGLDEVDQAVSLLSEHAKLIKEGKQKL
LPLAMYGSLPNSEQLKVFWRAAKDTRKVIVATNIAETSITIPNIVYVIDCGFVKIPWYEA
ETQTNSLVIVPVSKASANQRAGRAGRVRTGKAYRLYTKEAYSELFEATPPEMQRSDLAPA
IIQLKALGIDNVLRFNFPSAPPSKNLLTGLELLYALGAIDSNGELTTPLGVTMAEMPLEP
VLAKSLIVSGEMGCSEELSTILAMLQVQNVFVRPAGGQAAIKARIAHRKFEVEEGDLLTL
LNVYTAYEKNRTLSWCQKQFLNNKALRRVTEIRTQMHSMMKKLDIPLVSANGNLQQILKC
ITAGLFPKAAYLHYTGVYKTVRGNKDLYIHPNSCLYTLQQPQWLLFYEVLQTNKTYIKDI
TVIQPEWLLELAPHFYEKTSLDPI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaaccgactttttctaaacctggtgatagtatgtggcaagaggataaacca
gatacagaagcccattcgtccacacaatttgtatacaatgcgcatcattcacttgcactt
aatatgcaacgtcaacgattgcctacatttaagtatagaagtcatattatatatttactg
gaaaaatatcaaacattagtcttaatcggtgaaactggatgtggaaagagtacgcagtta
cctcagtatcttcttgaagcaggatggtgtacagatgggaaaatgattggcatcacggaa
ccaagaagagttgcggctacatctttatctaatcgtgttgctgatgaacgcaattgtatt
ttaggcaccgaagttggttattctatacgtttcgataattatacggatgaaacgacaaag
atcaagtatatgacagagggaattctgcttcgtgaattaatgagcgatcctttgttgaca
agttattctgtaatcgtggtggatgaagtacatgaaaggacccttcttacggatattatt
atgggacttctgaaaaaaataatccggaaacgaaaaagtttacgaattgtcgtttgttcc
gctacggtcgatgcagaacagcttcgagattttttcaatacaaatacaacgaaggattcc
gcaaaagatactgcaattatacttaccgtcgaaggtagactttatccagtggatattttc
tacattatagagccagtagctaattacgtgaccagtgtcatagatactgctttaaaaatt
cacgaaaatgaagaacctggtgatattctagcgtttcttacgggtttggacgaagtagac
caagcagtttctcttttatcagagcatgcaaagctcataaaggaaggcaagcagaaactt
ttacctctagctatgtatggatctcttccgaactcagaacaactgaaagtattttggagg
gctgccaaagacactcgtaaagttatcgtagccacaaacattgcagaaacatctatcact
attccaaatattgtttatgttattgattgtggctttgtaaaaattccatggtatgaggct
gaaactcagacaaattctctcgtaattgttcctgtgtccaaagcatccgcgaatcaacgt
gctggtcgagcgggtcgtgtccgaacaggaaaagcatatagattgtacacaaaggaagca
tactcagaactatttgaggcaacgccaccagaaatgcaacgctcggatttagcaccggcg
atcatacaattgaaagctttaggaattgataatgtattaagatttaattttccttctgct
ccaccaagtaaaaatcttcttactgggctggaattactttatgcattaggagcaattgac
agtaatggagaattaacgacaccattgggcgtaacaatggcagaaatgccattggagcct
gttttggcaaaatctcttatagtatcaggtgaaatgggatgttccgaagaattatcaacg
attttagctatgcttcaagtacaaaatgtttttgtaagacctgcaggaggccaagctgct
ataaaggcaagaatagcgcatagaaaattcgaagttgaggagggagacttattaacgttg
ctcaatgtatatactgcttatgagaaaaatagaacacttagttggtgtcaaaaacagttt
cttaataacaaagctttacgcagagttacggaaattcgaacacaaatgcattctatgatg
aagaaattagatataccgttggtttcggctaatggaaatttacaacaaattctaaaatgt
ataactgctggacttttcccgaaagcggcgtacttgcattacactggagtatataaaaca
gtacgtggaaataaggatttgtatatacatccaaatagctgtttatatacacttcagcaa
cctcaatggttactattttatgaagttttacaaacaaacaaaacgtatataaaggacata
actgtgatacaaccagaatggttattagaattagcgcctcacttttatgaaaaaacatct
cttgatcctatttaa
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