Bombus affinis (rusty patched bumble bee): 126918812
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Entry
126918812 CDS
T09368
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
baff03009
]
126918812
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
90S particles
Other 90S particles
126918812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Cytochrom_D1
Beta-prop_LRRK2
WD40_like
Beta-prop_WDR35_TULP_N
WDR93
Beta-prop_NWD2_C
WD40_2
DUF2262
Motif
Other DBs
NCBI-GeneID:
126918812
NCBI-ProteinID:
XP_050583178
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Position
7:complement(16316390..16318560)
Genome browser
AA seq
455 aa
AA seq
DB search
MSFFIRNKQGSGGIKRKFNGYTKTKGKTKKINKSIPDDNESIASTDEELAEENQRRNEEY
ESEEEEETAQEKRVRLAKKYLRHIEEEERDRAEFEEGAVARRLQEEYLEEKGRLRKTVAS
NYINHGEPIVLKCKEHKSSITCLCLSSNGKFLYSGSKDGSLVKWCLKERAKLKAVKGKRK
SEAGMKCVQCLAISTDGKFLVAGDSGCKHILVFCGDTLNHIKNLQGHRDSVTSLVFRRDT
HTLYSGSKDRSVKVWNLSDMAYVESLFGHQNGVTSIDALARERAITSGGFDGTIRIWKIV
EESQLIFNGHGGSIDTVKLINEEHFFSCGDDGQLCVWGCLKKKPLCSVADAHGRDESNNQ
PMWISSIATLLNTDLVASGSRNGVIRLWQCGDSFRSLNPLFEIQLTGFVNALCFTSDGTR
LIAGIGQEHRLGRWWRISEAKNSIVIIPLIQTKNK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttttattcgaaataaacaaggtagcggaggaattaaaagaaagtttaatggt
tatactaaaacaaaggggaaaacaaagaagataaataagtctatacccgatgataatgaa
agtattgccagtacagacgaagaacttgcagaagaaaatcagagaagaaacgaagaatat
gaaagcgaggaagaggaagaaactgctcaggagaagcgtgtaagactcgcaaagaaatac
cttcggcacatcgaagaggaagaaagagatagggcagaatttgaagaaggagcagtagca
agaagattgcaagaggaatatttagaagaaaagggaaggttacggaagactgtagcttca
aattatatcaatcatggtgaaccaattgttctaaaatgtaaagaacataaaagttcaatt
acctgtttatgtctctctagcaatggaaagtttttatattctggttcaaaggatggtagt
ttagttaaatggtgcttaaaagaaagagcaaaattgaaagccgttaaagggaaaaggaaa
tcagaggctggaatgaaatgtgtacaatgtttggcgattagtaccgatggtaaatttttg
gtagcaggagatagcggttgtaaacatattctagtattttgtggagataccttgaatcac
ataaaaaacttgcaaggtcatagggatagcgttaccagtttagtattccgtagagatacg
cacacgttgtattccggttctaaagatagaagcgtaaaagtatggaatttaagtgatatg
gcatatgttgaatctttatttggacatcaaaatggtgttacatcgatcgacgcgcttgcg
cgtgaacgagctataactagcggtggtttcgatgggacgatacgaatttggaaaatcgta
gaagaatcgcaacttatattcaatggacatggtggtagcatagataccgtaaagcttata
aacgaagaacacttttttagttgtggagacgatggacaattatgcgtttggggttgttta
aagaagaaacctttgtgttcggtggcagacgcacacggaagagatgaaagcaataatcaa
ccaatgtggatctcgagtatagctactttactcaatacagatctagttgcatcaggatca
cgaaatggcgttatcagattatggcaatgcggtgattccttcagatcattgaatccgcta
tttgagatacaattaacagggttcgtcaatgcgctatgtttcacttcggatgggactcga
cttattgctggaattggtcaagaacacagacttggaagatggtggcgcatatcagaagca
aaaaattctatagttataataccgttaattcaaacaaaaaataaatag
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