Bombus affinis (rusty patched bumble bee): 126918856
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Entry
126918856 CDS
T09368
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126918856
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
126918856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_19
TPR_8
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_10
TPR_Slam
TPR_7
TPR_9
ARM_TT21_4th
TPR_MalT
PknG_TPR
ANAPC3
TPR_21
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
126918856
NCBI-ProteinID:
XP_050583249
LinkDB
All DBs
Position
7:complement(12200196..12206272)
Genome browser
AA seq
1292 aa
AA seq
DB search
MAGSIEIPLRDTDEVIELYLDQLPEGDEVLGILRQEHAQLNIWVNLALEYYKQHKIEDFI
KILESSRTDANIDYRDYEKDQMRGLDMLAAYYVQEANREKNKDKKRDLFTKATLLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRG
ALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLSVL
KLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTEN
EAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPHFGLGQMYVYRGDAENAA
QCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIELAQI
LEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEESLARS
KADALHDSVYYNSIAVTTTYNLARLNEALCIFDKAEKLYKAILKKHPNYVDCYLRLGCMA
RDKGQIYEASDWFKDALSINNEHPDAWSLLGNLHLVKMQWGPGQKKFERILKNPATSTDA
YSLIALGNIWLQTLHQSGKDKDREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKG
CVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQ
YLGRAYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQ
AVHELGLSHKYFQYLSTHGDKMGQLAEAETRRCQDLLSQAQYHVARARRLDEEEKMLRRK
QEEERQAFKMRQTEEQRKLEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPSEKPGRKGR
KVRTDQYVSDSGGSGREEGREEAPRERKRKRKASGERKEKRAKGRAKRKKEMGSGESGSE
SDRPKPKRGRKGIIKKDRAFRKSTAETAKGKMPLSKETISTSESDSDSGGLKIASGGESG
NEGRGRGNRRIMSDSEGSRASRSRSRSRSKLRSRSRSSSRSRSRSRSRLRLRSRSRSQLR
SRSRSRFQSRSVSRSRSRSRSGSKSRSQSRSKSPSRSRSVSAKSGSRSRSRSGSRKSQSR
SRSRSGSRKSGSQPRSRSGSAASARSRSGSAASARSRSGSARSRSGSAASARSRSRSPSG
SRKAASRSRSRSGSRSGSQSEGRISRSRSRSKSKSVSRSRSRSGSRSKSGSRSRSPSGSA
RSATPESRKSVSGSDVGSRHSSTDRGGGSESE
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttccatagagattccacttcgtgatacggatgaagtaattgagctatacttg
gatcaattaccagaaggagatgaggttcttggtattttacgtcaagaacatgcacaactt
aatatttgggtcaatttggctcttgaatattacaaacaacataaaatcgaagatttcatt
aaaatacttgagtcttctcggactgatgctaatattgattaccgtgactatgaaaaagat
caaatgcgtgggttggatatgttggctgcatattatgtgcaggaagccaacagagaaaaa
aataaggacaaaaagagagatctatttacaaaagctaccctattatatacaactgcagat
aagattattatgtatgaccagaatcatttacttggcagagcttatttctgcctcctggag
ggagataaaatggatcaggctgatgcccaatttaattttgtactaaatcaatctccaaat
aatattccttccctactgggaaaagcatgcatagcgtttaacaaaaaagattatagaggt
gcacttgccttttataagaaggcattgagaacaaatccaaattgtccagctgctgtaagg
ttgggaatggggcattgttttatgaaattaaataaccaggaaaaagcacgtttagcgttt
gaaagagctttacagttagatggccaatgtgttggagcattagttggactttcagtactg
aaattaaatcaacaacagcctgatagtattagaactggtgttcaaatgttatctaaagct
tataccattgattcgactaatcccatggtgttgaatcatttggcaaatcattttttcttt
aaaaaggattataacaaagtacagcacttagccctccatgcatttcataatacagagaac
gaggctatgcgtgcagagagttgctatcaattagccagagcatttcatgttcagggtgac
tatgaccaagcgtttcaatattactatcaggcaacacaatttgcacctccagtttttgta
ttaccacactttggcttaggtcaaatgtatgtttatcgtggtgatgcagaaaatgcagca
caatgttttgaaaaagtgttgaaagctcagccaggtaattatgaaacaatgaaaattctt
ggatctctgtacgcaaactcaagttctcaatcgaaacgcgatattgcaaaaaaccatctt
cgtaaagtaactgaacaatttccggatgatgttgaagcatggattgaattggctcaaata
ttggagcaaagtgaccttaatgcagccttaaatgcatatggtacagcaactagaatttta
aaagaaaaagtccaggcagatataccaccagaaattctaaataatgttggtgctctacat
tatagacttggaaacttagaagaagctaggaaaaatttagaggaatctttagcgcgttct
aaagctgatgccttacacgattctgtatactataactcaattgcagttacgacaacatat
aatttagctcgtttgaacgaagctttatgtatatttgataaagcagaaaaattatacaaa
gccattttaaagaaacatccaaactatgtagattgttatttacgacttggctgtatggct
cgagacaaaggacaaatttatgaagcgtctgattggtttaaggatgctttaagcataaat
aacgagcacccagatgcatggtctcttttgggtaacttacatttggttaaaatgcaatgg
ggtcctggccagaagaaattcgaaagaattttaaaaaatccagcaacaagtaccgatgcc
tattctttgattgctttgggtaacatttggttgcaaacattgcatcaaagtggaaaagat
aaagatcgagagaagcgacatcaagacagagcattggctatgtacaaacaggttttgcga
aacgatcctaaaaatatttgggctgcaaatggaataggagctgtactagcgcataaaggt
tgtgtaaatgaagctagagatatttttgctcaagttcgagaagcaacagcagaattttgc
gatgtatggttaaatattgcgcacatttatgtagagcaaaaacaattcgttagcgctatt
caaatgtatgaaaactgccttcggaagttctataaatatcatcatgtcgaagttttgcaa
tatcttggaagagcttactttaaagctggtaaattaaaagaagcaaaattgacattatta
aaggcaagaagagtagctccacaggacaccgttttgttatacaatattgcacttgtgctt
caacgtctagcgacacaaattttgaaggatgagaaatccaccttaacaacagtactccag
gcagttcatgaattgggactctcacataaatatttccaatatctatcaacgcatggagat
aaaatggggcaacttgcagaggcagaaacaaggaggtgtcaagatcttttatcgcaagcc
caatatcatgttgccagagctagacgattggacgaggaagaaaaaatgcttaggagaaaa
caagaagaagaaagacaagcatttaaaatgcgacaaacagaagaacaacggaaacttgaa
gagatgcgacgacaaaaagaagaagaaatgttacagaaacgtcaagagtacgttgaaaag
acaaagaacgctttagtattcggtgaaatgccttcagaaaaacctggaaggaaaggaaga
aaagtacgcactgatcaatacgttagtgacagcggtggttctgggagagaggaaggtcgg
gaggaagctcctagagaaaggaaacgcaaaagaaaagcaagtggtgaacgtaaagaaaaa
agggctaagggtagagcaaagcgcaagaaagaaatgggaagtggagaaagtggttcagaa
agtgatcgacccaagccgaaacgtggaagaaaagggattattaagaaagacagagcattt
cggaaaagtacagctgagactgcaaaaggaaagatgcctttatcgaaggaaactatatcg
actagcgaatctgatagcgattcaggaggtcttaaaatcgccagcggaggtgaaagcggt
aatgaaggtcgcggacgcggaaatagacgaattatgtctgactcagaaggatcccgtgca
tcgagatctaggtctcgttccagatcgaaacttagaagccgttctagaagtagttcacga
tcgcgatcacgatcgcgatcacgattgcgattgcgatcacgatcacgatcacaattgcga
tcacgatcacgatcaagatttcaatctcgatccgtatctcgttcacggtctagatctcgt
tcaggttctaagtcgagaagtcaatcgcggtcgaaaagtccgtcgagatcaagatccgtt
tcagcgaaaagtggttcacgctcgagatcaagatcagggtcgcggaagagtcaatcgcga
tcaagatcgcgtagtggttcgaggaaaagtggatcgcagccaagatcaaggtcgggttct
gcagctagtgcacgatcaagatcgggttctgcagctagcgcacgatcgagatcaggctct
gcacgttcgagatcgggatctgcagctagtgcacgatcgagatcaaggtctcctagtggt
tccagaaaagcagcttcgcgatcaaggtcaagatcaggatcaaggagtggatcacagtcg
gagggacgtatatcaagaagcagaagccgatcaaaatctaaatctgtgtcaagatctaga
tcacgttccggctcacggtcaaagagtggctctcgaagtcgcagccctagtggatcggca
agatctgctaccccagagtcgagaaaatcagtttcgggcagtgatgttggttcccgccat
tcgagtacagatcgaggaggtggcagcgaaagcgaataa
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