Bombus affinis (rusty patched bumble bee): 126918948
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Entry
126918948 CDS
T09368
Name
(RefSeq) nucleolar protein 6 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126918948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
baff03009
]
126918948
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
126918948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
126918948
NCBI-ProteinID:
XP_050583516
LinkDB
All DBs
Position
7:10373091..10377768
Genome browser
AA seq
1174 aa
AA seq
DB search
MKIPYKANINDFLNHSGNLAFENDHHSNDEIDEDKDYENEESEEDEEMEKIKDINKGGNL
LLVSDKKRRKVTNDSTDILLKKKRKLDNDLYKPPTAEELNQLRETENLFHSNLFRLQIDE
MLNAVRFKDKYKNLFDIWFKKFKGTIESIEETEEYELSDEELGKKLNMHIPMLNVPKVAK
GIFKFLKPTDISIIGSYVFEAAVGSNITVDILIEMPAKMFQKQDYLNYRYIKKKMIYLAY
IASNITDDIAESKRFMNDTLKPVLKIVPSGKLGTKINVLIHISAQEGSFRLSRFLPEKNN
VRPQWFFGETKNITENFVPTPHYNSIILRDLVMKIHAENMKIIREYPNIRDGIILLKIWL
TQRELLKGYAAFNGHIITMLILYLLSIKKLNTFMSSYQIVRNVWNYLIHIDWCESGVSTN
QNEESKDRILKYHEYYDCVFLDSTGYYNITTDLSKATYRWVQKEAELSLNHLDNAHANSF
QSLFMRKVPFYMAFDHFVWFKGAKMLRNLVNINSSDKDKLDYGPNYRAQAIKILCNALKG
GLANRVHQICVLPNKSSEWKCTGNNCDDIGKIFIGLELNPEYCFNIVDKGPEANLPEAIE
FRNFWGEKSELRRFQDGTTREAVVWSKGKTLSGKRLICKKIVTFLLRKKLGIPKKKFVYI
AGEMEELLQLQKVKITHFTYGTGEEAALRVINVFNQLEKDLMSLTDIPLSIHGVQGSSAV
FRYTDVFPPLATIYRPDNQLIKKSKKGLTLSRNITEAPKYVCPLDVSLQLSTSGKWPDEL
EALRNTKAAFHIQIAECLRKQYKLTAEPNFSHIDVYKDGFVFRLRVAHSKEVSCLKQQIT
EDGVIQYKDNEKSIELENKLFELPKLTSALHGLHNQQPSFGLACCLAKRWLSAQLLDNSH
MPDIVVELLVASMYLIPAPYRPPQMPQIAFLRLLESFARGHWNTDPVIVNFNNEMSKDEI
IAVETLFGSSRDSLPPLFISTPYDQQRSLWTKKAPSTLILNRITMLARQCIKLYEHQFFT
KVLLDFKPLFRPPLTEYDCLIYLKPCMVPRRLQAIDVNDSCPIVEWHPYKHHSAQKIPIV
GFDPVQHFLEDLRNGYDEFALFFHDTYGGTVIGVLLRPSALEIKDLKVSNISGRKCNNNN
ELALNISAIIQDFYVLGKGLVEAIDVRSKKFSLT
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccttacaaggcaaatataaatgattttttaaatcattctggcaatttggcg
tttgaaaatgatcaccattctaatgatgaaattgatgaagacaaagactatgaaaatgaa
gaaagtgaagaagatgaagaaatggaaaagatcaaagatattaataaaggaggaaatttg
ctcttggtatctgacaaaaaaagaaggaaggttaccaatgattctacagacattttatta
aaaaagaaaagaaaattagacaatgatttatataaaccaccaactgctgaagaactaaat
caacttagggaaacagaaaatttatttcattccaatttatttagactacaaatagacgaa
atgttaaatgcagttagatttaaggataaatataaaaatttgtttgatatttggtttaaa
aagtttaaagggactattgaatccatagaggaaacagaagaatatgaactttcagatgag
gaactagggaaaaaattgaacatgcatattccaatgcttaatgtaccaaaagtagcaaaa
ggaatatttaaatttcttaagccaacagatatttctattataggatcttatgtatttgaa
gctgcagttggttcaaatatcactgtagatatattgattgaaatgcctgccaagatgttc
caaaaacaagattacctaaactatagatatataaaaaagaaaatgatatatttagcatac
atagcatctaatattactgatgatattgcagaaagcaagagatttatgaatgacacatta
aagccagttttaaaaattgtaccaagtggaaaattaggtaccaaaattaatgtattgata
catatatcagctcaagaaggaagttttagattaagtagatttttaccagaaaagaataat
gttagacctcaatggttttttggagagaccaaaaatattacagagaattttgtaccaaca
ccacattataattcaataattcttcgtgatttagttatgaaaatacatgcagagaatatg
aaaataataagagaatatccaaatataagagatggcattattttattgaaaatatggtta
actcaacgtgaattattaaaaggctatgcagcttttaatggacatatcataacaatgctt
attctatatttattatccataaaaaagttaaacacatttatgagcagttatcaaatagtt
agaaatgtgtggaattatttaatacacattgattggtgtgaatctggagtaagtacgaat
caaaatgaagagagtaaagatagaattttgaaatatcatgagtattatgattgtgtattt
ttggatagcactggttattacaatattactacagatctgtctaaagctacatatagatgg
gtacaaaaagaagcagaactttccttaaatcatttggacaatgcacatgcaaacagtttc
caatcacttttcatgagaaaagtaccattttatatggcatttgatcattttgtatggttt
aaaggtgctaaaatgttaagaaatctagtaaatattaattcaagtgacaaagataaacta
gattatggtcccaattatcgagcccaagcaataaaaattctttgtaatgctcttaaagga
ggactggcaaatagagtacatcaaatttgtgtattaccgaataaaagttcagaatggaaa
tgtacagggaataattgtgatgatattgggaagatttttattgggttagaattaaaccca
gagtattgttttaatattgttgacaaaggacctgaagcaaatttaccagaagccattgaa
tttagaaatttttggggtgaaaaatcagagttacggcgatttcaagatggaactactcga
gaagcagtagtttggtcgaaaggcaaaacattatcaggaaaaagattaatatgtaaaaaa
atcgtaacatttttattaagaaaaaaattaggtatacctaaaaagaaatttgtatatatt
gcgggtgaaatggaagaacttttacaattgcagaaggtaaaaataacgcatttcacttat
ggaacgggagaagaagcagcactgagagtaataaacgtattcaatcaacttgagaaagat
ttaatgtctcttacagacattcctttatcaatacatggggtacaaggatctagcgcggtt
tttcgatatacggacgttttcccaccacttgcaacgatttatcgacctgataatcaactt
attaagaaatctaaaaagggtttgacattatcaagaaatataactgaagcacctaaatat
gtttgtccacttgatgtgagcttgcaattatcaactagtggaaaatggccagatgagtta
gaagctcttagaaatacaaaagccgcttttcacatacaaattgcagaatgcctcagaaaa
caatataagttaacggcagaaccaaacttttcacatatcgatgtatataaggatggattt
gtgtttcggttaagagtggcacattcaaaagaagttagttgcttgaaacagcaaataact
gaggatggtgttatacaatataaagataacgaaaaatcaatcgaattagaaaataagcta
tttgaattaccaaagctaactagtgctttacatggcttacataatcaacaaccatccttt
ggacttgcatgttgtttggcaaaacgttggttatccgctcagctgttagataattctcat
atgccagatatagtagttgaactacttgtagcttcaatgtatttaatacctgcaccatac
agacctcctcaaatgcctcaaatagcattcttgagactcttagaaagttttgcaaggggt
cattggaatacagatcctgttatagtaaatttcaacaatgaaatgtctaaagacgaaata
attgccgtggaaacgctttttggatcatctcgtgattctttaccaccactatttatctct
actccttatgatcaacagagatcattatggactaaaaaagcaccatctactctaatttta
aatcgcattacaatgctggctagacaatgtataaagttatatgaacatcaattttttaca
aaagttctgttagatttcaaacccttatttaggccaccacttacagaatatgattgtttg
atttacctaaaaccgtgtatggttcctagaaggttacaagcaattgatgttaatgattca
tgcccaattgttgaatggcacccatataaacatcattcagcccaaaagataccaattgta
ggttttgatcctgtacaacattttctagaagatcttaggaatggttatgatgaatttgcc
ttatttttccatgatacctatggtggtacagtaattggagttttattgagaccttctgca
ttagaaattaaggatctcaaggtttcaaatataagtggcagaaaatgtaataataataat
gaactagctttaaatatttctgcaatcatacaagatttttatgttcttggaaagggtctc
gtagaagcgatagatgttcgatctaaaaagttttctttaacttga
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