Bombus affinis (rusty patched bumble bee): 126919212
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Entry
126919212 CDS
T09368
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
baff03009
]
126919212
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126919212
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
90S particles
Helicases
126919212
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
HEM4
AAA_19
Motif
Other DBs
NCBI-GeneID:
126919212
NCBI-ProteinID:
XP_050584040
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All DBs
Position
1:complement(15742884..15747883)
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AA seq
582 aa
AA seq
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MDAYELFRKLSTGVKFDKKRFQVDAERFQLVNKQSENGDNDDKMNIKAFDNINHSTLCEK
RKYDEVEKETENINDLILLDGMSIPQNKNKKCKVALTEEKRLKLEKEKINQFRNHHHISV
TGNCIPKPISEFDELSTTYNISKKLIHNITNCGYKCPTPIQMQAIPVMLQGRNVLACAPT
GSGKTAAFLLPIIHYLGGPEKKGFRAVILSPTRELAKQTYRECLRLSEGYNFRVHIISKV
NQALNKYGLKSSQKFDILITTPKRIIYLLNQDPPAISFSNVEWLIVDEVDKLFEDGTRCF
RDQLETISKSCTNENLHKAMFSATNTPIVTKWCRRNLKGLITVTVGHRNAATDLVEQELL
FVGAERGKLVALRNIIQKGVLPPVLVFVQSKERAQELFNELIYDGVNVDVIHADRTQTQR
DNVVRCFREGKIWVLICTELMARGIDFKGVNLVINYDFPPSAISYVHRIGRTGRAGHKGK
AITFFTVQDTTNLRSIATIMRESGCNVPDYMLAMKKHSKRERRKHERKAPIRERISTVPT
FKRVETFKKRKVAINDSKKKNELESKENKDKKINTKHLKKEK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatatgaactatttcgaaaactttctactggtgtaaaatttgataaaaagcgt
tttcaagttgatgcagaaagatttcagcttgtcaacaaacaatctgaaaatggagataat
gatgataaaatgaacattaaagcctttgataatataaatcattcaacattatgtgagaaa
agaaaatatgatgaggtcgagaaagaaactgaaaacattaatgacttgatattacttgat
ggaatgtctattcctcaaaataaaaataagaagtgtaaagtagccttaactgaagaaaaa
cggttaaagttagaaaaagaaaagattaatcaatttcgtaatcatcatcacataagtgtc
acaggcaattgtatacctaaacctatctcagaatttgatgaactatcaacaacttacaat
atatctaaaaaattaatacataatattacaaattgtggttataaatgtccgactccaatt
caaatgcaggctatacctgtcatgctgcaaggtagaaatgtactagcttgtgccccaact
ggatctggaaaaacagctgcatttctgttacctataattcattatttaggtggaccagaa
aagaaaggatttagagctgttatattaagcccaacaagagaattagcaaaacaaacatat
agagaatgtttgcgtcttagcgaaggatataattttagagttcatattataagtaaagtg
aatcaagcattaaacaaatatggacttaaaagttcacagaaatttgatatattaatcact
acaccaaaaagaataatatacctgttgaatcaggatccaccagctatttcctttagcaat
gttgaatggttaattgtggatgaagtagataaactctttgaggatgggacaaggtgcttc
agagaccagctagaaacaatttcaaagtcatgtacaaatgaaaacttacataaagcaatg
tttagtgcaaccaatactcctatagtgaccaaatggtgtagacgtaatctgaaaggtctt
ataacagttactgttggacacagaaatgctgcaacagacttagtagaacaagaattgtta
tttgttggggcagagagaggaaaacttgtggcacttagaaatattattcaaaagggagta
ttaccacctgtactagtatttgtgcaaagcaaggaaagagcacaagaattatttaacgaa
cttatatatgatggagtcaatgttgatgttattcacgctgatagaacacaaacgcagcga
gacaatgtcgttcgttgttttagagaaggaaaaatatgggtactaatatgtacagaatta
atggcaagaggtattgatttcaaaggtgtaaatcttgttattaattacgattttccacca
tctgctatttcttatgttcatagaattggtcgcactggtagagctggacataaaggaaaa
gcaattactttttttactgtacaagatactacaaatttgaggagtatagctactatcatg
cgtgaatctggttgtaatgttcctgattatatgttagccatgaaaaaacatagtaaaagg
gaaagacggaaacatgaacgcaaggctcctattagagaaaggatatcaactgtacctaca
ttcaaacgcgtagaaacatttaaaaaaagaaaagttgctataaacgattccaaaaagaaa
aatgaattagaaagtaaagagaataaagataaaaaaataaatacaaaacatttaaaaaaa
gagaaatag
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