Bombus affinis (rusty patched bumble bee): 126919230
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Entry
126919230 CDS
T09368
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03008
Ribosome biogenesis in eukaryotes
baff03013
Nucleocytoplasmic transport
baff03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126919230
03015 mRNA surveillance pathway
126919230
03008 Ribosome biogenesis in eukaryotes
126919230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126919230
03009 Ribosome biogenesis [BR:
baff03009
]
126919230
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126919230
mRNA cycle factors
Stress granule specific factors
126919230
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
126919230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
RRM_NXF1-2
NTF2
LRR_4
LRR_8
LRR_NXF2
Methyltransf_10
Motif
Other DBs
NCBI-GeneID:
126919230
NCBI-ProteinID:
XP_050584094
LinkDB
All DBs
Position
8:12495625..12501371
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AA seq
650 aa
AA seq
DB search
MPKKSSKPQRGGRGGRLGNFEDKHYFGHDDRVLRNDRGSYLGNRPRVSFKTQVRPTRDVP
RSLTLACLDEDVQMATSSNNNNNNSRQVIITGRNRRMQRGRNSPVPHRRYRTSLAPRSKR
FPIGEINWYKVTIPYGHKYDKDYIINNLLSYIAPETFLPIMYRVFGSEANFYVDDEKIAV
ALLDCDRKITTTDGYKLLVRVSKSPFPQCEIDAKLKERLKQAMAKRYMHATNALDLSRFH
RDPDLISDYFCALFQSPILKAVLDIVSEYIPDLEALNLDGNKLQTIQNLNILNRKFLKLK
ILYIGDNRIKDINQLDIIKDLKLEELKLAGNPICNKYKSRQNDYISDVRKRFPKLLRLDG
MDLPKPILFDVVDEGNKIPLSQRMFVANAKAQEVASQFLQQYFLIFDSENRQPLLDAYVE
HACFSMTVSYPPHYTNKLNGYLMENRNLMENKNLMDNRNLYRTNDTNRKQKLLKHGRLPV
VSFISEMPRTSHYLNTFTMDISLITDGIMLITVTGLFKELDKKEQPVRYFNRTFIIVPEG
NGYCIRNEQLHISQPTDAQLKQLSSQPQTQMIQDPGSQTPSISGNEKSLTVQLSEDVKQQ
MTMTLSQQTNMNLEWSLKCLEEVSWNYDNALSAFQEFYKRGQVPAEAFNK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaatcaagtaaaccgcaaaggggtggccgaggtggaagacttggaaatttt
gaggataaacattattttgggcacgatgaccgtgtactcagaaatgacagaggttcatat
cttggtaataggcctagagtatcattcaaaacacaagtaagaccaacaagggatgtgcct
agaagtctgacattagcatgcttagatgaagatgtacaaatggcaacaagttccaataat
aataataataatagtaggcaagttattataacaggaagaaatagaaggatgcaacgtgga
agaaatagccctgtgcctcatagaagatataggactagtttagctcctagatctaagcga
tttcctataggagaaattaattggtataaagttactataccatatggacataaatatgat
aaagattatataataaataatcttcttagttatatagcaccggaaacttttcttccaata
atgtatcgggtttttggaagtgaagccaatttttatgtagatgatgagaaaatagcagtt
gcgttacttgactgtgatcgtaaaattacaactactgatggatacaaattattagtaaga
gtctcaaaatcaccgtttcctcaatgtgaaattgatgccaaactgaaagaaagattgaaa
caagccatggctaaacgatatatgcatgctacaaatgcactagacttgtcaaggtttcac
agagatccagatcttatttccgactacttttgtgcactattccaatctccaatattaaaa
gcagtattagacattgtatcagaatacataccagatttagaggcattaaatttggatgga
aataagttacagacaatccaaaatttaaatattctgaatagaaaatttttaaagttaaag
atactgtatattggagataacaggataaaagatattaatcaattggatattatcaaagat
ctgaaattggaagagcttaaattggcagggaaccctatatgcaacaaatataaatctcgg
caaaatgactacattagcgacgtgcggaaaaggtttcctaaactcctgcgactggatggt
atggatctcccaaagccaatcttattcgatgtagtggacgaaggaaacaaaatacccctt
tctcagaggatgtttgttgcaaatgcaaaagcacaagaagttgctagtcaatttctacag
cagtactttctcatatttgatagtgagaatcgccaaccattgctagatgcgtatgtcgaa
catgcgtgttttagcatgaccgtgtcttatcctcctcactatactaataaattaaatggc
tacctaatggaaaatagaaatctaatggaaaataagaatctaatggacaatagaaacctc
tacagaacaaacgatacaaacagaaagcagaagttattaaaacatggtcgtttgcctgta
gtttcatttatttccgaaatgccacgaacttcccactatttgaatactttcacaatggac
atcagcctgattacagacggaataatgttgattacagttactggactgttcaaagagctt
gacaagaaggaacagcctgttcgttactttaatcgaacctttataatagtaccagaagga
aatggttactgtattcgaaatgaacaactacatatcagtcaaccgacagacgcacaatta
aaacaattgagtagtcaaccacaaacgcaaatgatccaggatccaggatcacagactcct
tcgattagcggcaacgaaaaatcattaacggttcaattatccgaagacgtaaaacaacaa
atgacgatgacgcttagccaacaaacaaacatgaacttagaatggagtttaaagtgttta
gaagaagtatcatggaattatgacaatgcgctttctgcgtttcaagaattttacaagcgg
ggacaagtaccagcggaagcatttaataaataa
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