Bombus affinis (rusty patched bumble bee): 126919373
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Entry
126919373 CDS
T09368
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126919373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126919373
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126919373
mRNA degradation factors
5'-3' decay
Decapping complex
126919373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
ELFV_dehydrog_N
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
126919373
NCBI-ProteinID:
XP_050584451
LinkDB
All DBs
Position
8:complement(1319197..1324494)
Genome browser
AA seq
1079 aa
AA seq
DB search
MKMIKTGEDNLNLQYQQTVEFTGQENQHSVELYSSNVVVIPSPGGHNHGSSKVKLKNIVD
FTWEHNFYPGQLLAVHMSGKYLAYGIKVGNGGGVVRVVYKELEQRALLRGMRAAIQDLAF
AHVSNAILACVDYLGNLFIHTIESTPSELLCSLLLQVDAEDISPTSHRVIWCPYIPEDVP
SDGDKVSKLLVLTRGSRVELWSVNTVSARFRSIEAIDPAVKENGGMLEIDQHSDTIIEAT
FSPDGTALATASFDGEVKFFQVYLHSNPHGNQVQPRCLHQWRPHGGRPISCLFFLDDHKT
YHPEVQFWRFAITGCDNNTELKVWSCEVWSCLQTIKFAPTPSTGKLPVLKAGLDLSAGYL
LLSDIYNKVLYILSLTKDNDEITSVNTISEFLLPYPILSFGIVDAGLRKMRPTGESLEDL
CPCEEDTEEQLVIRMYLVQPKSLQECHIAFKPASQVSGNCLMDTLTHKSLGYSEDTRDMG
NVNHNGISVENCEENRSLSATLETTTNHNAGLNLMTPDAFSSPAKKENNELDSRPSSPEL
GKVLSASPSLAQAVQALNATDPPLATNELEEQAPASSGSSPSREVREILSLTKADEEPEP
ENKPKDTNTADEDWPNIPMVLLKDVSRHAMQEADGFTNDEEKRKRLKDESKPTTHTTGNT
ENTWQTTNELNTLELINKVESILEIIQDQRQELRELSTEVTRLRQETPISTRVESALARA
SQQLNATLEQTLYSQMARQHDFLKTLETTMKDKIETTLPRIIEDTVEPLKHQLRLDSARM
DELLKKNLTELINSNHIKDTLAMAAVNAAKPALDAAFKETFTNVLLPGMEKACQTMFKQV
QDAFVRGTREYLQNVDAIADKQYQQRNEQQSEALSALVREELQTELNRGLIILQEGTIRT
IRDSIRDNLNQQLTEITNARSRATTPAIPVSAVADAQARVISLLQRGQLNAAFQQALSAS
DLGLVVLVCEKTEPSRVFSSVGPQGQTSRCILQQPVILSLVQQLSADLGHRTELKHRWLE
EAILNLDPNDPVTREHMGTVLMTLQSQLAAFVAANPSHNSIRRMKMLAMAARALFNQQP
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatcaaaacgggagaggataacctaaatcttcaatatcagcaaacagtagaa
ttcactggacaagaaaatcaacattctgttgaattatatagtagcaatgttgttgttatt
ccttcaccaggaggtcataatcacggtagttcaaaggtgaagttaaaaaatattgttgat
tttacatgggaacataacttttacccaggccaattattagctgttcatatgtctgggaaa
tatttagcttatggcataaaagttggtaatggaggaggtgtggttagagttgtatacaaa
gaattggaacaaagagctctattaagaggaatgcgtgcagcaatacaagatctggctttt
gcacatgtttctaatgcgattttggcatgtgttgattatttgggaaatctttttatacat
accattgaatcaacaccatcagaattgttatgtagtttattgctacaagtagatgcagaa
gatatatctcctactagtcatcgtgtgatatggtgtccatatattcctgaagatgtacca
tcagatggagataaagtttcaaagcttttagttctaactcgtggttccagagtagagttg
tggtcagttaatactgtttcggcaagattcagatcaatagaggcaattgatccagctgtg
aaggaaaatggaggcatgttggaaattgatcaacattctgatacgatcatagaagcaaca
ttcagtccagatggcacagccctagctacagctagttttgatggtgaagtcaaattcttt
caagtttacttacatagtaatcctcatggtaatcaagtacaacctcgttgtttacatcaa
tggagaccacatggtggacgaccgatttcttgcttgttcttcctagatgaccataaaaca
taccatccagaagttcagttttggaggtttgccataactggatgtgacaataatacagaa
ttaaaagtttggtcttgtgaggtatggtcctgtttacaaaccattaaatttgcacctaca
ccttctaccggtaaattaccggtgttaaaagctggcttagatcttagtgcaggatacctt
ttattatcagatatatacaataaagttctgtacatattaagtcttacaaaagataatgat
gaaataacatcagtaaatacaatatcagagttcctccttccatatccaatattgagtttt
ggaattgttgatgctggtttacgtaaaatgcgtcctactggagaatcgctggaagattta
tgtccttgtgaagaagatactgaagagcaacttgttataagaatgtatctagttcaacca
aagtcattacaagaatgtcatattgcttttaagcctgcctcacaagtgagtggtaactgc
cttatggacacactaactcataaatcactgggctactctgaagacacacgagatatggga
aatgttaatcataatggaatttcagtggaaaattgcgaagaaaatcgttccttatctgct
acacttgagacaacaacaaatcacaatgctggcttaaatttaatgacaccagatgcattt
agctcgcctgccaaaaaagaaaataatgaattagattctcgccctagtagcccagaatta
ggtaaagtgttatctgctagtccctcacttgcacaagcagttcaggctctaaatgcaaca
gacccaccattagccacaaatgagttagaagaacaagcacctgctagtagtggtagtagt
ccatcgagagaagtaagagaaattttatctcttacaaaagcagatgaagaaccagaaccc
gaaaataaaccaaaagatactaatactgccgatgaagattggcctaatatcccgatggta
ttattaaaagatgtaagcagacatgccatgcaggaagccgatggattcacaaatgacgaa
gaaaaaagaaaaagattaaaagacgaatcgaaaccaacaacgcatactacaggaaatact
gaaaatacatggcaaacaacaaacgaattgaatactctcgaactaataaataaagtagag
tcaattttggaaataattcaagatcaacgacaggaattaagagagttaagtactgaagtg
actagattaaggcaagagacaccaatctcgacgcgagtagaatctgctttagcacgagct
tcacagcaactaaatgcaaccttagaacaaacattatacagccaaatggctcggcaacac
gattttcttaagacacttgaaacaacaatgaaagacaaaattgaaactaccttaccacgt
attattgaagacacagtagaaccattaaagcatcaacttagattagattctgctcgaatg
gatgaactcttaaaaaagaatttgacagaactcattaatagtaatcatataaaagataca
cttgctatggcagcagtgaatgcagcaaaaccagcattagacgcagcatttaaagagacg
tttacaaatgttcttttacctggcatggaaaaagcatgtcaaacaatgttcaaacaagta
caagatgcttttgttaggggtactcgtgaatatcttcaaaatgtggatgcaattgcagat
aaacaatatcagcaaagaaatgaacaacaaagtgaagcactatccgcattagttcgcgaa
gagttacaaacagaattaaatagaggtttaattattcttcaagaaggaacaatacgtaca
attcgtgattctattagagataatttaaaccaacaacttactgagatcacaaatgcgcgt
tctcgagctactacacctgctataccagtatcagcggttgctgatgctcaagcgcgagtt
atatctctcctccaacgaggacagttaaatgctgccttccaacaagctctaagtgctagt
gatttaggcttggtagtactagtttgtgaaaaaacagaaccttctagagtattttcttct
gtaggacctcaaggtcaaacctcaagatgtattttacaacaacctgtaattctttcactt
gtacaacagttatccgcagacttaggacaccgtacagaactgaagcataggtggcttgaa
gaggcgatattaaatttagatcctaatgatccagtaacacgagaacatatgggtactgtg
ttaatgactttgcaatctcagttagctgcttttgtagcagctaatccgagtcataattct
atacggcgtatgaaaatgttagctatggctgcccgtgcactttttaatcaacaaccttga
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