Bombus affinis (rusty patched bumble bee): 126919858
Help
Entry
126919858 CDS
T09368
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
126919858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
baff02000
]
126919858
Transporters [BR:
baff02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
126919858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
126919858
NCBI-ProteinID:
XP_050585456
LinkDB
All DBs
Position
8:6896267..6907219
Genome browser
AA seq
611 aa
AA seq
DB search
MTEASREPELADPENPDKTALNLASASNKTKPLPERGTWSTKLDFILSVVGLAIGLGNVW
RFPYLCYKNGGGAFLIPYFLTLVLAGIPMFFMELALGQMLTVGGLGVFKIAPLFKGIGYA
AAVMSCWMNVYYIVILAWAIFYFFMSMRSELPWGSCNNYWNTKNCVNPYDRDSLICWNQV
TRHHNYVKVCSVNDVNMTITELTDPVKEFWERRALQISEGVEHVGNIRWELAGTLLLVWI
LCYFCIWKGVKWTGKVVYFTSLFPYVLLTILLIRGITLPGAMEGIRFYISPNLSKLKESE
VWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCSVNSSTSMFAGFVIFSVVG
FMAHEQQKPVAEVAASGPGLAFLAYPSAVLQLPGAPLWSCLFFFMLLLIGLDSQFCTMEG
FITAMVDEWPQLLRRRKELFIAIVCVLSYIIGLSCISQGGMYVFQILDSYAVSGFCLLFL
IFFECISISWAFGVNRFYDAIRDMIGYYPLMWWKLCWTITTPMICVGVFIFNLVQWTPVK
YLDYEYPWWSHVLGWMTALSSMLCIPGYMIYAWKTTPGDTSTKYKLLVRIEDDVTGLRMK
MGQPSVELTPL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagcatcgagagaaccggaactcgcggatcctgaaaatcctgacaaaaccgca
ttgaacttagcatctgcatctaataaaacgaaaccactgccagaacgtggtacatggagt
accaagctagatttcattttaagcgtggttggtctagcaatcggtctgggaaatgtctgg
agatttccatatctctgttacaagaatggtggcggtgcatttttaattccgtatttttta
acactggttcttgctgggattccaatgttctttatggaattagctctcggccagatgctt
accgttggtggcctcggtgtcttcaaaatagcgccattgtttaagggtatcggatatgcc
gccgctgtcatgtcttgttggatgaatgtttattacatcgtcattcttgcttgggctatc
ttctatttttttatgtccatgcgcagtgaattaccatggggaagctgtaataactactgg
aacacgaagaattgcgtaaatccctacgacagagattcgctaatatgttggaatcaagtt
actagacatcataattacgttaaagtatgttccgtcaacgatgtcaacatgacaatcaca
gagcttactgatccggtcaaagaattttgggaacgtcgagcacttcagatcagtgagggc
gtggaacatgtcgggaatattcgttgggaactagctggtaccctccttttggtttggatt
ctctgttatttttgtatttggaaaggtgtgaaatggactggaaaggtggtatactttacc
tccttgttcccttatgttttgttgacgatccttctgattcgtggcattactttacccgga
gccatggaaggcattcgattttatatcagtccaaatctttccaaattaaaagaatccgag
gtatggatagatgctgttactcaaattttcttttcatatggactaggtttgggtacatta
gtggctcttggtagttacaataaatttacaaataacgtttacaaagacgcattgatcgtt
tgctcggtgaattcttcgacgagcatgttcgctggtttcgtcatattttccgtggtaggc
ttcatggcccacgaacaacaaaaacctgtcgcagaagtcgctgcttctggtccaggattg
gctttcttagcttacccttctgcggttcttcaacttcctggagcgcccctttggtcttgt
ctcttcttctttatgcttcttctcataggtttagattctcagttttgtactatggaaggg
tttattactgccatggtggacgaatggccgcagttgcttcgccggcgtaaggaactattc
attgcgatagtttgtgtgctttcttacattattggattatcttgtatttcgcaaggtggc
atgtatgtctttcaaatcttggattcatacgcagtatctgggttctgtcttctcttccta
atttttttcgagtgtatctcgataagttgggcttttggtgtaaatcggttttacgacgct
ataagagacatgataggatattaccctctaatgtggtggaagctatgttggactattacc
acccccatgatttgtgtcggcgtcttcattttcaatctcgtacaatggacacctgtaaaa
tatttagactatgaatatccatggtggtcgcatgtgcttggctggatgacggctttatct
tcgatgctttgtatacctggttacatgatttatgcctggaagacgacaccaggagatacg
tctacaaaatacaagttgttagtacggatagaggatgatgtaacaggtctacgaatgaaa
atgggccagccatcggtcgaactgacaccactttaa
DBGET
integrated database retrieval system
