Bombus affinis (rusty patched bumble bee): 126919944
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Entry
126919944 CDS
T09368
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03082
ATP-dependent chromatin remodeling
baff03083
Polycomb repressive complex
baff04213
Longevity regulating pathway - multiple species
baff04330
Notch signaling pathway
baff04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126919944
03083 Polycomb repressive complex
126919944
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
126919944
04350 TGF-beta signaling pathway
126919944
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
126919944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
baff03036
]
126919944
Enzymes [BR:
baff01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
126919944
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
126919944
HDAC complexes
Sin3A-HDAC complex
126919944
BRAF-HDAC complex
126919944
REST complex
126919944
SHIP complex
126919944
MiDAC complex
126919944
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
126919944
Heterochromatin formation proteins
Other heterochromatin formation proteins
126919944
Chromatin remodeling factors
NuRD complex
126919944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
126919944
NCBI-ProteinID:
XP_050585664
LinkDB
All DBs
Position
9:complement(991823..996745)
Genome browser
AA seq
492 aa
AA seq
DB search
MTTLPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQPIPEDGAVIEDSEAEEKVNPDERLPQRDLDKRIQHENE
YSDSEDEGEGGRRDNRSFKGSRKRPRLEKGQEGIESDLKKEEDIKSEPKENEKDEKTNVT
NEETKKDGGSNP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgttaccacatagcaagaagcgtgtctgctactattatgatagtgatattgga
aattattattatgggcaaggacatcctatgaagccacatcgtataaggatgacacataat
ttacttttgaattatggtctttataggaagatggaaatatatcgtccacataaagctaca
gcagatgaaatgacaaaattccatagcgatgactatattaggtttttgagatccataaga
cctgataacatgtcagagtataacaaacaaatgcaacgatttaatgtaggagaagattgc
cctgtctttgatggtttatatgaattttgtcaattatcagctggaggttctgttgctgcc
gctgtgaagcttaacaaacaggcctcagaaatttgcataaattggggtggtggcttgcat
catgccaaaaaaagtgaagcatctggattttgttacgtaaatgacattgtattaggaata
ctagaattactgaaatatcatcagagagtgttatatattgatattgatgttcatcatgga
gatggtgtagaagaagctttttataccacagatagagttatgacggtttcttttcataaa
tatggtgaatattttcctggtactggtgatctgcgtgatattggtgctggaaagggaaag
tattatgcagtcaatataccactaagagatggtatggatgacgaaagctatgaatcaata
tttgtacctattatttctaaagtgatggaaactttccaaccttctgctgtggtcctacaa
tgtggtgctgattcattaactggagatcggttaggctgtttcaatttaacagtgaggggt
catgggaaatgtgttgaatttgtaaaaaaatataatctacccttcttaatggtcggtggt
ggtggatatacaatcagaaatgtgtctagatgctggacatacgaaacttcggttgctctt
ggttctgaaattgcaaatgagttaccctataatgattattttgaatattttggtcccgat
tttaagctgcatattagtccttcaaatatggcaaatcaaaatactcctgaatatcttgag
aaaattaaaaccagactatttgaaaatttaagaatgttgccgcatgccccaggtgtgcag
gttcaaccaattccagaagatggtgcagtcattgaagattcagaggctgaggaaaaggta
aatccagacgaaagattaccacaacgagatttagataaaagaatacaacacgaaaatgaa
tatagcgacagtgaggatgaaggtgaagggggacgaagagataataggtcatttaagggt
tccagaaaacggccacgtctagaaaaaggacaagaaggtatagaaagtgatctaaaaaaa
gaagaggacataaaatcggaaccaaaagaaaatgaaaaagatgaaaaaacgaatgttaca
aatgaggaaacgaagaaagacggtggatcgaatccctga
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