Bombus affinis (rusty patched bumble bee): 126920142
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Entry
126920142 CDS
T09368
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
baff01009
]
126920142
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126920142
04131 Membrane trafficking [BR:
baff04131
]
126920142
03036 Chromosome and associated proteins [BR:
baff03036
]
126920142
Enzymes [BR:
baff01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
126920142
Protein phosphatases and associated proteins [BR:
baff01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126920142
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126920142
Membrane trafficking [BR:
baff04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
126920142
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
126920142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
DUF604
Motif
Other DBs
NCBI-GeneID:
126920142
NCBI-ProteinID:
XP_050586078
LinkDB
All DBs
Position
9:412211..418491
Genome browser
AA seq
1160 aa
AA seq
DB search
MSDSVICKNLHSAVKQLADSEIELIKAIENSEKINNRNIKNTMSMTDKKSAKKSAKMFNV
RPSAALIAAKHEATQRVLQGKKSNNVFVHDIYQKAIDAYNITRKETGIVFDRSMAEHKCL
WDPSYPECPARLTRVIQRCEELGLINRCKLVTPRQASEDEILMKHSQEQIDILKATDECT
DVDSLELLSSTYDAIYIHPSTYQLSLLAVGSTINLVESICKEEIQNGMAIIRPPGHHAMK
SEYCGYCFFNNVAIAAEKVLSSNLASKILIVDWDIHHGQATQQMFYNDPRVIYFSIHRYE
NGEFWPNLRESNFHFVGDGLGEGYNFNVPLNKTGMTNADYLAIFQQVLLPMAYEFQPDLI
IVSAGYDAALGCPEGEMLLTPACYAHLLSSLLSLAAGKVAVILEGGYCLKSLAESAALTL
RTLLGDPCPMLETLTLPSISVRDTILNTIYAHKPYWKCYQYQDTYSINSTTNNKEGSTNQ
YLPVVTFKGTDIKPEVYETRNCYPTQNKEVIEMIEKQLNTLIQFTNLSKAPNKVCIVYDD
RMLKHCDMFNDNHPEKPHRINIIYKKYQEYNLLDRCYVQQGRSATREELILVHSKEYIDS
IKDTENLKPKELKKQAETYNSVYLHPETWTSACISTGSLLQVVDSVLNGESQSGIAIVRP
PGHHAGENIACGFCIFNNIAIAAKYAVEFHHVKRVLIVDWDVHHGNGTQSVFEEDPKVLY
MSVHRYDNGNFFPNSKRANYSYVGSLSGEGFTVNIPWNKKGMGDAEYIAAFQQIIMPIAY
QFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWLSSLANGRIILSLEGGYNINSIA
HAMAICTKSLLGDPLPILENGQTPCASAIHTINNVIKTQKQYWTHLVFNLSLPKERVLPK
PKVPHIKTNERVINSEKILKHSESKIALEEIETEKMQTRQKNLTTWKLINKMASQEDCEK
LQEFLKSVHERRTHTTINTSYNDEGSKYTKKCMNQDEEEGHSDENITNFAAGSSGEQGER
ASAQMTGNKSLHDYLLENSQALVDGDMFAVIPLRECPHLDSVKDVPVSGIDIYSPCIECE
SNVENWICLQCYTVHCARSINQHGLIHAEEMEHPLALSFSDLSVWCYKCEAYIDNLRLFA
ARNAAHQSKFNEELPWTYEI
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactctgtgatctgcaaaaatttacactctgctgttaaacaattagcagacagt
gaaatcgagttaataaaagctatagaaaattcagaaaagataaataacagaaatattaaa
aatactatgtctatgacagataagaaaagtgccaaaaagtctgcaaaaatgtttaatgtt
cgtccatctgctgctttaatagcagctaaacatgaagcaacacaacgtgtattacaagga
aagaaatctaacaatgtttttgtacatgatatatatcaaaaagctattgatgcatataat
ataacaaggaaggaaactggcattgtgtttgatcgttctatggcagaacataaatgtctt
tgggatccaagttatccagaatgtcctgctagattgacaagagttatacagagatgtgag
gagttaggtttaataaatagatgtaaattggttacaccaagacaagcctcagaggatgaa
atactaatgaagcacagccaagaacagatagatattttgaaggctactgatgaatgtaca
gatgtagatagtttagaattattatcatcaacatatgatgccatttatatacatccttct
acctatcaattgtctttgttagctgtgggttcaacaataaatttagtggaaagcatttgc
aaagaagaaattcagaatggtatggctattataaggccaccaggacatcatgcaatgaaa
tcagaatattgtggatattgtttcttcaataatgttgcaattgctgctgaaaaagtttta
agtagcaatttagctagtaaaattttgattgttgattgggatatacaccatggacaagct
actcagcaaatgttctataatgatccacgagtaatttatttttcaattcaccgttatgaa
aatggtgaattttggccaaatcttagagaatctaatttccattttgttggagatggttta
ggagaaggatataattttaatgtgccacttaataaaactggcatgaccaatgctgattat
ttagccatatttcaacaagttttattgccaatggcctatgagtttcaacctgatctcata
atagtatcagctggatatgatgcagccttgggctgtcctgagggtgaaatgttgctaaca
cctgcgtgttatgctcatttactatcatcattattgagtttagccgctgggaaagttgct
gttatattggagggtggttattgtttaaaatcattagcagaaagtgcagcattaacacta
cgtactttgttaggtgatccatgtcctatgttagaaactcttacattaccttcaataagt
gtacgtgataccattttaaatacaatttatgcacataaaccatattggaaatgctatcaa
taccaagatacatacagtattaatagtacaacaaataataaagaaggaagtactaatcaa
tatttacctgtagttacattcaaaggaactgatattaagcctgaagtgtacgagactcga
aattgttatccaactcaaaataaagaagttatcgaaatgatagaaaagcagttaaataca
ttaatacagtttactaacttatctaaagcacctaacaaagtgtgcattgtttatgatgat
agaatgttaaaacattgtgatatgtttaatgataatcatccagaaaaaccacatcgtatt
aatattatttataaaaaatatcaagagtacaatttacttgatcggtgttatgtgcaacag
ggacgaagtgcaacaagagaagaattaatattagttcattcaaaagaatatatagattca
ataaaagacacagaaaacttaaaaccaaaagagctaaaaaagcaggcagaaacatataat
tcagtttatttgcatcctgaaacgtggacaagtgcttgtatatcaactggatcattatta
caagtagttgatagcgtattaaatggagaaagtcaatccggtattgctattgttaggcct
ccagggcatcatgctggagagaatatagcatgtggtttttgtatttttaacaatattgct
atagcagctaaatatgcggtagaattccatcatgtaaaaagagtattgatagtagattgg
gatgtacatcatggtaatggaactcaatccgtctttgaggaagaccctaaagttttgtat
atgtctgtccatcgttatgataatggcaatttttttccaaattctaaacgagcaaattac
tcttatgtcggttctctatcaggagaaggtttcactgttaacattccatggaataagaaa
ggaatgggcgatgcagaatatatagcagcatttcaacagataataatgccaattgcttat
cagtttaatccagaattagtcttagtttctgcgggttttgatgcatgtattggggatcct
ctaggaggttgtttcgtaacaccagaaatgtacggacacttaacacattggctatcttct
ttagctaatggtcgtattattcttagtcttgaaggaggttacaatattaattcaatcgcg
catgcaatggctatttgcacaaaatctttacttggtgatcctttaccgatattagagaat
ggacaaactccatgcgcgagcgctattcacactataaataatgttataaaaacacaaaaa
caatattggacacatttagtatttaatttatctttaccgaaagagagagtacttcctaag
cccaaagttccacatataaagacaaatgaacgtgtcataaacagtgaaaaaatattaaag
cattcagaatctaagatagcattggaagaaatagaaacagaaaaaatgcaaactaggcag
aaaaaccttacaacttggaagctgataaataaaatggcctcacaagaagattgtgagaaa
ttacaagagtttcttaaatctgtacatgagcgacgtacacatacaacaattaatacttct
tataatgacgaaggttccaagtatacaaagaagtgcatgaatcaggacgaagaagaagga
cattctgatgaaaatattaccaattttgctgctggtagtagtggtgaacaaggtgaaaga
gcaagtgcgcaaatgactggaaataaaagtttacatgattatttgttggaaaattcgcaa
gcattagtggatggcgacatgtttgcagtgatacctttacgagaatgcccacatttggat
agtgtcaaggatgtaccagtttctggaattgatatatattcaccatgtatagaatgtgaa
agcaatgttgaaaactggatctgtttacagtgttatactgttcattgtgctcgtagtatt
aatcaacatggtttaatacacgctgaagaaatggaacatccattggccctaagtttcagt
gatttatcagtttggtgttacaaatgtgaggcatacatagataatctgcgattatttgcc
gcgcgcaatgctgcacatcaaagtaaatttaatgaggaattaccatggacgtatgaaata
taa
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