Bombus affinis (rusty patched bumble bee): 126920297
Help
Entry
126920297 CDS
T09368
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126920297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126920297
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126920297
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126920297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
V-SNARE
Motif
Other DBs
NCBI-GeneID:
126920297
NCBI-ProteinID:
XP_050586373
LinkDB
All DBs
Position
9:14639826..14645179
Genome browser
AA seq
684 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKTWLASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVSNWLANSIDALNLQLDTFESEIESLLAGKKKRLDKDKQDRMDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQEPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNSQASIPTTGNTATIKSNLLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHTNSQAIHSTSSKTSSHSSENGLLSSSSASSVTSNVPQTTSQQHSNPVPIQTTHVL
HNQQNQNHSSETEMTTPIPPSSSPQSSVSSRSSPLPANSCSPAPSTANGLIPKLPDGMSS
LKSIAQQVIVRAGLDIPPSESNRNIFDTAKANNNNSKVTMEAHIPPLLSVAPLGPVPLQK
EHQLQFQLMEAAHYHMPHPSDSERLRSYLPRNSCVTPSYYQQSQLPHSDTVEFFQRLSTE
TLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDY
EKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacggag
ggggtagagacatttgaagatatttggcaaaaggttcataatgctacaaacagcaatcag
aaggagaaatatgaagcagatctcaagaaagaaatcaaaaaacttcaaaggttacgtgat
cagattaaaacctggcttgcatcaggcgaaattaaggataaaagtacgcttcttgaatat
agaaagttaattgaaactcaaatggaaaggtttaaagttgtggagagagagacaaaaaca
aaagcttattcgaaagaaggattaggagctgctcaaaaacttgatccagctcaaaaagaa
cgagaagaagttagcaattggcttgcaaattctatagacgctttaaatcttcagctggat
acatttgaatccgagatagaatcattactcgcaggaaagaaaaaaaggttagataaagat
aagcaggataggatggatgaattaaaagcaaaacttgataaacatcgttaccatatccgt
aaattggaaacattgttacgcatgttggacaatatgtctgttgaagttaacactattaag
aggataaaagatgatgtagagtattatatcgaatcctcgcaggaacctgattttgaggaa
aatgaatatatctacgatgatattatcggtctcgatgaagttgagctgtctggagttggt
attccctcatcagcaactacagatagtaataatagcaacgaaactggaggtacaccaacc
tcaactaactctggtacttcacccataccatcacctccattgagttctaccatgcataac
cattcgagtgatagttctacagataatgacaaaaaaacgaagcctgtgaaaccaacagca
gtcaggccattattaaattcacaggcgagcattccaaccacgggaaacactgccaccata
aaatcgaatttattatcaagcagcactccaagcaagaccattcccatgacacctagccat
agctcgcctagttctacaagtaatcacattgctacaactaatgctggtaattttgctaca
gtagctgcatcacatactaattcacaagccatccattctacctctagtaaaacatcttct
catagcagtgaaaatggtttattgtcatcatcgtctgcgtctagtgttacctcgaatgtg
ccacaaacaacctcgcagcagcatagtaatccagtgcccatacagacgacacatgtgttg
cataatcaacaaaatcagaatcatagcagcgaaactgaaatgacaacgccgatcccacca
tcttcttcgccacagtcgtcagtcagcagtagatcttcacctttgcccgcaaattcctgc
tcgccagcgccatccactgccaatggtctcatccctaagcttcctgatggcatgtcctct
ttgaaatctatagcccaacaagtaattgtccgagcaggtttggacataccgccgtccgag
tcgaacagaaacatctttgacactgctaaggcgaacaataataacagcaaagtcaccatg
gaagcacacattcctcctcttcttagcgttgcgcctctcgggccagtacctcttcagaaa
gaacaccagttgcagttccagttgatggaggccgcccactaccatatgcctcatccatct
gattctgaacgtttacgatcatatttaccaagaaattcgtgtgttacaccttcttattat
caacagagtcaacttccccattctgatactgtggagttcttccaacgtctttccacggaa
acgttgttcttcatattttattacatggaaggttctaaaggccagtacctggctgcaaaa
gctctaaagaaacaaagttggaggtttcatacaaagtatatgatgtggtttcagaggcac
gaagaacccaaagtgatcaacgaggaatatgagcagggaacctacatatatttcgattat
gaaaagtggggacaaagaaaaaaggaaggttttacatttgagtacaagtacttagaggac
agagatctgaattaa
DBGET
integrated database retrieval system
