Bombus affinis (rusty patched bumble bee): 126920330
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Entry
126920330 CDS
T09368
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126920330
09122 Translation
03013 Nucleocytoplasmic transport
126920330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126920330
03041 Spliceosome [BR:
baff03041
]
126920330
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126920330
Spliceosome [BR:
baff03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126920330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
ATAD4
Motif
Other DBs
NCBI-GeneID:
126920330
NCBI-ProteinID:
XP_050586474
LinkDB
All DBs
Position
9
Genome browser
AA seq
666 aa
AA seq
DB search
MGKENDSDNTKKRRKSVSGNSGISLKDGDIYKVIISYEEKEAIERLPENDSESFLSTCDN
IRAAMNKIAKLKTTGDVNAKDEIHELQIQTSLAFIELKKLNRMEKFRTKFARDSLISSKS
SVDSRHLHLQNLLYEVMHLKKEVVKCLQFKSKDELIQLVSEEEFYKEAPENISRLEITKH
NPHQLRLARLEWELTQRKQLAALCDELTENKKAVALSIESKQTRLDNLAPQLRTILEASK
PLQESLGLLLDKVRQEHHKATLLASPLYVLYAKASAYRDAYDNSIIVKVEGDEEEAKRAN
NQDGLQESDSDAETVSENVTEETPVHKKRHHRLSREARQEEKRTKLLQRHPLNVKIIIKL
KNETKLTLQFYYMMSLKVVTVESKLKTDGIMGISTGDMLISESILRELYPRDLGLESPNP
ANYYQLNRHNLGQFSSLGLGIPYKWAQRMAGLHFISLDTREQKFTSCEITQDSVECVLRE
IKRRVIARLELCTEIRQLECGNFPNFTANNDILPQKLSTILQKFSTISWSNYCNSVNPIF
QEQGLVSSLDIFYEAILRRGNNELIARIAIKPDYPKIAPVFNISINPIVPASVDILRDIE
REVNVMWIKPPTLSAQLQRLRACFDIYLESETIIPKEKIFFHPVKGRIRARPYKYLELGG
GIFIHR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagaaaatgattctgataatacaaaaaaaaggagaaaatcagttagtggaaat
tctggaatatctctgaaagacggagatatatataaggttataattagttatgaagaaaag
gaagctatagaacgtttaccagaaaatgactctgaaagttttctctctacctgtgataat
atccgtgcggctatgaataaaattgcaaaattaaaaaccactggggatgtaaacgctaaa
gatgaaatacatgaacttcagattcaaacatcattagcatttattgaactaaaaaaattg
aatagaatggaaaaattccgtacaaaatttgcaagagattctcttatatcttcaaaaagt
tctgtcgatagcagacatttacatttacaaaacctgttatatgaagtaatgcatttaaag
aaagaagttgttaaatgtcttcaattcaagtctaaagatgaattgatacaacttgtatca
gaagaagaattttacaaggaagcacctgaaaatatttccaggctggaaataacaaaacat
aatcctcatcaactaagactagcacgcctagaatgggaattaacgcaaagaaaacaacta
gccgctttgtgtgatgaattgacagagaataaaaaggcagtagcactgagtatcgaatca
aaacaaactcgacttgataatcttgctccacaacttcgcactatattagaagcaagcaag
ccattacaagaaagtcttggtttgttgttggataaagttagacaggaacatcataaagcg
acattacttgcatcaccactatatgttctttatgcaaaggcatctgcatacagagatgca
tatgataattctataatagtaaaagtagaaggtgatgaagaagaagcaaagcgtgcaaat
aatcaggatggattacaagaatctgattcagatgctgaaactgtctctgaaaatgttaca
gaagaaacacctgtacataaaaaaagacatcataggttatctagagaagctaggcaagaa
gagaaaagaacaaaactgttacaaaggcatcctttaaacgtaaagataattattaaattg
aaaaatgaaacaaaactgacattgcaattttattacatgatgtctctgaaagttgtaact
gtggaatcaaaattaaaaactgatggtattatgggcattagtacaggagatatgcttata
tcagaatcgattttacgggagttatatccacgagatttaggattagagagcccaaatcct
gctaattattatcagttgaatcggcataatttaggccaattttcatcacttggattagga
atcccatataaatgggcacaaagaatggctggattacattttatttcactggatacgaga
gagcaaaaatttacgagttgtgaaataacacaagatagtgttgaatgtgtgttgagagaa
atcaaaagacgtgtaatagcaagattagagttatgtacggagattagacaattagaatgc
ggaaatttcccaaactttactgctaataacgatattttaccacaaaaacttagtacaatt
ttacaaaaattctcaacaatttcatggagtaattattgtaatagtgtaaatcccattttt
caagaacaaggattagtatcttcattggacatcttttatgaggctatacttcgtcggggc
aataatgaattaattgcaagaatagctataaaaccagattatccaaaaatagcaccagta
tttaatataagtataaatcctatagtacctgcatctgtggatattttaagagatattgaa
agggaagtaaatgtcatgtggataaaaccgccgacattatctgcgcaacttcagcgatta
cgagcatgtttcgacatttatttggaatctgaaactattataccaaaagaaaagatcttc
ttccatcctgtaaaaggtcgtattcgtgctagaccatataaatatttagagctaggtggt
ggaatttttattcatcgctaa
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