Bombus affinis (rusty patched bumble bee): 126920426
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Entry
126920426 CDS
T09368
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126920426
Spliceosome [BR:
baff03041
]
Common components
Common spliceosomal components
General mRNP proteins
126920426
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
Nup35_RRM_2
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
126920426
NCBI-ProteinID:
XP_050586720
LinkDB
All DBs
Position
9:complement(11651114..11659963)
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AA seq
532 aa
AA seq
DB search
MRGISESSPTRAMAEDLDVEAMLEAPYKKGEQDSSSKDKSSKENGSSRKSSGKSKHRSRS
RSRSRDRREKDRRDRDRDRDRDRDRDRDRERDRDRDRDRRRRSRSRDRRDRDRDRDNSDR
DRDRRDRDRDRDRRRKRSLTPITLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQL
SQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLG
VPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNI
QLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLL
DTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMSTPQPPPQAAPPIA
TQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIA
TAVAAVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRRGM
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtatttcagaaagctcaccgactcgcgcaatggcggaggatttggatgtcgag
gcaatgctggaggcgccatataagaagggggagcaggactcctcatccaaagacaaatct
tccaaggagaatgggtctagccgtaaatcatctgggaagagcaagcatcgttctcgttcc
cgctctcgatcacgggaccgtcgggagaaagatcgtcgcgatcgcgaccgagatcgagac
agagatcgagatcgtgacagagatagagagcgcgatcgtgatcgtgatcgtgaccgtcga
cgtagatcaagatcaagagatcgaagagaccgcgatagagacagggataacagcgataga
gatagggatcgacgggatagagaccgagatcgagacagaagaaggaagcgatccctcaca
ccaattacacttcccagagcaagactaccatttggaaagggtgtcagtccccttggcatc
agaaatgatgagctaacaccagaggaacgggacgccagaacggtgttctgtatgcaatta
agtcagcgtatacgtgctcgagatttggaagaattcttttcgagtgtgggcaaagttcaa
gatgtccgacttatcacatgcaacaaaacaagaagatttaagggtatagcatatgtagag
ttcaaggatcctgaaagtgtgacattggcacttggtttgtcgggtcagaagcttctcggt
gttcccatagtagtacagcatactcaagctgaaaagaatcgcatgggtaattccatgcca
aatctaatgccaaaaggtcagaccggacctatgaggttatatgttggatctctacatttt
aatattacagaagatatgcttcgcggtattttcgaaccgtttggaaaaattgataacatt
caactgatcatggatccggaaaccggtcgaagcaaaggctatggattcttgacttttaga
aatgctgatgatgcgaaaaaagctttggaacagttgaatggctttgaacttgctggaaga
cctatgaaagtcggtaatgttacagaacgtacagacttaatacagggtccatctcttctt
gacacagacgaattagatcgaagtggtatcgatcttggtgctactggaaggttacagcta
atgttcaaattagcggagggaactgggcttgaaattccccctgcagctgcaaatgcacta
aatatggctcctgttatgtcaacaccacaaccacctccacaagctgctcctcctatagcg
acacagtgctttatgttatctaatatgttcgacccacaaaatgagacaaatccgaattgg
gccaaagaaattcgtgacgatgttattgaggaatgcaacaaacacggtggtgtattacat
gtgtacgtggaccaagcctcacctcagggtaacgtttacgttaagtgcccgtcaatagcg
acagcagttgcggctgtcaattcgttacatggtagatggtttgctggtcgagtgattaca
gctgcttacgtgccagttgtaaattatcactcactattcccagacgcgatgacggcttta
caattactagttccgagtgctccacgaaggggaatgtga
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