Bombus affinis (rusty patched bumble bee): 126920460
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Entry
126920460 CDS
T09368
Name
(RefSeq) ATP-dependent helicase brm
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126920460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126920460
03036 Chromosome and associated proteins [BR:
baff03036
]
126920460
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126920460
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
126920460
Chromatin remodeling factors
BAF complex
126920460
PBAF complex
126920460
GBAF(ncBAF) complex
126920460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
AAA_8
Motif
Other DBs
NCBI-GeneID:
126920460
NCBI-ProteinID:
XP_050586788
LinkDB
All DBs
Position
9:5029374..5045804
Genome browser
AA seq
1340 aa
AA seq
DB search
MTGTDQIGPTGSGSPPGVIQENINSLQKAIETMEEKGLQEDPRYSQLLALRARQSNMGEK
QVFTTQQLQQLRIQIMAYRSLARNQPLSQQLALAVQGGASPPLGVGQRTPVDPSQGPVST
APQISGSNLIGPAIFPRAGCQTPQLPPQPYVKANKVTTVAKPVGLDPLLILQERENRVAT
RIALRMEQLNSLPTNMPEDLRIQVQIELRMLRVLNFQRQLRSEILACTRKDTTLESAVNV
KAYKRTKKQGLREARATEKLEKQQRLEAERKRRQKHQEFINSVLQHGKDFKEFSRNNVAK
LARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQ
TDEYIGNLTEMVKQHKIEQKKKQVEARKLKKKKKKQQDGEEGDDGDEDTRVGVIETATGC
TLTGEEAPLMSQLSAFLESHPGWEPIESESEEDRDDEEEANEGEEKGEKSTGDLDEEKVK
KTIQKAKVEDDEYKTEEQTYYSIAHTVHEIVTEQASIMVNGKLKEYQIKGLEWLVSLFNN
NLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVI
VSYKGSPINRRAIQSQMRATKFNVLLTTYEYVIKDKAVLAKLQWKYMIIDEGHRMKNHHC
KLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG
EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCEMSGLQKVLYKHM
QSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGIV
TGPDLYRASGKFELLDRILPKLKVTNHRVLLFCQMTQLMTIMEDYLNWRGFKYLRLDGAT
KAEDRGGLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA
HRIGQKNEVRVIRLMTVNSVEERILAAAKYKLNMDEKIIQAGMFDQKSTGSERQQFLQSI
LHQDDAEDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGLNRKSRLLEEA
ELPDWLVKDDDEVEKWASEEEEDKFLGRGSRQRKEVDYTDSLTEREWLKAIDEDVAEYEE
EEEDDKKKKNTRRRKKKGEEDNELVLKKRKRTSIDPKIKRTLKKLLTAVINYADGTGRIL
SEPFMKLPSKRELPDYYEIIKKPLTINKLLQKIEEGKYTDFDELEKDFMQLCKNAQIYNE
ETSLIYEDSIVLQSVFMDARQRIEEEGNISDINDKDQGEEGSDADSSVRRKIKLKEKKIE
GRGSRRRKVIKRYISDDDDN
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgactggtactgatcaaattggccctactggatctggaagtccacctggtgtcatacaa
gaaaatataaattctttgcaaaaggctattgagaccatggaagagaaaggtcttcaagaa
gatccacgttattctcagttacttgctttaagggctcgtcaaagcaacatgggagagaaa
caagttttcactacacaacaattacaacaattgcggatacaaataatggcataccgatca
ttggcaagaaatcaaccattatctcagcaacttgcacttgccgttcaaggtggagcatct
cctcctttaggtgtgggacaacgtacccctgtggatccatctcaaggacctgtttctaca
gctccacaaatctctggctcaaacttaattggtccagcaatttttccaagagcaggttgt
cagacgccacaacttcctcctcaaccatatgttaaagctaacaaagtgacaactgtagca
aaaccagttggtttagacccgttactgattttacaagaacgtgagaacagagttgcaacg
cgcatagcattacgaatggaacaattgaacagtttgccaactaacatgccagaagatctt
cgtattcaagttcaaatagaactacgaatgcttagagtattaaattttcaaagacaacta
cgatcagagattttagcgtgcactcgaaaggatactactttagaaagtgcagtgaatgta
aaggcttataaacgtacgaaaaaacaaggtcttcgagaagctagagctaccgagaaactc
gaaaaacaacaaagattggaagctgaacgtaaacgcagacagaaacatcaagaatttatt
aattctgtacttcaacatggtaaagatttcaaggaattttctcgaaataatgtggccaag
ttggccagacttaacaaagctgttctcaattatcatgcaaatgctgaaagagagcagaag
aaagaacaagagcgtatcgagaaagaacgtatgagacgtctaatggcagaagacgaagaa
ggttacagaaaactgattgatcaaaagaaagacaaacgattagcatttctgttgtcacag
acagatgaatatatcggtaatcttactgagatggtaaagcaacataagatagaacaaaaa
aaaaagcaggtggaagcacgaaagcttaagaagaaaaagaagaagcaacaagatggtgaa
gaaggtgatgatggagatgaagatactcgtgttggagtgattgaaacagctactggctgc
acattaactggcgaagaagctccactaatgagtcaactttcagcatttttagaatctcat
ccaggttgggaaccaattgaatcagaaagtgaagaagatagagatgatgaagaagaagca
aacgaaggtgaagaaaaaggtgaaaagtctactggcgatttagacgaagaaaaagttaag
aaaacgatacagaaagccaaagtagaggatgatgaatacaaaaccgaagaacaaacatat
tatagtattgcacacaccgttcatgagatagtaacagagcaagcatctatcatggtcaat
ggaaaattgaaagaatatcaaataaagggcttggaatggttagtttcattatttaacaat
aatctgaatggtatacttgcggatgaaatgggtctcggtaaaactattcaaacaatagct
ttagtgacttatcttatggagaaaaaaaaagtgaatggcccattccttataattgttcct
ttatcaacgttatcaaattgggtgcttgaatttgagaaatgggctcccagcgtcgtaatt
gtatcatataaaggttcaccaattaatagaagagctattcagtctcaaatgagagctact
aaattcaacgttttacttactacatacgaatacgttattaaagacaaagcggtcttagca
aaattgcagtggaagtacatgattatagatgaaggacatcgaatgaaaaaccaccattgt
aagctaactcaagtgctaaatactcattatctggctcctcatcgactcttattgacagga
acgccattgcaaaataaattgcctgaattatgggcattattaaatttcttacttccttca
atcttcaaatcttgcagtacttttgaacaatggtttaatgctccatttgcaaccactggc
gaaaaagtcgaactaaatgaagaagaaactattcttattattcgtcgattacataaagta
ttacgtcctttcttattgagacgtttaaaaaaagaagttgagtcacagttacccgacaaa
gtagaatatattataaagtgtgaaatgtctggactgcaaaaagttctctataaacacatg
cagagcaaaggtgtattgttaactgatggctcagaaaaaggaaaacagggtaaaggaggt
gctaaagctctaatgaatactattgtgcagttaagaaaattatgcaatcacccattcatg
tttcaagctattgaagaaaaatactgcgagcatgtaggtacacaaggatctggtatcgtt
actggtcccgatttgtaccgtgcatctggaaaatttgaattgttagatcgtattcttccg
aaattgaaagtaacaaatcacagggtactattattctgccaaatgacacagttaatgaca
attatggaagattatttaaattggagaggatttaaatatttgcgattagatggtgctaca
aaagctgaggatcgaggaggtttactaaaaaaattcaatgatcctggttctgaatacttc
ttatttttgttatcaacccgtgccggtggtcttggattaaatttgcaagctgcagatacc
gttattatttttgattctgattggaatccacaccaggatttacaagcacaggatagagca
catagaattggtcaaaaaaatgaagtacgtgtaatcagattaatgacggttaattcagtt
gaagaaagaatattagctgcagccaaatacaagttaaatatggatgaaaagattatacaa
gcaggtatgttcgatcagaagtccactggttctgaacgacaacaatttttacaaagcatt
ttgcatcaagatgatgctgaagatgaagaagaaaatgaagtaccagacgatgaaacggtt
aatcagatgatcgcacgaacggaaggtgaatttgaaatattccaaaaattagatttagaa
cgaagaagggaagaagcaaagctggggctaaatagaaaatctcgattattagaagaagct
gagttgcccgattggttagtaaaagatgatgatgaagttgaaaagtgggcgtccgaagaa
gaagaagataaattccttgggcgtggctcgagacaacgaaaagaagttgattatactgac
agtttaactgaaagagaatggctcaaagcaatcgacgaagatgttgctgaatatgaggaa
gaggaggaagacgataaaaaaaagaagaatacacggaggcggaagaaaaagggcgaggaa
gacaatgagcttgtgctaaagaaacgaaaaagaacttcaattgatccaaaaataaaacga
actttgaagaagttgcttacggcagtcattaattacgctgatggcacaggtagaattctc
agcgaaccgtttatgaagttaccatccaaaagagaattaccggattattatgaaattatt
aaaaaaccattaactatcaataaattacttcaaaagatcgaagaaggaaagtacactgac
tttgacgagcttgaaaaagattttatgcagctttgcaaaaacgcacaaatttataatgaa
gaaacttctctcatatacgaagattccattgttctacaatctgttttcatggatgcacgt
caacgaattgaagaggaaggcaatatttctgacataaatgataaagatcaaggtgaagaa
ggatcagatgcagattctagtgttagaagaaaaattaaattgaaagaaaagaagattgaa
ggtagaggaagtcggagaaggaaagtcattaaaagatatatatcagatgatgatgacaat
tga
DBGET
integrated database retrieval system
