Bombus affinis (rusty patched bumble bee): 126920647
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Entry
126920647 CDS
T09368
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04517
IgSF CAM signaling
baff04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126920647
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126920647
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
baff04812
]
126920647
Cytoskeleton proteins [BR:
baff04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
126920647
Intermediate filaments
Intermediate filament-binding proteins
126920647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
126920647
NCBI-ProteinID:
XP_050587261
LinkDB
All DBs
Position
9:12366138..12405098
Genome browser
AA seq
2402 aa
AA seq
DB search
MTTDISVVRGGWDPTLQQEIVDEYEYDGGNSSSRLFERSRIKALAGERELVQKKTFQKWV
NSHLVRCSCRIGDLYVDLRDGKMLIKLLEILSGERLPRPTKGKMRIHCLENVDKALQFLR
EQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFDKLSKSNAIYNLNNAFNVAEDK
LGLTKLLDAEDIFVDHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDRMI
HEYESLTSDLLRWIEGTIEALGDRRFANSLVGVQSQLSQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA
ARFNRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVMAV
SQELEAENYHDIERINARKDNVLRLWNYLLELLRARRMRLELSLQLQQNFQEMLYILDSM
EEIKMRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQRFLEHGEGYRPC
DPTIIVERVQQLEDAYAELVRLAVERRARLEESRKLWQFYWDMADEENWIKEKEQIVSTG
DIGHDLTTINLLLSKHKALENEIQSHEPQLMSVAAVGDELVRQKHFGSDRIQERLQEILG
MWNHLLDLAAFRRKRLEEAVDYHQLFADADDIDIWMLDTLRLVSSEDVGRDEANVQSLLK
KHKDVTDELKNYATTIDQLRQQASSLGEQDAKSPEVLERLDSIDSRYKELMELAKLRKQR
LLDALSLYKLFSESDGVEQWIGEKNRMLETMVPAKDIEDVEIMKHRYNGFEKEMYANASR
VAVVNQLARQLLHVEHPNSEQIVARQNELNQKWAELREKAENKREELNSAHGVQTFHIEC
RETVSWIEDKKRILQQTDSLEMDLTGVMTLQRRLSGMERDLAAIQAKLDALEMEAQNIQQ
QNLEDPEVIKGRIDQIHTIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQAWLRRTQTD
VASEDTPTTLADAEKLLTQHQNIKEEIDNYTDDYQKMMEYGERLTSEAGDGDTQYMFLRE
RLNALKMGWEDLRQMWVNRKILLSNSLNLQIFDRDARQAEVLLSQQEHILAKDETPANFE
QAEHMIKRHEAFMTTMDANDEKINSVVQFAGRLVDEGHFAADKVKKKAESINERRRINRE
KANQYMEKLKDQLQLQMFLQDCEELGEWVQEKHITAQDETYRSAKTVHSKWTRHQAFEAE
IASNKDRLQQLQQAAEELIQQKPDLAEIIKPKVAELADQFEELETTTHDKGERLFDANRE
VLIHQTCDDIDSWMNELEKQIESTDTGSDLASVNILMQKQQMIETQMAVKARQVTELDKQ
AEHLQRTVPDDKMEEIKCKKEKVAQRFAQLKAPLIDRQRQLEKKKEAFQFRRDVEDEKLW
IAEKMPQATSTEYGNSLFNVHMLKKKNQSLRTEIENHEPRINLVCNNGQKLIDEGHEDSP
EFQKLIPELTEKWKELKHAVDDRNKHLLQNEKAQQYFFDATEAESWMSEQELYMMVEDRG
KDEISAQNLMKKHESLEHAMEDYAETIRQLGETARQLINDQHPLVDQIAVKQSQVDKLYA
GLKDLAGERRAKLDDALQLFMLNREVDDLEQWIAERELVAGSHELGQDYDHVTLLWERFK
EFARDTEAIGSERVAAVNGIADSLMASGHSDAATIAEWEDGLNEVWQDLLELIETRTQML
EASKELHKFFHDCKDVLGRILEKQNAMSDELGRDAGSVSALQRKHANFMQDLSTLQSQVS
QIQEESATLQASYCGDKAREITNREGEVVAAWNNLQSLCDGRRTKLEDTGDLFRFFNMVR
TLMIWMDDVVRQMNTSEKPRDVAGVELLMNNHQSLKAEIDAREDNLMACINLGKDLLARN
HYASSQIKEKLAALTDHRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLVAQEPYLM
SQELGHTIDEVENLIKKHEAFEKSAAAQEERFSALHRLTTFELKEMKRREQEREEEERRK
KEEAAAAEAARLAKATPVTSPDEPPSERAEAEGVPTGERPAGEDESHVAHRKASTRTPQP
QDKPKEVHAQKPARLSMRGEATPPATTPLKPSQGLSSPTTPKGGSGSESGTLRRKERSRS
KSPFRSFRWRKSAKSPSLDRSGVSDDERSISEQRSPTDDEFEGVLQRKHEWESTTKKASN
RSWHKVYMVVRGQSLFVYTDQKSYKAAPDQPYKGESPLDLRGATITVASDYTKKKHVFRV
KSQSGSDFLFQAKDDAEMNDWVTVLNQAAQGTSGAGTSRAHTLPAPTQAETKRRSFFTLK
KN
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcggtggtgcgcgggggttgggaccccacgctacaacaagagatt
gtcgatgagtacgaatacgacgggggaaactcgagttcgagactttttgaacgttcacgc
atcaaagctttagctggtgaacgtgaattggtacaaaagaagactttccaaaaatgggtc
aattcccatctggttcggtgttcatgccgaattggcgatctatacgtcgatcttcgagat
ggcaaaatgctcatcaagcttctcgagattctctccggagaacgtttaccacgacctacg
aaaggaaaaatgcgaatccattgtctagaaaacgtcgataaagcgttgcaattccttcgg
gagcaacgagtgcatctagaaaatatgggatctcacgacatagtcgatggaaatcctcgt
ttgagtcttggtctcatctggaccatcatcctgcgattccaaattcaagacattaccatc
gaagaaacggacaatcaagaaacgaaatcagcgaaagacgctctacttctttggtgtcaa
atgaaaactgctggatatcacaatgtaaatgtacgaaatttcactacatcctggcgcgat
ggtttagccttcaacgccatcatccataaacaccgtccggatttgatccagttcgataaa
ctttccaaatcaaatgctatttacaatttaaacaacgcgttcaatgtagccgaagacaag
cttggtctgacgaaacttttagatgctgaagacatattcgtcgatcatcctgacgaaaaa
tcaatcatcacttatgtagtcacgtattatcattacttttcaaagatgaaacaggagacc
gtgcaaggtaaaagaataggcaaagtggttggtattgctatggagaatgaccgtatgata
cacgagtacgaaagtttaaccagtgacctattgagatggatagaaggcacaatagaggct
ttaggtgatcgccggtttgctaactctttagtaggagtgcaatctcagctctcccaattc
tctaattatcgtactgtagagaaacctccgaagtttgtcgagaaaggcaatctggaggtg
ttgctgttcactttacagtcgaagatgcgagccaataatcaaaaaccatatacgcctaaa
gagggtaagatgatctcggacattaacaaagcgtgggagaggctagaaaaggcggaacac
gagcgtgaattggctctgcgtgaagaattgattcgtcaggagaaattggaacaactagca
gctagattcaaccgaaaggctagcatgagagagacctggttgtccgagaatcaacgtttg
gtttctcaggataatttcggtttcgatttagctgctgtggaagctgcagccaagaagcac
gaggccatcgagacagacatctttgcctatgaagaacgagttcaagctgttatggctgta
tcacaggaattggaagctgagaattatcacgatatcgaacgtattaatgcccggaaagac
aatgttcttagattgtggaattatctgctcgaattgcttcgtgctagaaggatgagatta
gaattgtctttgcagctccaacagaacttccaagagatgctgtacattctagacagtatg
gaagaaataaaaatgcgtctgttgaccgacgattatggaaagcacttgatgggcgtcgag
gatcttttgcagaaacattctctggtagaagctgatatcaacgtgttgggcgaaagagtg
aaagctgtcgttcaacagagccagagattcttagaacacggagaaggttatcgaccgtgt
gatccgaccatcattgttgaacgcgtacaacagctcgaagacgcgtacgctgaattggta
cgcctggcagtcgaacgcagagccagattggaagaatctcgtaaattgtggcagttctat
tgggacatggccgacgaggagaattggataaaggagaaagaacagatcgtatcgactgga
gacattggtcacgatttgacgactataaatctgctgttgtccaaacacaaagcactggag
aatgaaattcagtctcatgaaccgcaattaatgtctgtggctgctgttggagatgaactg
gttcgtcagaaacactttggttctgataggattcaggagagactccaagaaattctggga
atgtggaatcatctcctggatttggccgctttcagaaggaagcgcttggaggaggctgta
gactatcatcaactgtttgcagatgctgatgacattgatatttggatgctggatacacta
cgactcgtatcatcagaagacgttggcagagacgaagccaatgtccaatcgttgttgaag
aaacacaaagatgtgacagatgaactcaagaactacgctacaactatcgatcagcttcgt
cagcaggcatcgtctcttggtgagcaggatgctaagtcaccggaagtgctggaaagactg
gactccatagactccagatacaaggaacttatggaactcgccaagcttcgcaaacagaga
ttgttggatgcattatcattgtacaagttgttcagcgagtcagacggagtggagcaatgg
atcggtgagaagaataggatgttggagactatggtaccagcgaaggatatcgaagacgtt
gagattatgaagcacagatacaatggtttcgaaaaggaaatgtatgccaacgcttcgcga
gttgctgtggtcaatcaactcgcaagacaattattgcacgttgaacatcccaattctgag
cagatcgttgcacgtcagaacgagttgaaccagaaatgggctgagctccgcgagaaagca
gagaacaaacgtgaagaattgaactctgctcatggcgtacagaccttccacattgaatgc
cgcgagacagtatcttggatcgaggataagaaacgtatccttcaacaaacagacagttta
gagatggatctgactggagtcatgaccttgcaacgtcgactaagtggaatggagcgcgac
ttggcagccatccaggctaaattggacgccttggaaatggaggctcagaatatccaacaa
cagaatctggaagatcctgaggtgatcaagggaaggattgatcagatacacactatttgg
gagcaattgacacagatgttgaaggaacgtgatgcaaaattggaagaagcaggtgatctt
cacagattcctcagagatttggatcacttccaggcttggttacgcaggacacaaactgat
gtggccagcgaagatactccaactaccttggctgatgctgagaaactcttgacacaacac
cagaatattaaggaagagattgataattataccgatgactaccagaagatgatggagtac
ggcgagagattgaccagtgaagctggtgatggtgatacacagtacatgttccttagggag
agattaaacgccctgaagatgggctgggaggatttacgccagatgtgggtcaacagaaag
atcttattgtccaattctcttaatctgcaaatcttcgatcgcgacgcacgccaggcagaa
gtgcttttgtcccagcaagagcacattctcgctaaggatgaaacgccggcgaacttcgaa
caagcggagcacatgatcaagcgtcacgaggcgttcatgactacgatggacgcgaacgac
gagaaaatcaactccgtggtgcagttcgctggacgacttgtcgacgagggccacttcgcg
gcggacaaagtcaagaagaaggcagagagcattaacgagcgtcgtcgaataaatcgagag
aaggcgaatcagtatatggagaaactcaaggatcagttacagttgcagatgttcttacag
gattgcgaagaattgggtgaatgggttcaggagaagcatatcaccgctcaagatgaaact
tatagaagtgccaagacggtgcatagcaagtggacaaggcaccaggcgtttgaggctgaa
atcgcgagtaataaggatcgtctgcagcaattacaacaggctgctgaagaattgattcaa
cagaagcctgatctagctgagattatcaagcctaaagtggcagaactggctgaccagttc
gaggaacttgagaccactactcatgacaaaggtgaacgcctgttcgacgccaatcgtgaa
gttcttattcaccagacttgcgacgatattgattcttggatgaacgaactggagaaacag
attgaaagcaccgatactggttctgatttggcatcggtgaatatcttgatgcagaaacaa
caaatgatcgaaactcagatggctgtgaaagcgagacaggtcacagagttggacaaacag
gctgaacacttgcaacgtacggtgcctgacgacaagatggaggagattaagtgcaagaag
gagaaggtggctcagagattcgcccaactgaaagcaccattaatcgatcgtcaacgtcag
ttagagaagaagaaggaagctttccagttcaggcgcgacgtggaagacgagaagctctgg
atcgccgagaagatgcctcaggctaccagtacggagtacggaaattcattattcaacgtg
cacatgcttaagaagaagaaccagtctctgcgtactgaaatagagaatcatgaaccaaga
atcaatctggtctgtaataacggacagaaacttatagacgagggccacgaggatagtcct
gagttccagaaattgatacccgagttaaccgagaaatggaaggagctgaagcatgctgta
gacgacaggaacaagcatctcttgcaaaacgaaaaggcacagcagtacttctttgacgcg
acagaagcggaatcctggatgagcgaacaagaattgtatatgatggtagaagaccgtggc
aaggacgaaatttcagcccagaacttaatgaagaaacacgagtctttggaacatgccatg
gaagattatgcagagaccatccgccagcttggagaaaccgccaggcagctcattaacgat
caacatcctcttgttgaccagattgctgtgaaacaatcacaagtagacaaattgtacgct
ggtttgaaagatcttgctggtgaacgtcgagctaaattagacgacgctcttcaattattc
atgttgaacagagaagtggacgatcttgaacagtggatcgcagaaagagaattggtagct
ggaagccacgaattaggtcaggattacgatcatgtgacgctcctttgggagaggttcaaa
gagtttgctcgagataccgaggcgataggctcggaaagagtggcggcagtgaatggaatt
gcagattctctaatggcaagtggtcactccgatgctgctactattgcagaatgggaggat
ggtttgaacgaagtctggcaagatctgctagaattgatcgagactcgtacgcaaatgctg
gaagctagtaaagaactgcacaagttcttccacgattgcaaagacgtgcttggaagaatc
ttggagaaacagaacgctatgtctgacgaattaggtcgtgacgctggctcagtctcagct
ttgcagaggaagcacgccaactttatgcaggatttatccacgttgcagagccaggtgtcg
cagatccaagaggaatctgctacgttacaagctagttattgtggagacaaggctagagag
atcactaatcgcgaaggagaggtagttgctgcttggaacaatcttcaatcgctttgcgat
ggtagaagaacgaaactggaggataccggtgatctgttccgattcttcaacatggttagg
actctgatgatttggatggatgacgtagttcgtcagatgaacacttcggagaaacctcgc
gacgttgctggagtggaattactaatgaacaatcatcaaagtttgaaagccgaaatagat
gctagagaggacaacctgatggcgtgtatcaatcttgggaaagacttgttagccaggaac
cactatgctagtagccagatcaaggagaaattggcagctttaactgatcacagaaacgcg
ttgctgcatagatgggaggaacgttgggagaatctacaactgattttggaggtctatcaa
ttcgcaagagacgcagcggttgctgaagcatggttagtcgcccaggaaccatatcttatg
agtcaagaactcggccacacaatcgatgaagtagagaatttgattaagaagcacgaagcg
tttgaaaaatcggcagctgctcaggaagaaaggtttagtgccttgcatcgactcactacg
tttgagttgaaagaaatgaagaggagagaacaagaacgagaggaagaagaaagacgcaag
aaagaggaggccgcagcagccgaggcagctcgattagctaaagcaacaccagtaactagt
ccagacgaaccaccgagcgaaagagccgaagcagaaggtgtaccaactggagaacgtcct
gccggagaagacgaatcacatgtggcacatcgcaaggcttctacacgtacaccacaacct
caagacaagcccaaggaagtgcatgctcagaaacctgcacgtctatccatgcgaggagaa
gcaacaccacctgccaccacccccttgaaaccttcgcaaggtctgtctagtccaacaact
ccgaaaggtggaagcggttccgagtctggtactttaagacgtaaggaacgtagtcgcagc
aagtcgccgttcaggagtttccgctggagaaagtccgccaagtcgccgagtttagatcga
agtggcgtgagtgacgatgagcgcagtatttccgaacaacgaagtcccaccgatgatgaa
ttcgagggcgtgttgcaacgaaagcacgaatgggagagcacaacgaagaaggcgtctaat
cggtcctggcacaaagtgtacatggtcgttcgtggacagagcttgtttgtatataccgac
caaaaatcatacaaggcagcgcctgatcaaccgtacaagggagagtctcctctggacctt
agaggagcgactattactgtggcgagcgattacactaagaagaaacatgtcttccgagta
aagtcacaaagcggatcagacttcctattccaggctaaggatgatgctgaaatgaatgac
tgggttaccgtgttgaaccaagcagcacagggtacttcaggtgcgggtacgtctagggcg
cacactctacccgcgcctacacaagccgagaccaagcggcgtagtttcttcactctcaag
aaaaactaa
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integrated database retrieval system
