Bombus affinis (rusty patched bumble bee): 126920647
Help
Entry
126920647 CDS
T09368
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126920647
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
baff04812
]
126920647
Cytoskeleton proteins [BR:
baff04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
126920647
Intermediate filaments
Intermediate filament-binding proteins
126920647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
126920647
NCBI-ProteinID:
XP_050587261
LinkDB
All DBs
Position
9:12366138..12405098
Genome browser
AA seq
2402 aa
AA seq
DB search
MTTDISVVRGGWDPTLQQEIVDEYEYDGGNSSSRLFERSRIKALAGERELVQKKTFQKWV
NSHLVRCSCRIGDLYVDLRDGKMLIKLLEILSGERLPRPTKGKMRIHCLENVDKALQFLR
EQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFDKLSKSNAIYNLNNAFNVAEDK
LGLTKLLDAEDIFVDHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDRMI
HEYESLTSDLLRWIEGTIEALGDRRFANSLVGVQSQLSQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA
ARFNRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVMAV
SQELEAENYHDIERINARKDNVLRLWNYLLELLRARRMRLELSLQLQQNFQEMLYILDSM
EEIKMRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQRFLEHGEGYRPC
DPTIIVERVQQLEDAYAELVRLAVERRARLEESRKLWQFYWDMADEENWIKEKEQIVSTG
DIGHDLTTINLLLSKHKALENEIQSHEPQLMSVAAVGDELVRQKHFGSDRIQERLQEILG
MWNHLLDLAAFRRKRLEEAVDYHQLFADADDIDIWMLDTLRLVSSEDVGRDEANVQSLLK
KHKDVTDELKNYATTIDQLRQQASSLGEQDAKSPEVLERLDSIDSRYKELMELAKLRKQR
LLDALSLYKLFSESDGVEQWIGEKNRMLETMVPAKDIEDVEIMKHRYNGFEKEMYANASR
VAVVNQLARQLLHVEHPNSEQIVARQNELNQKWAELREKAENKREELNSAHGVQTFHIEC
RETVSWIEDKKRILQQTDSLEMDLTGVMTLQRRLSGMERDLAAIQAKLDALEMEAQNIQQ
QNLEDPEVIKGRIDQIHTIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQAWLRRTQTD
VASEDTPTTLADAEKLLTQHQNIKEEIDNYTDDYQKMMEYGERLTSEAGDGDTQYMFLRE
RLNALKMGWEDLRQMWVNRKILLSNSLNLQIFDRDARQAEVLLSQQEHILAKDETPANFE
QAEHMIKRHEAFMTTMDANDEKINSVVQFAGRLVDEGHFAADKVKKKAESINERRRINRE
KANQYMEKLKDQLQLQMFLQDCEELGEWVQEKHITAQDETYRSAKTVHSKWTRHQAFEAE
IASNKDRLQQLQQAAEELIQQKPDLAEIIKPKVAELADQFEELETTTHDKGERLFDANRE
VLIHQTCDDIDSWMNELEKQIESTDTGSDLASVNILMQKQQMIETQMAVKARQVTELDKQ
AEHLQRTVPDDKMEEIKCKKEKVAQRFAQLKAPLIDRQRQLEKKKEAFQFRRDVEDEKLW
IAEKMPQATSTEYGNSLFNVHMLKKKNQSLRTEIENHEPRINLVCNNGQKLIDEGHEDSP
EFQKLIPELTEKWKELKHAVDDRNKHLLQNEKAQQYFFDATEAESWMSEQELYMMVEDRG
KDEISAQNLMKKHESLEHAMEDYAETIRQLGETARQLINDQHPLVDQIAVKQSQVDKLYA
GLKDLAGERRAKLDDALQLFMLNREVDDLEQWIAERELVAGSHELGQDYDHVTLLWERFK
EFARDTEAIGSERVAAVNGIADSLMASGHSDAATIAEWEDGLNEVWQDLLELIETRTQML
EASKELHKFFHDCKDVLGRILEKQNAMSDELGRDAGSVSALQRKHANFMQDLSTLQSQVS
QIQEESATLQASYCGDKAREITNREGEVVAAWNNLQSLCDGRRTKLEDTGDLFRFFNMVR
TLMIWMDDVVRQMNTSEKPRDVAGVELLMNNHQSLKAEIDAREDNLMACINLGKDLLARN
HYASSQIKEKLAALTDHRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLVAQEPYLM
SQELGHTIDEVENLIKKHEAFEKSAAAQEERFSALHRLTTFELKEMKRREQEREEEERRK
KEEAAAAEAARLAKATPVTSPDEPPSERAEAEGVPTGERPAGEDESHVAHRKASTRTPQP
QDKPKEVHAQKPARLSMRGEATPPATTPLKPSQGLSSPTTPKGGSGSESGTLRRKERSRS
KSPFRSFRWRKSAKSPSLDRSGVSDDERSISEQRSPTDDEFEGVLQRKHEWESTTKKASN
RSWHKVYMVVRGQSLFVYTDQKSYKAAPDQPYKGESPLDLRGATITVASDYTKKKHVFRV
KSQSGSDFLFQAKDDAEMNDWVTVLNQAAQGTSGAGTSRAHTLPAPTQAETKRRSFFTLK
KN
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcggtggtgcgcgggggttgggaccccacgctacaacaagagatt
gtcgatgagtacgaatacgacgggggaaactcgagttcgagactttttgaacgttcacgc
atcaaagctttagctggtgaacgtgaattggtacaaaagaagactttccaaaaatgggtc
aattcccatctggttcggtgttcatgccgaattggcgatctatacgtcgatcttcgagat
ggcaaaatgctcatcaagcttctcgagattctctccggagaacgtttaccacgacctacg
aaaggaaaaatgcgaatccattgtctagaaaacgtcgataaagcgttgcaattccttcgg
gagcaacgagtgcatctagaaaatatgggatctcacgacatagtcgatggaaatcctcgt
ttgagtcttggtctcatctggaccatcatcctgcgattccaaattcaagacattaccatc
gaagaaacggacaatcaagaaacgaaatcagcgaaagacgctctacttctttggtgtcaa
atgaaaactgctggatatcacaatgtaaatgtacgaaatttcactacatcctggcgcgat
ggtttagccttcaacgccatcatccataaacaccgtccggatttgatccagttcgataaa
ctttccaaatcaaatgctatttacaatttaaacaacgcgttcaatgtagccgaagacaag
cttggtctgacgaaacttttagatgctgaagacatattcgtcgatcatcctgacgaaaaa
tcaatcatcacttatgtagtcacgtattatcattacttttcaaagatgaaacaggagacc
gtgcaaggtaaaagaataggcaaagtggttggtattgctatggagaatgaccgtatgata
cacgagtacgaaagtttaaccagtgacctattgagatggatagaaggcacaatagaggct
ttaggtgatcgccggtttgctaactctttagtaggagtgcaatctcagctctcccaattc
tctaattatcgtactgtagagaaacctccgaagtttgtcgagaaaggcaatctggaggtg
ttgctgttcactttacagtcgaagatgcgagccaataatcaaaaaccatatacgcctaaa
gagggtaagatgatctcggacattaacaaagcgtgggagaggctagaaaaggcggaacac
gagcgtgaattggctctgcgtgaagaattgattcgtcaggagaaattggaacaactagca
gctagattcaaccgaaaggctagcatgagagagacctggttgtccgagaatcaacgtttg
gtttctcaggataatttcggtttcgatttagctgctgtggaagctgcagccaagaagcac
gaggccatcgagacagacatctttgcctatgaagaacgagttcaagctgttatggctgta
tcacaggaattggaagctgagaattatcacgatatcgaacgtattaatgcccggaaagac
aatgttcttagattgtggaattatctgctcgaattgcttcgtgctagaaggatgagatta
gaattgtctttgcagctccaacagaacttccaagagatgctgtacattctagacagtatg
gaagaaataaaaatgcgtctgttgaccgacgattatggaaagcacttgatgggcgtcgag
gatcttttgcagaaacattctctggtagaagctgatatcaacgtgttgggcgaaagagtg
aaagctgtcgttcaacagagccagagattcttagaacacggagaaggttatcgaccgtgt
gatccgaccatcattgttgaacgcgtacaacagctcgaagacgcgtacgctgaattggta
cgcctggcagtcgaacgcagagccagattggaagaatctcgtaaattgtggcagttctat
tgggacatggccgacgaggagaattggataaaggagaaagaacagatcgtatcgactgga
gacattggtcacgatttgacgactataaatctgctgttgtccaaacacaaagcactggag
aatgaaattcagtctcatgaaccgcaattaatgtctgtggctgctgttggagatgaactg
gttcgtcagaaacactttggttctgataggattcaggagagactccaagaaattctggga
atgtggaatcatctcctggatttggccgctttcagaaggaagcgcttggaggaggctgta
gactatcatcaactgtttgcagatgctgatgacattgatatttggatgctggatacacta
cgactcgtatcatcagaagacgttggcagagacgaagccaatgtccaatcgttgttgaag
aaacacaaagatgtgacagatgaactcaagaactacgctacaactatcgatcagcttcgt
cagcaggcatcgtctcttggtgagcaggatgctaagtcaccggaagtgctggaaagactg
gactccatagactccagatacaaggaacttatggaactcgccaagcttcgcaaacagaga
ttgttggatgcattatcattgtacaagttgttcagcgagtcagacggagtggagcaatgg
atcggtgagaagaataggatgttggagactatggtaccagcgaaggatatcgaagacgtt
gagattatgaagcacagatacaatggtttcgaaaaggaaatgtatgccaacgcttcgcga
gttgctgtggtcaatcaactcgcaagacaattattgcacgttgaacatcccaattctgag
cagatcgttgcacgtcagaacgagttgaaccagaaatgggctgagctccgcgagaaagca
gagaacaaacgtgaagaattgaactctgctcatggcgtacagaccttccacattgaatgc
cgcgagacagtatcttggatcgaggataagaaacgtatccttcaacaaacagacagttta
gagatggatctgactggagtcatgaccttgcaacgtcgactaagtggaatggagcgcgac
ttggcagccatccaggctaaattggacgccttggaaatggaggctcagaatatccaacaa
cagaatctggaagatcctgaggtgatcaagggaaggattgatcagatacacactatttgg
gagcaattgacacagatgttgaaggaacgtgatgcaaaattggaagaagcaggtgatctt
cacagattcctcagagatttggatcacttccaggcttggttacgcaggacacaaactgat
gtggccagcgaagatactccaactaccttggctgatgctgagaaactcttgacacaacac
cagaatattaaggaagagattgataattataccgatgactaccagaagatgatggagtac
ggcgagagattgaccagtgaagctggtgatggtgatacacagtacatgttccttagggag
agattaaacgccctgaagatgggctgggaggatttacgccagatgtgggtcaacagaaag
atcttattgtccaattctcttaatctgcaaatcttcgatcgcgacgcacgccaggcagaa
gtgcttttgtcccagcaagagcacattctcgctaaggatgaaacgccggcgaacttcgaa
caagcggagcacatgatcaagcgtcacgaggcgttcatgactacgatggacgcgaacgac
gagaaaatcaactccgtggtgcagttcgctggacgacttgtcgacgagggccacttcgcg
gcggacaaagtcaagaagaaggcagagagcattaacgagcgtcgtcgaataaatcgagag
aaggcgaatcagtatatggagaaactcaaggatcagttacagttgcagatgttcttacag
gattgcgaagaattgggtgaatgggttcaggagaagcatatcaccgctcaagatgaaact
tatagaagtgccaagacggtgcatagcaagtggacaaggcaccaggcgtttgaggctgaa
atcgcgagtaataaggatcgtctgcagcaattacaacaggctgctgaagaattgattcaa
cagaagcctgatctagctgagattatcaagcctaaagtggcagaactggctgaccagttc
gaggaacttgagaccactactcatgacaaaggtgaacgcctgttcgacgccaatcgtgaa
gttcttattcaccagacttgcgacgatattgattcttggatgaacgaactggagaaacag
attgaaagcaccgatactggttctgatttggcatcggtgaatatcttgatgcagaaacaa
caaatgatcgaaactcagatggctgtgaaagcgagacaggtcacagagttggacaaacag
gctgaacacttgcaacgtacggtgcctgacgacaagatggaggagattaagtgcaagaag
gagaaggtggctcagagattcgcccaactgaaagcaccattaatcgatcgtcaacgtcag
ttagagaagaagaaggaagctttccagttcaggcgcgacgtggaagacgagaagctctgg
atcgccgagaagatgcctcaggctaccagtacggagtacggaaattcattattcaacgtg
cacatgcttaagaagaagaaccagtctctgcgtactgaaatagagaatcatgaaccaaga
atcaatctggtctgtaataacggacagaaacttatagacgagggccacgaggatagtcct
gagttccagaaattgatacccgagttaaccgagaaatggaaggagctgaagcatgctgta
gacgacaggaacaagcatctcttgcaaaacgaaaaggcacagcagtacttctttgacgcg
acagaagcggaatcctggatgagcgaacaagaattgtatatgatggtagaagaccgtggc
aaggacgaaatttcagcccagaacttaatgaagaaacacgagtctttggaacatgccatg
gaagattatgcagagaccatccgccagcttggagaaaccgccaggcagctcattaacgat
caacatcctcttgttgaccagattgctgtgaaacaatcacaagtagacaaattgtacgct
ggtttgaaagatcttgctggtgaacgtcgagctaaattagacgacgctcttcaattattc
atgttgaacagagaagtggacgatcttgaacagtggatcgcagaaagagaattggtagct
ggaagccacgaattaggtcaggattacgatcatgtgacgctcctttgggagaggttcaaa
gagtttgctcgagataccgaggcgataggctcggaaagagtggcggcagtgaatggaatt
gcagattctctaatggcaagtggtcactccgatgctgctactattgcagaatgggaggat
ggtttgaacgaagtctggcaagatctgctagaattgatcgagactcgtacgcaaatgctg
gaagctagtaaagaactgcacaagttcttccacgattgcaaagacgtgcttggaagaatc
ttggagaaacagaacgctatgtctgacgaattaggtcgtgacgctggctcagtctcagct
ttgcagaggaagcacgccaactttatgcaggatttatccacgttgcagagccaggtgtcg
cagatccaagaggaatctgctacgttacaagctagttattgtggagacaaggctagagag
atcactaatcgcgaaggagaggtagttgctgcttggaacaatcttcaatcgctttgcgat
ggtagaagaacgaaactggaggataccggtgatctgttccgattcttcaacatggttagg
actctgatgatttggatggatgacgtagttcgtcagatgaacacttcggagaaacctcgc
gacgttgctggagtggaattactaatgaacaatcatcaaagtttgaaagccgaaatagat
gctagagaggacaacctgatggcgtgtatcaatcttgggaaagacttgttagccaggaac
cactatgctagtagccagatcaaggagaaattggcagctttaactgatcacagaaacgcg
ttgctgcatagatgggaggaacgttgggagaatctacaactgattttggaggtctatcaa
ttcgcaagagacgcagcggttgctgaagcatggttagtcgcccaggaaccatatcttatg
agtcaagaactcggccacacaatcgatgaagtagagaatttgattaagaagcacgaagcg
tttgaaaaatcggcagctgctcaggaagaaaggtttagtgccttgcatcgactcactacg
tttgagttgaaagaaatgaagaggagagaacaagaacgagaggaagaagaaagacgcaag
aaagaggaggccgcagcagccgaggcagctcgattagctaaagcaacaccagtaactagt
ccagacgaaccaccgagcgaaagagccgaagcagaaggtgtaccaactggagaacgtcct
gccggagaagacgaatcacatgtggcacatcgcaaggcttctacacgtacaccacaacct
caagacaagcccaaggaagtgcatgctcagaaacctgcacgtctatccatgcgaggagaa
gcaacaccacctgccaccacccccttgaaaccttcgcaaggtctgtctagtccaacaact
ccgaaaggtggaagcggttccgagtctggtactttaagacgtaaggaacgtagtcgcagc
aagtcgccgttcaggagtttccgctggagaaagtccgccaagtcgccgagtttagatcga
agtggcgtgagtgacgatgagcgcagtatttccgaacaacgaagtcccaccgatgatgaa
ttcgagggcgtgttgcaacgaaagcacgaatgggagagcacaacgaagaaggcgtctaat
cggtcctggcacaaagtgtacatggtcgttcgtggacagagcttgtttgtatataccgac
caaaaatcatacaaggcagcgcctgatcaaccgtacaagggagagtctcctctggacctt
agaggagcgactattactgtggcgagcgattacactaagaagaaacatgtcttccgagta
aagtcacaaagcggatcagacttcctattccaggctaaggatgatgctgaaatgaatgac
tgggttaccgtgttgaaccaagcagcacagggtacttcaggtgcgggtacgtctagggcg
cacactctacccgcgcctacacaagccgagaccaagcggcgtagtttcttcactctcaag
aaaaactaa
DBGET
integrated database retrieval system
