Bombus affinis (rusty patched bumble bee): 126920653
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Entry
126920653 CDS
T09368
Name
(RefSeq) protein sprint isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126920653
Membrane trafficking [BR:
baff04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
126920653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
SH2
RA
FERM_f0
Motif
Other DBs
NCBI-GeneID:
126920653
NCBI-ProteinID:
XP_050587279
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All DBs
Position
9:complement(12903889..13060262)
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AA seq
1418 aa
AA seq
DB search
MIVSCYKLEGESEERRSSTGNVLAWEHGRYDLIMEIENWWKKELLLNSLATDLDCMLSEL
CTTPNSYERSDVFLEPYLQQHGTVQVVSSPSTPPPNPLQHHQLTQLHHVQSEESLSSEGS
ATSGGSSSSTEDSGSEVACDITLIERLIRSHPIWFLPGIQRAGAFHLLQGKEEGNFVVRQ
SSQSDTMALSVRLPPGKGPYIEHYLIQANKGKLSLETSENRFDNIPSLIAHYSQCCDELP
VQLTLPRAMREAKNRQQLSSLALLGQEFWRYPMANPKPPESSSSNTSSLSSFRGGNNNLN
NNNNNIHTPTTESIVLNLAPISSHDTRSSSPTGALTTTTFASSLPRQPRPTPPNTLNLTT
FNEPLDLKKEKISPGDKLSQKLISPNLVQSVRCPSPVVHNVESNVLSPVQDTKVSFESKT
MAETSKSTMVELSRTRFSSVSTSMMNFHQNVSTFNNLSCTTSPVLPEIRNIIAENHSLGQ
NVKTPPPPPPRWAKPAIGPNQNNFSVTTTVTFNVNHSNDIGSSQNTPSDPNTSLLSPQSA
TSNKSLTSNFSVKSPLSPTTPILSPMSKLVPNTGAKTPNVLSPTTPSSTSKSKRRRDREA
RKNSQHYQESDILESYYRSSPGDKISDYEDIWNTTDQSNHSTWSPNDKLARNDGPANPQD
RLRNSNDRLMVPDRVANPNSERNFNERLPTSEQLIVRNDRMIVRNDKSIGNEKLSYKEMT
SPEFSSFKPAQEVKPVEQSNGSPEETGMGRRPDLLSRVSGSANSLNSPSTVTPPRNKLGL
MLAKSESNSPLTPESKQGSPFYAEPADAIAQNAAIIPRRRPRNNPATNKYRHSEPGWLQT
PVGANSNQLHPIDWEESEETEDKTPLISSSVDNLAKRLGTKETKKIPRAKPVQPPKIRTK
VFNDTSWAVDSSWEFIGNEGDDCDPDYDCDADYEGDNVARKFPDEECDRDVVGNTLTVQS
IILQRYPELLKPPDTSESLYSDRNSSYDNVEKRNEGEEAGDTRKDQTYDSSEWETPLETD
ESDVERMKRNKSFKERLDPLLSPPRLQALRNRENGGTGSTIRSYALQLAADKTTTFSQNI
DNFIQCTKEGKEASPHVVMRNMRQFMSGMKNYLVKHGEKEFEKEVEKERLKLKANEFLNL
DAILEGVMMNLVVKPLREHVYRLFVDHYATTGSLQTLAESIQHAQGKHIQDLGVRPKIIP
PSEPNLERILKCIDRLQKADSPLDKLENLLAAFSAIFNSVKHANSGRHLALGADDLLPLL
VWVLVRGRVVDAEVEAEYMWGLLHPSLLTGEGGYYLTTLSSAVHVLKTFKSSQGTMSTLN
GCGTPDCSSVLRILVPDELHGSLNTRTLPVRPNMNTREICRILAHKIRCTNPQDYGLFKL
VQGEETLLGDHECPQELSHCLFAYKRIDAKIAWPKTSS
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtaagttgttacaagttggaaggggaaagcgaggaaaggagatcgtcgacaggg
aacgtcttagcctgggaacacggacgctatgatctaatcatggagatcgagaactggtgg
aagaaagaattgctgcttaattccctggcgaccgatttggactgcatgctgagcgagctc
tgcacgaccccgaattcctacgagcggagcgatgtcttcctggaaccgtatctgcagcag
catggaaccgttcaggttgtcagctcgccgagcacgcctccgccaaatccgctgcagcat
catcagctcacgcagctacatcatgtacagagcgaggagtcgctttcctcggaagggtcg
gccacctcgggtggatcttcgagctcgacggaagattctggcagcgaggtcgcgtgcgac
atcactctgatcgagaggcttatacgctcgcatccgatttggttccttcctggcatccaa
agagccggcgctttccacttgttgcaaggcaaagaggaagggaacttcgtggtccgccag
tcaagtcagagcgacacgatggccctgtccgtgcggctgccaccaggaaagggaccgtac
atcgagcactacctgatccaagccaacaaggggaagctgagcttggagaccagcgagaac
aggttcgacaacatcccctcgctgatcgcccactattctcagtgttgtgacgaattgccg
gtccaattgacactgccaagggcgatgcgcgaggccaagaataggcagcagctctcctcc
ttggcgcttctgggtcaggaattctggagatacccgatggcgaatccgaaaccaccggag
agcagcagcagcaacacgtctagcttaagcagtttccggggtggtaacaataatttgaat
aacaacaataacaatattcatacgccgacgacggagagtatcgtgttgaatttggcgcca
atctcgtcgcatgatacccgaagctcgtcgcctacaggcgccttgacgacaaccacattc
gcgtcgtcgttgcctcgacagcctcgtccaacgccaccgaacaccttgaatttgacaacc
ttcaacgagcctttggacctgaagaaagagaagatctcgccaggcgacaaactgtcccag
aaattaatctcccctaatctggtgcagagcgttcgttgcccttcacctgtggttcacaac
gtggagagtaacgtgctgagtcctgtccaggacaccaaagtcagcttcgagtcgaaaacc
atggctgagacttcgaaatcgacgatggtcgaactgtccaggaccagattctcctctgtc
agcacttccatgatgaatttccaccaaaacgtgtcgacgttcaataatctatcctgcacc
acgtcccctgtactacctgagataagaaacatcatagcggagaatcattctctgggacag
aacgtgaaaacaccacctccgccgcctccgagatgggccaaacccgcgattggtccgaat
cagaataatttcagcgttactaccaccgtgacgttcaatgtcaatcactcgaatgatatc
ggtagctctcagaacaccccatcggaccccaacacttctctattgagcccacagagcgcc
acatcgaacaagtctctgacctcaaacttctccgtaaagtcacccttgtctccgacgacg
ccgatactttccccaatgtcaaaactagtcccaaacacaggcgccaagacgcccaacgtt
ctttcaccaaccacgccatcgagtacgagcaaatcgaaacgaagacgagatcgagaagct
cgaaagaactcgcaacactaccaagaatctgacattttggagtcgtactatcgaagttcg
cctggagacaagatttcggactacgaagatatttggaatactaccgatcaatcgaaccat
tccacctggtctcccaacgacaaactggccaggaatgatggaccagcgaaccctcaggac
cgactgaggaactcgaacgatcgactgatggttccagacagagttgcaaatccaaattcc
gagagaaatttcaacgaacgactgccaacgagcgagcagttgatagtgaggaacgacagg
atgatcgtgagaaacgataagtcgattggaaatgagaaattgagttacaaggagatgacc
agtcccgagtttagcagctttaagcctgctcaggaggtgaagcctgtggagcagagcaat
ggatcgccggaagaaacaggaatgggaaggagacctgatctgttatctcgagtctcaggt
agcgcgaattccttgaacagtcccagcacggtgacacctcccaggaacaaactaggatta
atgctggccaaatcagagagcaacagccccctgacaccagagtcgaagcagggtagtccg
ttttacgcggagccagcggacgctatcgcgcagaacgcggcgataataccaagaagacga
cctaggaacaacccagcaacgaataaatatcgacacagcgaaccagggtggctacaaacg
ccagtaggtgcaaattctaatcagctgcatccgatcgactgggaggaatcggaagaaacg
gaagataagacgcctttgatctcatcttccgtggataatctggccaaaagactcggcacc
aaagagacgaagaagattcctcgtgccaagccggtacaaccaccaaagatcaggaccaag
gtgttcaacgacacttcctgggccgtggactccagctgggaatttattggcaacgaagga
gacgactgcgatccggactacgactgtgatgcagattacgagggcgacaacgtggccaga
aagtttccggacgaggagtgcgacagggacgttgttgggaacactttgaccgttcagagt
atcatcctccaacggtacccagagctgttgaaaccgccagacacgtcggagtcgctttac
agcgacaggaactcctcgtacgacaacgtcgagaagaggaacgaaggagaggaggctgga
gacaccaggaaggaccaaacttatgactcttccgagtgggagacgccattggagacggac
gaaagcgacgtggagaggatgaagaggaacaagagcttcaaagaacgactggaccctctt
ctctctcctccgaggttgcaagccctcaggaatcgtgaaaacggaggcacaggctccacc
ataagatcgtacgccttgcagctagccgctgacaaaactaccaccttctctcagaatatc
gataatttcatccaatgcacgaaagaagggaaagaagccagtccgcacgtggttatgaga
aacatgagacagttcatgtctggaatgaaaaactatttggtgaaacacggcgagaaggag
ttcgagaaagaagtggagaaggaaagattgaagctgaaggcaaatgaatttttgaatctg
gacgccattttggagggcgtgatgatgaacctggtggtcaaaccgctcagggaacatgtt
tacagactgttcgtggatcattacgcgaccaccggttcgttgcaaaccctcgccgagagc
attcagcacgcccaagggaaacacattcaggatctcggcgttcgaccaaagatcataccc
ccatcggagcccaatttagaacgaatcctcaagtgcatcgatcgtcttcagaaggcggat
tcacctttggataagctggaaaaccttctcgcagctttttcggcaattttcaactctgta
aaacacgcaaattctggcagacacctggcgctgggtgccgacgacctccttcctcttctc
gtttgggtgttggttcgtggcagagttgtggacgctgaagtggaggctgagtatatgtgg
ggcttgcttcatccctctcttctcactggcgaagggggatattatctgacgaccttgtcc
agcgcagttcacgttttgaagacgttcaagtccagccagggaacgatgtccactttaaat
ggctgtggaacaccagactgttcatccgtactacgaatcttagtgccagatgaactgcat
ggatccctgaacaccagaacgttgcctgtgcgaccgaatatgaacacgagagagatctgt
cgcattcttgcacataagattagatgcaccaacccgcaggactatggtctgttcaaactg
gttcaaggggaagaaacgttactcggtgaccatgagtgtccgcaagaactctctcactgc
cttttcgcttacaagcggatcgacgcgaagatagcctggccgaagaccagttcttaa
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