Bombus affinis (rusty patched bumble bee): 126920658
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Entry
126920658 CDS
T09368
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04140
Autophagy - animal
baff04142
Lysosome biogenesis
baff04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
126920658
04140 Autophagy - animal
126920658
04148 Efferocytosis
126920658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126920658
Membrane trafficking [BR:
baff04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
126920658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
VPS18_solenoid_2nd
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Zn-C2H2_12
AP_endonuc_2
B129_C2H2-zf
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
126920658
NCBI-ProteinID:
XP_050587303
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Position
9:12360986..12365393
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AA seq
882 aa
AA seq
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MHDAYEETLILNISVQIESMAAYDDNLLIGTREGHLLMYNVPSVLDDNHKLELLRHSKNF
NKKRITQIDVVPEYNLLIILTDNIVCIHDLNSPNFQQLYQLQKTRGATLFALDIKPNQIV
NGENQTVVYLCVAVKRKLQLYNSRGKKFETFNGFELTVPDIPRELCWCGETLILGFRGLS
YTTLNLNGKTKELFPTGKSPEPSVTKLSDNSFVLGKDSQSFVMDTRGELIQHNPVKWSDT
PSALAWDDPYLLGIVHDRLEVYTIEGCLHIQTIKDLNKARLIYRCKQGKVFVASISHVWC
VRAVDVTHQIRTLLEQTQFQLAIKLTSLSDITEEEKHKQIYKIQTLYAHHLFRNKRFQEA
MDQFLKIGTDPYEVIMLFPDLVTPSSSNPEVSDPTLPKLQDHDLEKGLRALIIFLTEVRY
KLMGGNAKSKDKDNNEEKSVVNGKKNMTAVATEQLLKIIDTTLLKCYLQTTDALVAPLLR
LNHCHLAEAEKTLLMHQKYPELIILYQTKGQHRKALELLEKHAKENDSSLKGTARTIQYL
QQLGKDHMDLILKFAGWVLNEDPEQGLRIFMEDMQQVELLPRPKVLDYLLCHHKDLVITY
LEYVVHVWEDTNPLFHNVLIHQYKEKCLACMSENATPAEKQTAQHIRQKLQQFLEKSTHY
TPETILVHFPFDNLFEERAIILGRLGRHQQAISIYISLLNDIAKATEYCYNVYTRYQNQE
IVDKQKQSDGADEVYVMLIQQLLKPDDKGVLITGCIPEMQRTAEPDLEMALELLEKHASK
INPLKALELLPDTVPIGRIKYFLEVSLQEKLNTARRIQVLKGLLYAELLQVQEQRMHYES
QSVLMTEFNICPVCKKRFGNQSAFARYPNGDIVHYSCQDRKA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcttacgaagaaacgttaatattaaacatttctgttcaaatagaatctatg
gctgcgtacgatgacaatttactgattggaacaagagagggtcatcttcttatgtataat
gtaccatctgtattagatgacaaccacaaattagaattgttacgtcatagtaaaaacttc
aataaaaagcgtatcactcagatagatgttgtaccagaatataacttgcttataatttta
acagataatatagtatgtattcatgatttaaactctccaaactttcaacaactttatcaa
ttacaaaagactcgtggtgctacattatttgctttagatataaaaccaaatcaaattgta
aatggtgaaaatcaaacagttgtgtatttatgtgttgctgtgaaacgtaagctacaatta
tataattcaagaggaaaaaaatttgagacatttaatggtttcgaattaactgtgccagat
attccacgtgaattatgttggtgtggtgaaacattaattttgggttttcgtggattatca
tacacaactttgaatttaaatggaaaaaccaaagaattatttccaactggaaaatctcct
gaaccaagtgttacaaaattgtctgataattcctttgtactagggaaagattctcaatca
tttgttatggataccagaggagaactgattcaacataatccagtaaaatggtctgataca
ccaagtgcattagcttgggatgatccttatttacttggaattgttcatgacagattagaa
gtatatactatagagggttgtctgcatattcaaacaataaaagatctaaacaaagctagg
cttatatacagatgcaaacaagggaaagtttttgtagcatcaattagtcatgtttggtgt
gtgagagcagttgatgtaacgcatcaaattagaacattactagagcaaactcagtttcag
ttagcaataaaattaactagcttatccgatataacagaagaagaaaaacacaaacaaata
tataaaattcaaacactgtatgctcatcatctgtttcgtaacaaaagatttcaagaagca
atggatcagttcttaaaaataggaacagatccttatgaagtgataatgttatttcctgat
ttagttacaccatctagcagtaatcctgaagtcagtgatccaactttgcctaagctccaa
gaccatgatttagaaaaaggtctgcgtgcattaataatttttcttactgaagttagatat
aagttaatgggtggtaatgcaaaatccaaggataaagataacaatgaggaaaaatctgta
gtgaatggaaaaaagaatatgacagcagtagctacagaacaattattaaagattatagac
acaactctgttaaaatgttatctacagactactgatgcattggtagcaccattactcaga
ttaaatcattgtcatttagcagaagctgaaaaaactttattaatgcatcaaaaatatcct
gaacttattatattatatcagaccaagggacaacatagaaaagcattggagcttctggaa
aagcatgcaaaagagaatgattccagtctaaagggcactgcaagaacgatacaatatttg
cagcaacttggtaaagatcatatggatttaattttgaagtttgctggttgggttttgaat
gaagatccagaacaaggacttcgaattttcatggaagatatgcagcaagttgaactacta
ccaagaccaaaggtattggactatcttctatgtcatcacaaagatttagtgataacatat
ttggaatatgtagtacatgtttgggaagatactaatcctttgttccataatgttttaata
catcaatacaaagaaaaatgtttagcgtgtatgagtgaaaatgctacaccagccgaaaaa
caaacagctcaacatataagacaaaaattgcaacagtttttagaaaaatctacgcattat
actcctgaaacgatattagtacattttccatttgataatttgttcgaggagcgtgcaatt
attcttggaagacttggacgtcatcagcaagctatttcaatatatattagtcttcttaat
gatatagcaaaagcaactgagtattgttataacgtatatactagatatcaaaatcaagaa
attgtagataaacaaaaacaatctgatggagctgatgaagtctatgtaatgcttattcaa
caattgttgaaacccgacgataaaggagttttaatcacaggatgtatcccagaaatgcaa
agaacagcagagcctgatttggaaatggcacttgagctgcttgagaagcatgcatcaaag
ataaatccactaaaggcattagagcttctgcctgatacagttcctataggtagaatcaag
tactttttagaagttagtttgcaggaaaaattaaacactgcaagaaggatacaagtatta
aaaggattactttatgctgaactcttgcaagtacaagaacagcgtatgcattatgaatca
cagagcgttcttatgacggaatttaatatatgtccagtgtgtaaaaagagattcggcaat
cagagtgcgtttgcgaggtatccgaatggcgatattgtacattattcgtgtcaagatcgt
aaggcataa
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