Bombus affinis (rusty patched bumble bee): 126920757
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Entry
126920757 CDS
T09368
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04136
Autophagy - other
baff04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126920757
04136 Autophagy - other
126920757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126920757
03029 Mitochondrial biogenesis [BR:
baff03029
]
126920757
Membrane trafficking [BR:
baff04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
126920757
Others
Specific organelles associated proteins
Auto phagosome
126920757
Mitochondrial biogenesis [BR:
baff03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126920757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
ATG16
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF4
Tricorn_2nd
eIF2A
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_Vps41
Ge1_WD40
MYO6_lever
Cytochrom_D1
HbrB
Cluap1
DUF6935
Motif
Other DBs
NCBI-GeneID:
126920757
NCBI-ProteinID:
XP_050587465
LinkDB
All DBs
Position
9:complement(5228920..5836918)
Genome browser
AA seq
570 aa
AA seq
DB search
MAASESGVSSHSREDNNWRKDLILQLQERNKKQTYCFADLISLHNRLFESANTLRGENIQ
LTVANETLRREAASGTPGLSVNADLEARLLKQAEELATLHKRKGEHTQQIVDLNNKMQEM
LKELQIKEASVVESMELNANLRLEVSKCLSRERELESVNQMLKDEHQALQLAFASLEEKL
RKAQEENRQLIERLIKYKTRDAEKVNEENDNFLNESFSSPTAFLMQTISKFGKRQAKMQK
ELEDAARDTRPVSPDRSSLKEGISGLPTAVPTKVSVTFTAHDGEVYAVKWSPAERMLATG
GADRKVKLWNISKGMSESKGVLIGSNAGVMCVDFDSTGTLMLAASNDYASRVWTVNDFRL
KHTLTGHCGKVMAAKFLGEPSKVVTGSYDRTLKIWDLRSKACIETKFAGSSCNDLVTSDG
AGSTIISGHFDQRIRFWDTRAESSSNDILLEGKVTSLDLSRDANYLLSCVRDDTLKLIDL
RMKKIIGSFSADGFKVGFDWTRATFSPDGQYIAVGSSDGSVFIWSVTTNMIETVLKNHST
VVTAVSWHPHGAYLASVDKAKTVTVWGDHV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgagtgaatcaggtgtatcatcacattctagggaagataataattggaggaaa
gatctaattttacaattgcaagaaagaaacaagaaacaaacatattgttttgcagatctt
attagtttacataacagattgtttgaaagtgcaaacacattacgtggagaaaatatacaa
ttaaccgtagcaaatgaaactcttcgccgagaagcagctagtggaactcctggtttaagt
gtaaatgctgatcttgaagctcgtcttttaaagcaagcagaagaattagcaacattacat
aaaagaaaaggagaacatacacaacaaatagtagatcttaataacaaaatgcaggaaatg
ttgaaggagcttcaaatcaaggaagcgagtgtagtagaaagtatggagctcaatgccaac
ttacgtttagaagtatcaaaatgtcttagcagagaaagagagctagaaagtgttaatcaa
atgttaaaagatgagcatcaagccttgcaacttgcttttgcatctttagaagaaaaactt
agaaaagcgcaggaagaaaatcgccaattaatagaacgtttgattaagtacaaaacacga
gatgcagagaaagtgaacgaagaaaacgacaattttctgaatgagagtttttccagtccg
acagcctttttgatgcaaaccatatcaaaatttggaaaaaggcaagcaaagatgcagaaa
gagttggaagacgcggctcgtgacacacgacctgttagtcccgatagatccagtttaaaa
gaaggaatctctggtcttcctactgcggtcccaacaaaagtatccgtcacgtttactgca
cacgacggagaagtttatgccgtaaaatggtctcccgccgagaggatgcttgccaccggt
ggagctgacaggaaggtgaagctttggaatatctcaaaaggtatgtcagagagtaaagga
gtacttattggcagtaacgctggggtgatgtgcgtcgatttcgattctacgggaacgctg
atgcttgcagcgtcgaacgactacgccagccgggtgtggaccgtcaatgacttccggtta
aagcacactctaacgggccactgtgggaaggtgatggcggcgaagtttcttggcgagcct
tcaaaagtagttactggcagttacgatcgtaccctaaaaatttgggacctgcgtagcaaa
gcgtgtatagagacaaagtttgcgggttccagttgtaacgatcttgtaacttctgatggt
gctggttctactataattagtggccatttcgatcagagaattagattttgggacaccaga
gccgagtccagttcgaacgatattttattggaagggaaagtgacatcgctagatttatct
cgtgatgcaaattaccttctgagctgtgtcagagacgatacgttaaaactcattgattta
cgaatgaagaagatcattggatcatttagtgctgatgggtttaaagtcggctttgattgg
acgagagcaactttcagtccagatggccaatacatagcggttggttcttcggatggatct
gttttcatttggtcagtcactaccaatatgattgaaactgtgctgaaaaaccattcaact
gtggtgacagcagtttcttggcatccgcacggtgcctacctcgcatcggtggacaaagca
aaaacggtgacagtctggggcgaccatgtttaa
DBGET
integrated database retrieval system
