Bombus affinis (rusty patched bumble bee): 126920905
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Entry
126920905 CDS
T09368
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126920905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126920905
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126920905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
RHA1_ro05818_N
Motif
Other DBs
NCBI-GeneID:
126920905
NCBI-ProteinID:
XP_050587847
LinkDB
All DBs
Position
10
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AA seq
712 aa
AA seq
DB search
MTDDKTEFDWGNEKLQRAQKTVDESSYDLEAWSILIREAQNRPIVEVRPVFEKLVSVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLATYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVTFLKSVEAVGSYAENQKISAVRKVYQRGVVNPMINM
EQLWKDYMAFEQNINPIIADKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVD
IWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTPMEL
RSIGYMEVSSVGRSTVGALPRIPDPEEAIASLPRPDISQMIPYKPKVNPLPGEHPVPGGS
FPLPPAAAQLCTMLPPPGCFRGPFVAVDLLMDVFNRIQLPDHAPLPVADNGCDTKLFDLA
KSVHWIVDESNDGVSIGSKRRRTRLGDDSEEEDLPPPPANDIYRQRQQKRVK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgataaaacagaatttgattggggaaatgaaaaattacaacgtgctcaaaaa
acggtagatgaatcttcttatgatttggaagcatggagcatccttatcagagaagcgcaa
aacagacctattgtagaagtaaggccagtttttgaaaaacttgtgtccgtgtttccttct
gcaggccgatattggaaaatttatatagaacaagagatgaaaatgcgcaactttgaaaag
gtggaaaagcttttccaaagatgccttatgaaaatcttaaatattgagttgtggaaactt
tacctttcttacgtgaaagaaacaaaagccagtcttgcaacatacaaggagaaaatggca
caagcatatgactttgcactggataaaattggtatggatatccattcctatagtatatgg
aatgattacgttacattccttaaaagtgtggaagctgttggttcatatgctgagaaccag
aaaattagtgcagtgaggaaggtgtatcaacgaggtgtagttaatcctatgataaatatg
gagcaattatggaaagattatatggcttttgaacaaaatattaatccaataattgcggat
aaaatggctattgaacgttctagagactatatgaatgcaagacgagttgccaaagaatta
gaagctgtaacaagaggattgaatcgaagtgctcctagtgtacctccaactggtcatccg
gaagaagttaaacaggttgaattgtggaagaaatatattgcatgggaacgtagtaaccct
ttaagaactgaagatacttctttagttgcacgcagagtaatgtttgcaatagaacagtgt
ttattatgtttgggtcatcatcctgcagtgtggcatcaagctgcacactttttagaactt
agctcaaaaatattaacagagaaaggagatgtaaatgccgcaaagaatttaagcgatgaa
gcagcaacaatgtttgaaagagcaacaagtacattgttgtccaaaaatatgttattatac
tttgcgcatgcagattttgaagagggaagagtaaaatatgaaaaagttcatcaaatatat
caaaagttccttgatatacctgacattgaccccacactagcatatgtacaatacatgaaa
ttcgcaagacgcgctgaaggtataaaatcggctagaacggtttttaaaagagcgcgcgaa
gacccaagatgtaaacatcatgtatatgttgctgcagcattaatggaatattattgcaca
aaggacaaaaatattgcttttcggatatttgaattaggtttaaagaaatttggggacaat
cctgactatatactttgttatattgactacctgtcacatttgaatgaggacaataataca
agagttttattcgagagagttttatcatctggtagtttagaacctgaaaaatcagtcgat
atatggaaccgatttttagaatttgaatctaatattggagatctagcaagtattgtaaaa
gttgaaaaacgacgtagtgctgtattagaaaagatcaaagaattcgaaggtaaagaaaca
gcacaattagtagatagatataaattcttggatctatatccatgtactcctatggagtta
cggtccatcggatacatggaagtatccagcgttggaagaagtacagttggtgcattacca
cgaataccagatccagaggaagctatagcatcattgccaagacctgatatatcacaaatg
ataccttataaaccgaaagtaaatccattacctggagagcatccagtaccaggtggatct
tttccattgccaccagctgcagcacaactttgtaccatgcttcctccacctggatgcttc
agaggaccatttgtggctgttgatttactcatggatgttttcaatcgaattcagttacct
gaccatgctccattgccagtagcggataacggatgtgacacaaaattgtttgacctagcg
aaatccgtacattggatagttgacgaaagtaacgatggagttagtattggatctaaacgt
agaagaacgcgcttaggtgatgacagcgaagaagaagacttaccaccaccgcccgcaaat
gacatatatcgccaaagacaacaaaaacgagtcaagtaa
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