Bombus affinis (rusty patched bumble bee): 126920981
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Entry
126920981 CDS
T09368
Name
(RefSeq) nuclear pore complex protein Nup154
KO
K14312
nuclear pore complex protein Nup155
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126920981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126920981
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126920981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
WD40_WDHD1_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
126920981
NCBI-ProteinID:
XP_050588005
LinkDB
All DBs
Position
1:16406521..16413128
Genome browser
AA seq
1305 aa
AA seq
DB search
MTLTEMEPLKIHLDALEMAGKVVDIHITADSNFPSLINLMRYNVQGGPTVSGLDDHDYPN
LNGMSLCFPNINQMKAYSKISLPSEIMEHFHHMQCHCMMGLFTEISKAWLTIDSDIYVWS
YENESDVAYFDGLNETIISVGLVKPKAGVFQSYVKYLLILTTTVEITILGVTLTETSDGT
SPEMQLVPEPIFTVATDGIGITTIANTNSGRIFLGGRNGSLYEIYYQAESSWFGKRCKKI
NHSEGPLSFLVPSFVTIALSEEEAIIQISVDDSRNILYTLGDKGTITVWDIDNNGASKVA
SLSQASLVQNAVHVVKTLDSNNFRPLVSISAITESESVHLNLVVVAATGTRFYFSCTAVA
NPTTRPQGLQLIHVRLPPGYAANATVMRPRKVQMAHYRKGTLILVCGGDTETALCLSNDA
YPFTNYLAETQSPLSLDSPVWAMAEILVEPAICIEKQSITQEEPPLLVRQHMEAPRKFIF
LTSQGAIIYVQVRPMDILKQLLLEQRGPDTEAVRAYFQSQSLEQACATCLILATLESSQN
AELAEWATRAFFLYGSQRTTSIGPAIDVHGTNFANINTGDMRTSTPRVPNYDLRLQGFRP
HAPVGLNTDISLQQFSAKHNGLYLYVGRILRPIWNMRCIKQEVINNKTQISSTISTRQVS
WILSLLQALRSFLNKNTHITKQHGTTRITDGFETTIPSHYQEPIVEERNSLAALKIFITH
ACEVLELWKILCENHLNNIVNCLSKDQINQFSTATFRDLILIGHEISSLLIIHLIDSYLG
DNASVDAVSQRLREVCPNLYRSEDAVCSKANEIILKAKSCTNPEEKECYLQSALKLCKEV
APRLNLSAVCQQFIACQFYSGVLELCLCCAERVDPNNAALHYYKNNEPIEDQEGRFAYMK
RLEIYKEFTTLLDHLYNQSISNPLTPTIPSKPGPPQQNGSTMPVTPAKEILHDIITDALH
SKCEILHASVYAWMIERRLHGELVALAAPSLEAYLTRVNAPDLLWQFYEKNKNHAAAAKI
LDALATKESNVTLSQRVEYLARAVVCMRSDQAGYAPYLGIFLRELEDKVEVARIQQQILD
TICNQHLSGRLSDEASRALKFSLLDITKLYQEYADPLQLWECKLSIIHCSGHQDAMLIQE
IWTNIINNELKDTSTAEDKMTILMSKIISLGQEYSGSPHCFPVDFLVKQLEIKACKLNVS
NNGIISGFLQLGVSMEDLLDIYKMIGKDTRTWFNEGNDFHLIESTANLVNYFISHSNITN
TFVKRKIITKCQDVISKCLTTLYSKPHGQELITKLRSIQNVLTRM
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcactgaaatggaaccgcttaaaatacacttagatgccttagaaatggcaggg
aaagtggttgatatacacattacagctgatagcaactttccatccttaattaatcttatg
agatataacgtacaaggtggaccaactgttagtggtcttgatgatcatgattatccaaat
ttaaatgggatgtcattatgttttcctaatataaatcaaatgaaagcatacagtaaaatt
tctttgccatctgagataatggaacattttcatcatatgcaatgtcattgtatgatgggt
ctttttacagaaatttcaaaagcatggcttacaattgatagtgatatatatgtttggtca
tatgaaaatgagtctgatgttgcatattttgatgggttaaatgaaactattataagtgta
ggtttagtaaaacccaaagcaggggtgttccaatcttatgtaaaatatttgttgattctt
acaactacagtggaaataactattcttggagttacattaacagaaaccagtgatggcact
tcaccagaaatgcaactagttcctgaaccaattttcacagttgctacggatgggattggc
attacaacaatagctaacactaatagtgggagaattttccttggtggtagaaatggatcc
ctttatgaaatatattatcaggcagaaagtagctggtttgggaaacgttgtaaaaagata
aatcattctgaaggtccattatcatttttagttccatcatttgtcactatagctttatca
gaagaagaagcaataatacaaatttccgttgatgattcacgaaatattttatacacactc
ggtgataagggaacaattacagtttgggatatcgataataatggagcgtccaaagtcgcg
tctttgtcacaagcttctttagtacaaaacgctgttcatgttgttaaaacactggatagt
aataattttcgaccattggtgagcatatcagctattacagagtcagaatcagtacattta
aacttagttgtagttgcagctactggaacacgcttttacttcagttgcactgcagttgct
aatccgacaacaagacctcaaggtctacagttaatacatgttagattgccaccaggttac
gctgctaatgctacagtaatgaggcccaggaaagtacaaatggcacattataggaaagga
acattaattcttgtttgcggtggagatacagaaactgctttatgtttaagtaatgatgct
tatccattcacaaattatttagctgaaactcaaagtcctttatctctcgatagtcccgta
tgggcaatggcagaaattcttgtggaaccagctatatgtattgaaaaacaaagtattaca
caagaagaacctcctcttctcgtaaggcagcacatggaagcgccacgaaaatttatattt
ttgacttctcagggtgccattatttatgttcaagttcgtccaatggatatcttaaagcag
cttctattagaacaacgcggtcctgatacagaagccgttcgcgcatattttcagtcgcaa
tcattggaacaagcatgtgcaacttgtcttattttagccacgcttgaaagttctcaaaat
gctgagttagcagaatgggcaacaagagcattctttttatatggtagtcaacgaacgaca
agcattggacctgcaattgatgtacatggtactaactttgctaatataaatacaggagat
atgcgcacatcaacaccgagagttccaaactatgatttaaggcttcaaggatttcgacct
catgcaccagttggacttaatacagacatttctctgcaacaattttctgcaaaacacaat
ggtttatatctgtatgtaggaagaatacttcgaccaatatggaatatgcgttgtattaaa
caagaagttataaacaacaaaactcagatctctagtacaatttcaacaagacaagttagc
tggattctaagtcttctgcaggcattaagatcgtttctcaataaaaatacccacattact
aagcaacacggtactactagaataactgatggatttgaaacaactatacctagtcattac
caagaaccaatagtcgaagaaaggaattctttagctgcattaaaaattttcattactcat
gcttgtgaagtgttagaactttggaaaattttatgtgaaaaccatttaaataatattgta
aattgtttatcaaaggatcaaattaatcaattttctacagctacatttcgagatttaatt
ttaattggacatgaaatttcttcattattgatcattcatcttatagatagttatcttgga
gataatgcatctgttgatgctgttagtcaaagattacgagaagtttgtccaaatttatat
agaagcgaggatgctgtttgttctaaggctaatgaaataattttgaaagcaaaaagttgt
acaaatccagaagagaaagaatgctatttgcaatctgctttaaagctttgcaaagaagtt
gctcccagactaaatttaagtgcagtatgccaacaatttatcgcttgtcaattttattcg
ggtgtactcgagttatgtctctgttgtgcagaaagagtagaccccaataacgctgcctta
cattattataaaaataatgaaccaatcgaagatcaagaaggaaggtttgcttacatgaaa
agattagagatttataaagaattcactacgttattggatcatctttataatcaaagcatt
tctaatccattgacacctactatacccagtaaacctggtcctccacaacaaaatggctca
actatgcctgttacaccagcaaaagaaatattgcatgacatcataactgacgcattacat
tctaagtgtgaaattctccacgcttcagtatatgcttggatgatagaaagaaggcttcac
ggagaactcgttgctctagcagcaccttctttagaagcttatctcacccgagtcaatgca
ccagacttgctgtggcaattttatgaaaaaaataaaaatcatgctgctgcagctaaaata
ttggatgctttagcaaccaaagaatcaaatgtaacattatcacagagagttgaatattta
gctcgagcagtagtttgtatgagaagtgaccaagctggatacgctccataccttggcatt
tttttacgtgaattagaagacaaagtagaagttgctagaatacaacaacagatattagat
acaatttgtaaccaacatttaagcggtagactcagcgatgaagcatctagagcattaaag
ttttcgttacttgatataacaaagttataccaagaatatgcggaccctttacaattatgg
gagtgcaaattatctataattcattgttctggtcatcaagatgcaatgttaatccaggaa
atttggactaatattataaataatgaattaaaagatacgtcaacagcagaagataaaatg
actattttaatgagcaaaattatatccttgggacaggagtattcaggatcaccacactgt
tttccagttgattttctagtaaaacagttagaaataaaagcatgtaagttaaatgtatca
aataatggaattatatctgggtttctacagttaggagtatcaatggaggatctcttagat
atttacaaaatgattggcaaagatactcgaacttggttcaacgagggaaatgattttcat
cttatcgaatcaactgcaaatttagttaattactttatatctcattcgaacattaccaat
actttcgttaaacgaaaaataataacgaagtgccaagacgtaatttcaaagtgtttaact
acattgtatagcaagcctcatggacaagaattaataacgaaacttagatcgattcaaaat
gttttaactcgtatgtaa
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