| Entry |
|
| Name |
(RefSeq) DEAD-box helicase Dbp80
|
| KO |
|
| Organism |
baff Bombus affinis (rusty patched bumble bee)
|
| Pathway |
|
| Brite |
KEGG Orthology (KO) [BR:baff00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126921106
03015 mRNA surveillance pathway
126921106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:baff03019]
126921106
Enzymes [BR:baff01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126921106
Messenger RNA biogenesis [BR:baff03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126921106
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
10:complement(7318083..7321705)
|
| AA seq |
475 aa
MASTEVEWTKFVDEQEKLSAKVSNLNIDKESKESTANTDSKNDDSSDDQISAAEKSLFQK
IIRKGLVETTQDIEVQRRDPSSPLYSVKSFEALHLKPALLKGVYAMGFNAPSKIQETALP
TLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDTTKNCPQVLCLSPTYELAIQTGEVAAK
MSAFCNEIKIKYAVRGEEISRGSKITEHIIIGTPGKVLDWAIKFKFFNLNKISVFVLDEA
DVMIATQGHQDQCIRIHKQLPRTCQMMFFSATYEPEVMKFAEIIVNNPLIIRLLKKEESL
DNIKQYYVKCKDLDEKYAAITNIYGVITIGQAIIFCHTRKTAGWLAEKMTKDGHAVAVLS
GELTVEQRISVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPVDQNRQADCETYL
HRIGRAGRFGKSGIAINLIDSSHAMQICKDIEEHFGRKIHYLDAEDADEIEKIGA |
| NT seq |
1428 nt +upstreamnt +downstreamnt
atggcttcgactgaagttgaatggactaaattcgtagacgaacaagaaaaactatcagca
aaggtgtctaatctaaatatagataaggaatctaaagaaagtacagcaaatacagattcc
aaaaatgatgatagttcggatgaccaaatctcagccgcagaaaaatcattattccaaaaa
attatacgtaaaggtttggtagaaacaacacaagatatagaagttcaaagaagagatcca
tcttcacctttatatagtgttaaatctttcgaagctcttcaccttaaacctgctttatta
aaaggagtatatgcaatgggatttaatgctccatcaaaaattcaagaaactgcattacct
actttacttgctgatccaccacaaaatatgattgctcagtcacaatctgggacaggtaaa
acagcagcatttgtattagcaatgctaagcagagtcgacaccaccaaaaattgtcctcaa
gtgctttgcttatcaccaacttatgaattagctatacaaacaggagaagtagcagcaaaa
atgtctgcattctgtaatgaaataaaaataaaatatgctgtaagaggagaagaaataagt
cgtggatcaaagattacagaacacataatcattggaacaccaggaaaagttttagattgg
gctattaaatttaagttctttaatttaaataaaatatcagtttttgttttagatgaagca
gatgtaatgatagcaacacaaggtcatcaagaccagtgtattcgtattcataagcagctt
ccacgcacatgtcaaatgatgtttttctctgcaacttatgagccagaagtgatgaaattt
gcagaaattatagttaataatcctttaataataaggttactgaaaaaagaggaaagttta
gataatattaaacaatattatgtaaaatgcaaggatctggatgaaaaatatgcagctatt
accaacatatatggtgtaataacaataggacaggcaattatcttttgtcatactagaaaa
acagcgggttggttagccgaaaaaatgacaaaagacggtcatgcagtagctgttttatct
ggggaactgacagttgaacagagaatttcagttttggatcgttttagagctggtcttgaa
aaagttcttatcacaactaatgttttagccagaggtattgacgttgaacaagtaacaata
gttgtcaattttgatttaccagtggatcaaaatcggcaagcagactgtgaaacatatttg
catagaattggtcgtgctggacgttttggtaaatccggaattgctattaatctaatagat
tcgtctcatgcaatgcaaatatgtaaggatatagaagaacattttggaagaaaaatacat
taccttgatgcagaagatgcagatgaaatagaaaaaataggagcctag |