Bombus affinis (rusty patched bumble bee): 126921234
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Entry
126921234 CDS
T09368
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
baff01009
]
126921234
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126921234
03041 Spliceosome [BR:
baff03041
]
126921234
Protein phosphatases and associated proteins [BR:
baff01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126921234
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126921234
Spliceosome [BR:
baff03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
126921234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_Nup35
PWI
RRM_1
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
126921234
NCBI-ProteinID:
XP_050588565
LinkDB
All DBs
Position
10:11139019..11144200
Genome browser
AA seq
960 aa
AA seq
DB search
MIIENPDQFKAWLTAVLEPLCDADPAALAKYVYALVKKDKTLEELRGGMVEQLDVFLQQE
TKNFVELLFKTLETQEYVLPPPKNDPDGGGTPPGVNPPPPALTTDKVTESTIAITSMNTN
PPAPLQMNGSAPMAIGKRETRKSDSDKVDKEKEKRSRSRSGRMRSRTRSRSRSWERDRRR
SRSREHIRRDRERDRSRPWRNESPPNTRRHDRRRSRSRSTSPIRPRIRDGPDNRDHRARF
RNRSPTPLRSRSRSRSLDRKKIDRTERMEVDRTERIDGSPGGGTPTQDSNHGDVDMRLST
TSQSIQSVVAVASSVPNNQPGFQAKRRCRDFDEKGYCMRGDLCPYDHGTDPVVLEDVALS
RVLTFGPHSAQAPGTVPVTAVPEPPPGPNGNAPPQHLPLASLPPPHLRNQHHSDMDAFAE
YNPDAPSMEPRMPWGRHPQPGPGIYGRGRRELISVPVIPHTNSSEIPHTQTNPLKRKQAF
DFNRLGPKQRVVHNPANCSLELKKVPRSLNNITQLNNHFSKFGKIVNIQVNFGGDPEGAL
VTFQLPTEAKAAYRSTEAVLNNRFIKVFWHNNVNNNAAGGAIENVPPGCRPSVKERLGAA
VTAPAKTEENEYIPTRRSTEEQVSQTLVPTSPKTTTVPTREDKVLAIKKTQEILAAKETL
KKKQEEKRKEALKLTADLRKRKQELLDKHLIEIRALIDKAEKNPEQKDAIMATIKTMQQS
IDNLRKDLAANGQIGGNKTQIKSREQTQKEILDAELDLMTAQQEGQDAGELQKRLNELRA
QAAALGLNAGPTAGRGTRSSRVIRGSHALSYRGRGRGSFAHVSVDHRPTSLLVSGYETEE
KAEVLAHFQQFGEIVNQIVDDATPSIVINFKSRKEAEIALVKGRTFQDRLLSITWVSGHH
LHRGGGGTNANASVQLSSRSEQAPPPTDEDIDLEGNAEALLLEENEEEEDEDGESRSWRR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgataatagagaatccggatcaattcaaggcgtggctcactgccgtcttggagccactt
tgtgatgcagatcctgctgcattagcaaaatatgtatatgctctcgttaagaaggacaaa
acactagaagagttgcgaggtggaatggttgaacagcttgatgtatttttgcagcaggaa
acaaagaattttgtggaattgttatttaaaacattagagactcaagaatatgtacttccg
cctccaaaaaatgatccagatggtggtgggacaccaccaggtgtaaatccaccaccacca
gcattaactacagataaagtaactgaaagtacaattgcaattacttctatgaatacaaat
ccccctgctccacttcaaatgaatggatctgcacctatggcaataggtaaacgtgaaact
agaaaatcagattctgataaagttgacaaagagaaggaaaaacgttctaggagtcgaagc
ggtcggatgaggtcccgaacaaggtctcgttcgcgctcatgggagagagatagacgtaga
tcaagaagcagggaacacattcgtcgtgatcgagaacgcgacagaagtcggccatggaga
aacgaatcgccaccaaatacacgacgacatgacagaagacggagcagaagtcgtagcaca
tcaccaatacgcccaagaatacgagatggtcctgataatcgtgatcatagagcacgattt
agaaatcgatctccgacaccacttcgctctagatcccgatcaagatcattagatcgtaaa
aagatagatcgcactgaaaggatggaagtagatagaacagaaagaattgacgggagtcct
ggcggaggtactccaacacaggatagcaatcatggtgatgtagacatgaggttgtcgact
actagtcaatcaattcaaagcgtcgttgccgtcgcttctagtgttccaaataaccagcca
ggttttcaagccaagaggaggtgcagggattttgatgaaaaaggttactgtatgagaggt
gatctgtgtccctatgatcatggtacagatcctgttgtattagaagatgtagctctaagt
cgtgttctgacctttggcccacatagtgctcaagcaccaggaacagtacctgtaacagca
gtaccagaaccacccccaggacctaatggaaatgctccaccacaacacctccctctcgca
agtttacctcctccacatttaaggaatcaacatcattctgatatggatgcttttgcggaa
tacaatccagatgcaccaagtatggagccacgaatgccatggggtagacatcctcaacct
gggcctggaatttatgggaggggtcgacgggaactgatcagtgtgccagtaattccacat
acaaactcatctgagataccacatactcaaacaaatccgttaaaacgtaaacaagcattc
gattttaatcgtcttggaccaaaacaacgagtggtacataatccagctaattgttctctg
gaattaaaaaaagttccacgtagcctgaacaacataacccagttgaataatcatttttca
aaatttggtaaaattgtaaatatccaagttaatttcggcggagatcctgagggagcgttg
gttaccttccagctaccaactgaagcaaaggctgcatacagaagtacggaggctgtgttg
aataatagatttatcaaagttttttggcataacaatgttaacaacaatgcagctggtggt
gctattgagaacgtaccaccaggatgccgtccttctgtcaaagaacgattaggtgctgct
gtaactgcaccagcaaaaactgaagaaaatgaatatattcccactcgtcgttcaaccgaa
gaacaagtctcacagactttggttccaacatcgccaaaaaccaccactgttcctacgcga
gaagacaaagttcttgcaataaaaaagacacaagaaatattagccgctaaggaaacgtta
aagaaaaaacaggaagagaaacgtaaagaagcattaaaattaactgctgatttgcgtaaa
agaaaacaagaattattagataagcatttaatagaaattcgagctttgattgacaaagct
gaaaagaatccagaacaaaaagatgcaattatggcaacaatcaaaacgatgcaacaatct
attgataatttacgtaaagacttggctgcgaacggccaaattggtggtaacaaaacgcaa
atcaaatctagagaacaaacccaaaaagagatcttagacgcagaattagatttaatgacc
gcgcaacaggaaggacaagatgctggagaattgcaaaagagattaaatgaattgcgagca
caagctgctgcattaggtttaaatgcaggaccaactgctggtcgaggtacaagatctagt
agagtcatacgaggtagtcatgcattatcatataggggacgcggcagaggaagctttgcc
catgtttcagtagatcatagacctacgagtcttctagtctctggttacgaaaccgaagaa
aaggctgaagttttagcacattttcaacaatttggagaaatagtgaatcaaatagtagat
gacgcaacgccttcgattgtaatcaattttaaatcaaggaaagaagctgagatagcttta
gtaaaaggacgcacatttcaggatagattattgtctataacttgggtctctggacatcat
ctacatcgtggcggtggtggtacgaatgcaaatgcatctgtacaactttcttcgcgttct
gagcaagcaccaccacccaccgatgaagatattgacttagaaggtaacgctgaggcatta
cttctcgaagaaaacgaagaagaagaagacgaagatggtgagtcgcgaagctggcggcga
tag
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