Bombus affinis (rusty patched bumble bee): 126921515
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Entry
126921515 CDS
T09368
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03008
Ribosome biogenesis in eukaryotes
baff03013
Nucleocytoplasmic transport
baff03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126921515
03015 mRNA surveillance pathway
126921515
03008 Ribosome biogenesis in eukaryotes
126921515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126921515
03009 Ribosome biogenesis [BR:
baff03009
]
126921515
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126921515
mRNA cycle factors
Stress granule specific factors
126921515
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
126921515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
LRR_4
UBA_8
NTF2
LRR_6
LRR_8
UBA_4
Motif
Other DBs
NCBI-GeneID:
126921515
NCBI-ProteinID:
XP_050589143
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All DBs
Position
10:complement(4965015..4967388)
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AA seq
537 aa
AA seq
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MTNAEVVKNMSDWEPLRLTYTKPSFNTQESTLAARQDLWHKFILFGIGQYKATEVLRTVI
VACEPEIILPIMYKEESPNKSTFLTKCSCSAVENLVKQGLCITLSNGQELRIDIILGYTD
SQSLQLNPNRIIAQALYYRYEPTKKVLNLDDFENEKSLNSIYCPISLPKILHFVLRCTKM
GILSNNRDSRLPVRELTLRYNQITGIVFFEKFFNYHLTKLDLRHNQITDVEYLRYFSEFK
ISELWLDGNPLCAKYSKCQDYVQAVKNVFPHLQKLDGIVIGMEQKFVPNIQSNFLRDGTS
TCLIKQFVKHFFTLYDQDDRQVMNGLYDRDALYSMTLGSVSNYIHKQLTKTFVTNRNLLK
FVDYAKCQEFLLRGPEKIISALRNQPPTIHHFKTFYIDLLYEGEIHIAISVQGMFSFRDI
HQCPPMFFNRTFMIMKKEDNEYCITNDQCYLDGTPANGTLSGNSEIRFESKGAPKFIPTV
FSVSEKEQLLTFLHELTTMNMKFCHQYLEDANWDIRTAIVTFMNMYTVNNVPPEAFL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgcagaagttgttaaaaatatgtcagactgggaaccattgcgactgacatat
actaaaccatcatttaatactcaagaatcaactttggcagcacgacaagatttatggcac
aaattcattttatttggcataggacaatataaagcaacagaagtgttgagaactgttatt
gttgcttgtgaacctgaaattatattacccattatgtataaagaggaaagtcccaacaaa
agtacattcctgacaaaatgtagctgcagcgctgttgaaaatcttgtaaagcaaggttta
tgcataacattgtcaaatggacaagaattacgtattgatattatattgggatatacagat
tctcaaagtttacaattgaatcctaatagaattatagcacaggcactttattataggtat
gaacctacaaaaaaggtattgaaccttgatgattttgaaaatgaaaagtcattaaactct
atatattgtcccatatctttacctaaaatattacactttgttttaagatgtactaaaatg
ggtattttaagcaataatcgtgattcacggttacctgttagagaattgactttaagatat
aatcaaattacaggcattgtcttttttgaaaaattttttaattatcatttaaccaaatta
gacttacgtcataatcaaatcacagatgtggaatacttacgctattttagtgagtttaaa
ataagtgaactttggttggatgggaatccactgtgtgcaaaatacagcaagtgtcaagat
tatgtgcaagcagtaaaaaatgtttttcctcatttacaaaaattggatggaattgtaata
ggtatggaacaaaagtttgttcctaatattcaaagtaactttctaagagatggtacaagt
acttgtttgatcaaacaatttgtgaagcattttttcacattatatgaccaagatgataga
caagtgatgaatggtttatatgacagagatgcactttattctatgactctgggatctgtt
tcaaattacattcataaacagctaactaagacgtttgttacaaatagaaatttactaaaa
tttgttgattatgcaaagtgccaagaatttttattacgtggaccagaaaaaatcatttct
gcgctcagaaatcaaccgcctacgatacatcactttaaaacattttatatagatttattg
tatgaaggagagattcatattgcaatttctgtgcaaggaatgttctcatttcgagacatt
caccaatgtcctccaatgtttttcaatagaacttttatgattatgaaaaaagaagataat
gaatattgcattactaatgatcagtgttatcttgatggaacacctgctaatggcacttta
tcgggaaacagtgaaataaggtttgaatcaaaaggtgctccaaaatttattccaacagtg
tttagtgtttctgaaaaagaacaattacttacatttttacatgaattaactacaatgaat
atgaaattttgtcaccaatatcttgaagatgccaactgggatattagaactgctattgtg
acatttatgaatatgtatacagtcaacaatgtgccacctgaagcttttctataa
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