Bombus affinis (rusty patched bumble bee): 126921688
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Entry
126921688 CDS
T09368
Name
(RefSeq) ubiquitin conjugation factor E4 A
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126921688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126921688
Enzymes [BR:
baff01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126921688
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
U-box type E3
126921688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
126921688
NCBI-ProteinID:
XP_050589401
LinkDB
All DBs
Position
1:complement(12820325..12825290)
Genome browser
AA seq
1041 aa
AA seq
DB search
MCDNVNNNPFAGLFSTINDAVSFSSQSQAIINESNRASHVAQLEDENFDDIAGIQSLEDS
RDFRTDHQINHLLGDILGITLHELEANEYQERRLVFVNVDSVEQAVFDRLMLPDLESNLV
PIDNSQQIFTDPHTTEKRVLIYLFESYCRLQLYQDEPELSDSLFRITQVILQNATIALEE
PELFEEQEIYNQFIALCVDETGPKSEFVSFVNGIVCELLNENEEDAMDIIAMSFSPILDI
IYKEAAQSNLVLYRQYWFNVLNLFSSIEPLAKLLIDHSTPKSNQGRAYADTLLGAIFSLS
CLPKTIEEPFYFFEKPLQQTSVEGNIWTALDALNESLQKVFHLLLKCSAEVRHLTLQWIG
NCLHLNANRGKIWNTQNDVTFNSMLCVSDGFMLNLGNVLLRLCQPFCIKQNDPKVPKIDP
TYCAADVNDQDNCINSNIHLKGMSSETCLIPMSEGGARPVAKTFGFTTECFFLTHRALDL
GYRVVLDKLLRTNQDLVRIQRVYQDAQNGGRSEVFDIITQRMEAEMTKYLSLRASLLVPE
MLKLLAKFHATTAFWLVQVYLNDVQIGENEENYIPKECKEVKFPLPGTVPDTLRCIPEFV
VENTIRFLYLLRRINPNIFEEQGPSFLMPVLTEIIVLMESQQRLYNPHLRARLAEGLEAL
LPTSDETMSPVTPSLGSFHREQLFITHPYRQYIVPNLLKVFVSIEMTGQSVQFEQKFNYR
RPMYVAMEYLWKLPEHRNNFISLAEEAEANMETAQPPLFLRFINLLMNDAVFLLDEALSS
MAQLKQLIQARESGEWNKLPQHERDQQAHYLLHLGMIARFDNILGRKTIYTLKMLTTEIK
SIFCHPTMVDRIVSMLNYLLLQLVGPNKNNLKVNGQKEYAFQPANLVLNICEIYINLSHS
ESFTLAVSQDGRSYSPELFKLADNVLVRIGGVGILGDLDQFARNVEAAASHKKEEDEILI
DAPDEFLDPIMSTLMTDPVVLPSSKITIDRQTIARHLLSDQTDPFNRSPLTMDMVKSNVE
LQRRVQEWIQQKKQEKTRNYH
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgacaatgtgaataacaatccatttgctgggttgttttcaactatcaacgatgcc
gtgtcattctcttctcaaagtcaggcaattatcaacgaaagtaatagagctagtcatgtt
gcgcaacttgaagatgaaaattttgacgatattgcgggaatccaaagtttggaggattcc
agagattttagaaccgatcatcagattaaccaccttcttggtgatatacttggaataaca
ttacacgaattagaagcaaatgaatatcaagaacgaagattagttttcgttaatgttgat
tcagtcgaacaagcagtttttgaccgattaatgttacctgatcttgaatctaacttagta
cctatagacaattctcaacaaatttttaccgatcctcatacaacagaaaaacgagtatta
atttatttgtttgagagttattgtcggttgcaactgtatcaagacgaaccagaattatct
gattccctttttagaataactcaggttatattacaaaatgcaactatcgcgctagaagag
ccagaattgtttgaagaacaagagatttataatcagtttattgcattatgtgtggatgaa
actgggcccaaatcagaatttgtatcatttgtcaatggtattgtgtgtgagttactaaat
gaaaatgaagaagatgctatggatataatagctatgtcttttagtcctattcttgatata
atttacaaagaagcagcacaaagtaatcttgtcctttatcgtcaatattggtttaatgta
ttaaatcttttttcctcgatagaacccttagctaaattattaattgatcatagtactcct
aaaagcaatcaaggccgagcatatgcagatacattattaggtgcaatttttagcttgagc
tgtttaccaaaaacaatagaagaaccattttatttttttgagaagccattacaacagact
tcagttgaaggaaatatttggacagccttagatgcattaaatgaatcattgcaaaaggtt
tttcatttactattaaaatgttcggcagaagttcgtcatttgactttacaatggataggc
aattgtcttcatttaaatgcaaatagaggaaaaatttggaatacccagaatgatgtgacc
ttcaactcaatgttatgtgtttctgacggttttatgttaaatttaggaaatgtgctattg
cgtctttgtcaaccattttgcattaaacaaaatgatcctaaagtgcctaaaattgatcca
acatattgtgctgcagatgttaatgatcaggataactgtataaattcaaatatacattta
aaaggaatgtcttcagaaacttgtttgataccaatgtcagaaggtggtgccagaccagtt
gcaaaaacatttggttttactactgaatgctttttcttaactcatagagcattagatctt
ggatatagagtagtgttagacaaacttttaagaacaaaccaggatttggtaagaatacag
agagtatatcaggatgcacagaatggtggtagatcggaagtatttgatataataactcaa
cgcatggaagcagaaatgaccaagtatttatctttaagagcaagccttttagtaccagag
atgctaaaactattagcaaaatttcatgcaacaacagcattttggttagtacaagtatat
ttaaatgatgtacagattggagaaaatgaagaaaattacattccaaaggaatgtaaagag
gtgaagttccctttaccaggaactgttccagatactttgagatgcattccggaatttgtg
gtagaaaatactattagatttttgtatttattacgacgcataaatccaaatatttttgaa
gaacaagggccatcctttctaatgcctgtattaacagagatcatagtattaatggagtct
caacaacgtttatataatcctcatctacgtgcacgtctagcagaaggcttagaggcactt
ttacctacaagcgatgaaactatgagccctgtaacaccaagcttagggtcattccataga
gaacaattatttatcacacatccatatagacaatatattgttccgaatttacttaaagta
tttgtgagcattgaaatgactggacaaagtgtacaatttgaacaaaagtttaattatcgg
cgaccaatgtatgttgctatggagtacttgtggaaattaccagaacatcgtaataatttc
atttctttagcagaagaagcagaagccaatatggaaacagctcagcctccattatttttg
cgttttataaatcttttaatgaatgatgcagttttcttattagatgaagcactttcaagt
atggctcaattgaaacaattgattcaagcaagggaaagtggagaatggaacaaactacca
caacatgaacgtgatcaacaagctcattatctcttacatcttggaatgattgcacgattt
gacaatatattaggtagaaaaactatatacacattaaaaatgttaactacagaaataaaa
tccatcttttgtcatccaacaatggtggatcgtattgtctcgatgcttaattatttgttg
cttcagctggttgggccaaataaaaacaatttaaaggttaatggacagaaagagtatgcg
ttccaaccagcaaatttagtattaaatatatgcgaaatttatataaatcttagtcatagt
gaatcttttacgcttgctgtttcacaagatggtcgttcatatagcccggaactgttcaaa
ctggctgataacgttcttgttcgtatcggtggtgtgggtatattaggcgatttagatcaa
tttgcaagaaatgttgaggcagccgcaagtcataaaaaggaggaagacgaaattttaatc
gatgctcccgatgagtttctagatccaattatgtctactttaatgacagatcctgttgtt
cttccatcatcaaagataactatagatcggcaaaccattgcaaggcacttattaagcgac
cagactgacccgttcaatagatctcctcttactatggatatggtaaaatcaaatgttgaa
cttcaacgtagagtacaagaatggatacaacaaaagaagcaagaaaaaacgagaaattac
cattga
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