Bombus affinis (rusty patched bumble bee): 126921724
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Entry
126921724 CDS
T09368
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126921724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126921724
03016 Transfer RNA biogenesis [BR:
baff03016
]
126921724
Enzymes [BR:
baff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
126921724
Messenger RNA biogenesis [BR:
baff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
126921724
Transfer RNA biogenesis [BR:
baff03016
]
Prokaryotic type
tRNA degradation factors
126921724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
Fasciclin
Motif
Other DBs
NCBI-GeneID:
126921724
NCBI-ProteinID:
XP_050589479
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All DBs
Position
11:5838976..5843126
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AA seq
770 aa
AA seq
DB search
MALFRHSKLLNIRNLSFLRLKSHNKNENTFQVKFISSNAVENIDIKLSNGSEITLSSGKY
ARFTSGSVTAKLGDTSVMTTVVRKNEPCNDSVIPLTVNYRQKASAIGRIPTNFLRREIGF
TDHEILVSRLIDRSVRPLFQPEYCYETQIVCNLLATDGINNPDILCINAASAALSISDIP
WMGPVAAVRVGLIDDKYIINPTKRDLQTSKLNLVLSSMSKNLIVMIEGSADDILEPELRK
AIKIGAKECQIIIQSIQKLQNRVGKPKLQINKDSGLNNDVEEFVKNFAEHEIRKIFSCHS
HDKISRDTAIFDLRDRMLKSITDRSTDFIKNAAEAFNKISKENFRSLIFETNIRCDGRGT
DDLRDIKCQVDLFQPLHGSAFFQRGQTQVLCTITLDSIESSLKLDNISMLSSGIKEKNFF
LHYEFPPYAVNEIGKVAGYNRREIGHGALAERGLRAVIPKDYPFAIRLISEVLESNGSSS
MASICGGSLALMDAGVPISSHVAGVAMGLICNPHATELKDNDYKILTDISGIEDHLGDMD
FKIAGTKKGFTALQADIKIAGVPLKVIMKAIENSNAAKSQIINIMNSVLSIPASNKKENK
PILDTIEVPIHQRGKFLGIGGSNIKKILYETGVTIQLQGDTTFSIFAPNQNAMNEAKEMI
DAIIQKDVEPILTFGNIYTATITEIRETGVMVTLYSSMVPTLLPNSQLDQRKIHHPDVLG
LNVGDEIKVKYFGRDPVNGRVRLSRKVLQGPIIFEKDFNIIKKTLDAYKT
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtttaggcatagtaagttattaaacattagaaatttaagttttttacgtttg
aaaagtcataacaagaatgaaaatacatttcaagttaaatttatatcgagcaatgctgta
gaaaacatagatataaagttatctaatggatcagaaattacactatcaagtgggaaatat
gcacgatttacatctggaagtgttactgctaaacttggcgatacatcagtcatgactact
gtggttaggaaaaatgaaccatgcaatgattctgtaattccattaactgtgaactacaga
caaaaagcttctgcaattggacgtataccaacaaattttcttcgtagagaaataggtttc
acagatcatgagatccttgttagcagattaatagatagatctgtacgtcctttgtttcag
ccagaatactgctatgaaacacaaatagtatgtaatttattagctactgatggaattaat
aatccagatatattatgcattaatgctgcctctgcagctttaagtatttcggatattcca
tggatgggacctgtagcagccgtaagagttggtttaattgacgataaatatataattaat
cctacgaaacgtgatcttcagacaagtaaattaaatcttgtactgtcatctatgtccaaa
aatttaattgtcatgatagaaggatcggcagatgatattttagagccagaacttcgaaaa
gcaataaaaataggtgctaaagaatgtcaaataattatacaatctatacaaaaattacaa
aatcgtgttggcaaacctaaattacaaattaacaaagacagtggattaaacaatgatgtg
gaagagtttgtaaaaaattttgcagagcatgaaatacgtaaaatttttagttgtcattct
cacgacaaaatttcgcgagacactgctatttttgatcttagagataggatgttaaaaagt
ataacagatcgtagtacagattttattaaaaatgctgcagaagcttttaataaaatttct
aaggaaaattttagatctttaatatttgaaacaaatataagatgtgacggtcgtggaaca
gatgacttgagagatataaaatgccaggttgatttatttcagcctcttcatggctcagcc
ttctttcaacgaggacaaactcaagttttatgcacaataactcttgacagtatagaaagt
tctcttaaattggataatatctcaatgctatctagtggtataaaagagaaaaattttttt
ctgcattacgaatttccgccgtatgctgtaaacgaaataggtaaagttgctggatataat
cgtagagaaattggtcatggagcattagcagagagaggattgcgagcggttataccaaaa
gattatccatttgctataagactaataagcgaagtattagaatctaatggctcgtcttct
atggcttctatttgtggtggtagtctagcattaatggatgcaggtgtgccaatatcatct
catgttgctggtgtagctatgggactaatatgtaatcctcatgctactgagttaaaggat
aacgattacaaaattttaactgatatatcaggtatcgaagatcatcttggagacatggat
tttaaaattgcgggtacaaaaaaaggatttacagctttacaagctgatataaaaatagcg
ggagtccctttaaaagtgataatgaaagctatcgaaaactcaaatgcggctaaaagtcaa
attattaatatcatgaattcagtattatctattccagcaagtaacaagaaagaaaataaa
cctatacttgataccatagaagtacccattcatcaaaggggaaaatttcttggaatcgga
ggctcgaacataaaaaaaattttatatgaaactggagttactatacaattgcaaggcgat
acaacgttttctatatttgcacctaatcaaaatgcaatgaatgaagccaaagaaatgata
gatgcaattatacaaaaagacgtggaaccaatattgacatttggtaacatctatactgca
acaataactgaaattcgtgagactggggtcatggttacattgtattcctctatggtacca
acgttattacctaattcgcagttagatcaacgtaaaattcatcatcctgacgtactagga
ttgaatgtcggagatgaaataaaagtaaaatattttggacgagatccggtgaatgggcgc
gttagattatctcgaaaagtgttgcaaggcccaattatttttgaaaaagactttaatatt
attaaaaagactttggatgcatataaaacataa
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