Bombus affinis (rusty patched bumble bee): 126921726
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Entry
126921726 CDS
T09368
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126921726
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
baff04812
]
126921726
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
126921726
Membrane trafficking [BR:
baff04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
126921726
Cytoskeleton proteins [BR:
baff04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
126921726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
MIT
RuvB_N
TIP49
AAA_22
AAA_5
AAA_16
NPHP3_N
Mg_chelatase
IstB_IS21
RNA_helicase
Phage_TTP_13
DUF815
nSTAND3
Motif
Other DBs
NCBI-GeneID:
126921726
NCBI-ProteinID:
XP_050589483
LinkDB
All DBs
Position
11:complement(5431947..5439288)
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AA seq
716 aa
AA seq
DB search
MSYSDGGRPIRKYGTKSPKKLCVTKNENSDKTTTTINCNNHHHNHYHHNHRFLDTPQPSV
HKRNLYIVSFPLILLFNVLRTLLYQLFVVFKYLYTSTSQLIQRRQTCKQTCQLEIVVGQK
SSENLNNNLNNTGQTENEGMSQVPRRQVGPGPGDPLLAKQKHHHRRAFEFISKALKIDED
NEGQKEMAIELYKKGIGELEKGIAIECNGGRGEVWEHAQRLHDKMRTNLAMAKDRLDFLV
SVCELKKLDICNEYRAPGNKMDNEHPGKNLRVRRNIHTLQTTRSSLNTNHTKNTNSTQTV
NIGQNTCTQIPKLRPRSPKNYSAHSEASGRKLSVPGKRVGTVISKSQTLPRSMGRSTPVQ
SCHRVTPIKPSSTPPSVKRQLSVPGNGSPVRRPGTPTTSNSNRGTPTRKVPLLKGVDPKL
AQVILDEILEGGAAVHWEDIAGQETAKQALQEIVILPSLRPELFTGLRTPARGLLLFGPP
GNGKTLLARAVATQCNATFFSISAASLTSKYVGEGEKLVRALFAIARELQPSVIFVDEVD
SLLSERRDNEHEASRRLKTEFLVEFDGLPCNPEERVLVMAATNRPQELDEAALRRFTKRV
YVTLPDLRTRIMLLKRLLAKHNDPLTPEELNEMAVLTQGYSGSDLTGLAKDAALGPIREL
NPDQVKELDLNSVRNITMQDFRDSLKRIRRSVSPASLAAYEKWSFEYGDQEDCICI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagtgatggcgggcgtccaattcggaaatacggcacaaagtcgccgaaaaag
ttatgcgtgacgaagaatgaaaatagtgataaaacaacaacaaccattaactgcaataat
catcaccataatcattaccatcataatcatcgctttctcgacacccctcagccgtcagta
cacaaacgtaatctctatattgtttcttttcctttgatactgctgttcaatgttctgagg
acacttctttatcagttatttgtggtatttaagtacttatatacatctacatctcagttg
attcaacgaagacaaacttgcaaacagacctgccagctagagatcgtagttggtcaaaag
tctagtgaaaatttaaataataatttaaataatactgggcaaactgagaacgagggaatg
tcgcaagtgcctagaaggcaggttggtcctggccctggagacccattacttgcaaaacaa
aaacatcatcatcgtagagcttttgaatttattagtaaagcacttaagattgacgaagat
aatgaaggccagaaagaaatggcaattgaactttataagaagggaattggagaattagaa
aaaggaatagctatagagtgtaatggtggtcgaggagaagtatgggaacatgcacaaaga
cttcatgataaaatgcgcactaatttggcaatggcaaaggatagacttgattttcttgtg
agtgtgtgtgagctgaaaaaactggatatctgcaatgaatatcgtgctcctggaaataaa
atggacaacgaacatccaggaaagaatctgagggtccgacgcaatatacacacattacaa
acaactcgatcttctttaaatacaaatcatactaaaaacacaaacagtacacaaacagtg
aacatagggcagaatacatgtacccaaattcccaagttaaggccacgttcaccaaaaaac
tattctgcccattctgaagcatctggaagaaaattatctgttcctggaaaaagagtgggg
acagttataagcaaaagtcaaacattaccacgcagcatgggacgctcaacaccagtacaa
tcttgtcatagagttacacctattaaaccatcatctacgccaccttctgtaaaaagacaa
ttatcagtacctggaaatggttcacctgttaggagaccaggaacaccaactacatcaaac
agtaatagaggaacacctacaagaaaagtacctcttttaaaaggtgtagatccaaaactt
gcacaagtaattttagatgagattttagaaggaggtgcagcagtacattgggaggatatt
gctggtcaagaaactgcaaagcaagcattacaagagatagtcatcttgccttcattaaga
ccagaattatttactggcttacgaacaccagcaagaggattattattatttggtccacca
ggaaatggaaagacattgcttgcacgtgctgtggctactcagtgcaatgctacatttttt
tcaatatctgctgctagtcttacatcgaaatatgttggagaaggagaaaagctagtacga
gctctttttgctatagcgcgagaattacagccatctgtgatctttgttgacgaagtggat
tcgttattaagcgaacgtagagataatgaacatgaagcttcacggcgattgaagacggaa
tttttagttgaatttgatggtttgccatgtaatccagaagaaagagtattagttatggct
gctacaaatagacctcaagaattggatgaagctgcattaaggagatttacaaagcgagta
tatgttacgttgccagatttacgaacaagaattatgttactgaagcgacttttagctaaa
cataatgatcctctaacaccagaagagctaaatgagatggcagttttaacccagggctat
tctggaagcgatttaacgggtttagcaaaagatgcagcacttggccctattagagaactt
aatccagatcaagtaaaggaattggaccttaattccgtacgtaatattacaatgcaagat
tttcgtgattcgcttaaaagaattcgtagatcagtgtcacctgcaagtttagcagcttat
gaaaagtggagcttcgaatatggtgaccaggaagactgtatttgcatatga
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