Bombus affinis (rusty patched bumble bee): 126922007
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Entry
126922007 CDS
T09368
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126922007
Membrane trafficking [BR:
baff04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
126922007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
DUF5050
EGF_CA
SGL
EGF_3
hEGF
PLDc_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
126922007
NCBI-ProteinID:
XP_050590101
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All DBs
Position
11:complement(11834035..11897951)
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AA seq
933 aa
AA seq
DB search
MGRSCRLLVLSPLYLLTIFGFLAAADAFSTDNKPCPLRQFQCTNGRCIPIPWVCDSMDDC
GDNSDETSKCEGQHKCTDSEFKCTNGKCIPGTWHCDGEDDCYDGSDEDPTVCRSKQCSET
EFECSPGRCIPKTWLCDLQHDCSDGLDEKNCRRTKNCTADQFTCHSGNGECVALAWMCDG
HPDCSDGSDEAECNDTCRSDEFTCANKRCIQRTWVCDSDDDCGDGSDEEDCKPVTCGPSE
FACSKNYCITSRWRCDGDFDCPDKIDEVGCKYSNGERPSHCNKDEDFDCDDDFTCIHKSW
VCDGERDCPNGADELPKRCHNVTCRPDQFQCGDHRNCISGHLYCNGKAECVDGSDERNCT
GKTTVCDPSTQFECSEGSCIPLSSVCNKNRDCIGWEDENEELCGVNECSKNNGGCSQICI
DLPIGFRCDCNAGYRLIDNRTCDDIDECLEPGSCSQFCLNEKSSFKCSCAPGYLKDPRNH
TRCKAAEGHASLLFTRRHDIRKVALDRLEMTNIVKDTKMAAALDFVFRTGMIFWSDSSEK
KIYKAPIDEGNERTVVIDDGLTTSDGLAVDWIYSHIYWTDSKKSTIELANFEGNMRKTLI
RDRVQEPRAIALNPLEGWMFWTDWSDEARIEKAGMDGSHRTVIVDNDVQWPNGLTLDLIG
KKIYWVDAKLNIIGSCNYDGSGVRTVLYSPEVLRHPFSITTFEDYVYWTDWDKEAIFKAN
KFTGQSVEAVTSLRTLKYPMVVHVYHPYRQPDGMNQCQAVNGHCSHLCLPAPRINSKSPL
LSCACPDGLKLLPDGLMCVEKVSTTVAPTTQEISKPFKRLEPLNVTTTVHSTHSTDGDGK
GGLASESTDPGLVAGIVIGVASLGLLLLALVAVLCYRHYLHRNVTSMNFDNPVYRKTTED
QFSLEKNRFPLPTATVGEEAQEPLTSPGTNDYV
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaagctgtcgtctgcttgtactttcgccgctgtatttgctgactatattcggc
tttctcgcagcggctgatgctttctccactgacaacaagccttgtcctttaaggcaattt
caatgtacgaatggtagatgtataccaatcccgtgggtctgcgactcgatggacgactgc
ggtgacaattccgatgaaaccagcaaatgcgaaggtcagcacaagtgcaccgactcggag
ttcaagtgcaccaacggaaagtgcatacccggaacctggcactgcgacggcgaggatgac
tgttacgatggctctgacgaggatccgactgtctgcaggtcgaaacagtgcagcgaaacg
gagttcgagtgcagccctgggaggtgcataccgaaaacctggctgtgtgatcttcagcac
gactgcagcgacgggttggacgagaaaaattgccgcaggacgaagaattgtacggcggat
cagttcacgtgtcactcggggaacggcgagtgcgtggcactcgcgtggatgtgcgacggc
catccagactgttcggacggttcggacgaggctgagtgcaacgacacttgtcgatctgac
gagtttacgtgcgcaaacaagcgatgtatccagagaacgtgggtgtgcgacagcgacgac
gattgtggagacggcagcgacgaggaagattgcaaaccggtcacctgtggtccgtcagaa
ttcgcctgctccaagaattattgcataacgtctcgatggagatgcgacggtgatttcgat
tgcccagataaaatcgacgaagttggatgtaagtattcgaacggcgaacgaccaagccac
tgcaacaaggacgaagacttcgactgtgacgacgatttcacgtgcatacacaaaagctgg
gtgtgcgacggtgaaagagactgccccaacggggccgacgagttgccaaaacggtgtcac
aacgttacatgcaggccggatcaattccaatgcggggatcatcgtaattgtatatcaggc
cacttgtattgcaacggtaaagcagaatgcgtagatggcagcgacgagagaaattgcacg
ggcaaaaccaccgtttgtgatccgtcgacgcaattcgaatgtagcgagggctcgtgtatc
cctctttccagcgtgtgcaacaaaaaccgtgattgtatcggttgggaggacgagaacgaa
gaactttgtggcgtgaacgagtgttccaagaacaacggtggatgttcgcaaatttgcatc
gatctgccgatcggcttccggtgtgattgtaacgcgggatacaggctcattgacaatagg
acttgcgatgatatagacgagtgcttggaaccaggcagctgttcccagttctgtttgaac
gaaaagagcagtttcaagtgcagctgtgccccgggttaccttaaagatcccaggaaccat
actcgttgcaaggcggcagaaggtcacgccagcctgctctttaccagaaggcacgatata
agaaaagtggcattggatcgtttggagatgacgaatatagtgaaagacacgaaaatggcc
gcggccttggatttcgtttttcgcaccggtatgatcttctggagcgacagcagcgaaaag
aagatctataaagctccgatagacgaaggcaacgagcgtacagttgtaattgacgatggt
ttaacaacatcggatggacttgccgttgattggatatatagtcatatttattggaccgat
tccaagaagagtaccatagaactggctaatttcgagggtaatatgaggaagacgttgatt
cgagatcgggtacaagaacctagagcgatagctttgaacccactggaggggtggatgttt
tggaccgattggagcgacgaagcccgcatagagaaagcgggaatggatggatctcatcga
acggtgatagtcgacaatgacgtacagtggccaaatgggttgactctggatttaattggc
aagaaaatatactgggtagacgcaaagttaaatataattggatcgtgtaattacgatggt
tcaggtgtacgaacggttctctattctccggaagtattgaggcatcccttcagtattacg
acgttcgaagactacgtttattggaccgactgggacaaggaggcgatatttaaagcaaat
aaatttactggtcaatcggtcgaagctgttacatctcttcgaactctgaaatatccaatg
gtcgttcacgtatatcatccgtacagacaaccagacggaatgaatcaatgtcaggctgtg
aatggtcattgcagtcatttgtgtttaccagcaccaagaattaattcgaaatcgcctctt
cttagttgcgcttgtccggacggcctaaaattgttacctgacggtttgatgtgcgtggaa
aaagtaagtacaactgtagcacctacaacgcaagaaattagtaaaccattcaagagactc
gaacctctcaacgtaaccacgactgtccattcaacgcattcaacagatggagatggcaaa
ggtggtctagcgtctgaatccacagaccctggtttagtcgctgggatagtgataggcgtg
gcgtccttagggctgttactcctcgcattagtagcagtattatgctataggcattacctt
catcgtaatgtaacgagtatgaactttgataatcctgtgtataggaaaaccacagaagat
caatttagtctcgaaaagaataggtttccactccccactgctacggttggagaagaggct
caggaacctttaacgagtcctggaactaatgattacgtttaa
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