Bombus affinis (rusty patched bumble bee): 126922134
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Entry
126922134 CDS
T09368
Name
(RefSeq) FACT complex subunit Ssrp1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126922134
03036 Chromosome and associated proteins [BR:
baff03036
]
126922134
Transcription factors [BR:
baff03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
126922134
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
126922134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
SSRP1_C
GRAM
Motif
Other DBs
NCBI-GeneID:
126922134
NCBI-ProteinID:
XP_050590374
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Position
11:complement(12171005..12195588)
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AA seq
735 aa
AA seq
DB search
MDFLEYTDVIAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFIGTWG
LRIFLKNGTLHRFRGFKEGDQEKIAKFFLQNYKKDMLEKELSLKGWNWGTARFNGSVLSF
DVGHHTAFEIPLYDVSQCNTGKNEVTLEFHQNDDAPVSLMEMRFHIPISDSVDQDPVEAF
HQQVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLR
LFLLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFSEKELKEKYEDK
LPKELSGPTYEVLGKVMKVIINRKLTGPGNFISHSGTLAISCSFKAAAGYLYPLERGFIY
VHKPPIHIRFEEIASVNFARGGGSTRSFDFEIELTSGVVHTFSSIEKEEYGKLFDFITSK
KLRVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAQERDAEENQDSEEESTDEDFN
PNQDESDVAEEYDSNPNSSESENESDASGKSQKKEKKEKKEKKPKSAKTVSEKPRKPRKQ
KKEKDANKPKRPPTAFMIWLNSARERIKAENPGIAVTEIAKKGGEMWRELKDKSEWEQKA
AKAKKEYTASMKEYEASGGGGDKEKISEKKEKGEKKKKESKKESPSKLMTGTSFKSKEYI
SDDESSSDEDNKKLEKKASDEDSDGGKEKKSGDKRSAEDDDKKLKKKRKEESEGSDEEPI
ESTPPSSEAESKDSD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggattttttagaatatactgatgtgattgcagaagttaaaggagctatgactcctggg
cgattgaagcttacagaccaacatttgatttttaaaaatcaaaagacaggcaaagtagaa
caaatttcagcgtctgatatggaaatggtaaattatcaaaaattcattggtacctggggt
cttcgaatatttctcaaaaatggaactctacataggtttcgtggattcaaggaaggtgat
caagaaaaaattgcaaaattctttttacaaaactataagaaagatatgctagaaaaggaa
cttagcctaaaaggttggaattggggtacagctaggtttaatggttctgtattaagtttt
gatgttggtcatcatactgcttttgaaattccattgtacgatgtgtctcaatgtaacact
ggtaagaatgaagtcacattggaatttcatcagaatgatgatgctcctgtgagtttaatg
gaaatgagatttcatatccctattagtgacagcgtagatcaagatccagtagaagcgttt
catcagcaagttatggaaaaagcatctgtcatcagtgtcagtggagatgctattgcaata
tttcgggagattcaatgtcttacaccacgtggtcgttatgatataaagatattccaatca
tttttccaattacatggtaaaacttttgattacaagattccaatgtcaactgttttaagg
ctatttcttttaccacataaggacaacaggcaaatgtattttgtggtcagtttagaccca
ccaattaaacagggtcaaacccgttatcattatttagtattattattcaatcaagaagaa
gaaacttcaattgaattacctttttctgaaaaagaattaaaagaaaaatatgaggataaa
ttaccaaaagaattatctgggccaacttatgaagttttaggaaaagtaatgaaagttatt
attaatagaaaacttactggacctggaaatttcattagtcattctggaacgcttgcaatc
agttgttcatttaaagcagctgcaggttatttatatcctttagaaagaggatttatttac
gttcataaaccaccaatccatatacgttttgaagagattgcgtcagtaaatttcgcccgt
ggtggtggttctacaagatcatttgattttgaaattgaactgactagcggtgttgttcat
acattcagtagtatagaaaaggaagagtatggaaaactttttgactttattacttccaaa
aaattacgggttaaaaatagaggcaagagtgataaattgaattatgacaatgactttgga
gatagcgatcaagaagatgagccagatgcgtatttggcaagagttaaagcagaagcgcag
gaaagagatgcagaggagaatcaggattctgaggaagagtctacagatgaagattttaat
ccgaatcaggacgagagtgatgtggcagaagaatatgatagtaatccaaatagttcagaa
agtgaaaatgaatcagatgcttcaggaaaaagtcaaaagaaagagaagaaagaaaaaaaa
gaaaagaaaccaaagtcagctaaaaccgtgtcagagaagccaagaaaacctagaaaacag
aagaaagaaaaagacgcaaataaacctaagagaccgccaactgcatttatgatatggtta
aacagtgctcgtgaaagaattaaagcagaaaatcctggaattgctgttacagaaattgca
aagaaaggaggtgaaatgtggagggaactaaaagataaatctgaatgggaacaaaaagca
gcaaaggcaaagaaagagtacactgcatcaatgaaagaatatgaagctagtggcggaggt
ggcgataaggaaaagatatcagaaaagaaagaaaagggagagaagaagaagaaagagagt
aaaaaagagtctcccagtaagcttatgaccggaaccagtttcaaaagtaaagaatatatt
agcgatgatgaaagcagtagcgatgaagataataagaaattagaaaagaaggcttcggat
gaagacagcgacggaggtaaagaaaagaaaagcggagataaacggagtgcggaggatgac
gacaaaaagttgaagaagaaaaggaaagaagaatcggagggtagtgatgaagaacctatt
gaaagtactccaccttctagcgaggctgaatctaaagacagcgattaa
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