Bombus affinis (rusty patched bumble bee): 126922228
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Entry
126922228 CDS
T09368
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin A
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04120
Ubiquitin mediated proteolysis
baff04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126922228
04120 Ubiquitin mediated proteolysis
126922228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126922228
Enzymes [BR:
baff01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126922228
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126922228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-RING-like
zf-HC5HC2H
zf-RING_Vps41
Endonuclease_7
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
126922228
NCBI-ProteinID:
XP_050590592
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Position
11:complement(11153727..11157180)
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AA seq
601 aa
AA seq
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MREAGIMLISTALTCAVIGNAYYQRKQFYPTVVHITKSNPSMTVIYTQGLILVFMINAFF
RKIFFGTLRAAELEHLLEKVWYAVTETCLAFTVFRDDFSPKFIALFTLLLFLKSFHWLAE
DRVDYMERSPVITWLFHLRVGTLLALLFAINLTMIHYAYNTTATKGPSVQLVFGFEYAIL
LTVVFNISVKYILHTIDLQSENPWDNKPVFLLYTELIIGLLKVILYVAFVTLMVKLYTLP
LFALRAMYYTMRDFRKAFHDIVMSRRAIRNMNTLYPDATTEELAAADNVCIICREEMVSA
SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNILRPVNNNQGNRQQNQAQAGPQVPQAPQA
PGFNPIVQVLPAFWAGMQAAGAPAALQQQQQQPQQQQVSNATTQQQQAQNSGPNTPSTSF
QNLAASGVPLFPPPFPTMVPLPPIPTPPPNLTELSEEELRAMEGNLRQAVEARIQTLQRI
QLLLDAASAMMNQYQTAAVTANIPVPTATNNTNVTTDISSMAKQGTSKTACPELNSEQPQ
DNAEMNVPTANSPNDNVNTLSGINGNDVAPESSIRNDTESSSEQEMLRRRRLQKFSAHKC
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagagaggctggaataatgttaataagcacagcattaacatgtgctgtgataggcaac
gcgtattatcaaagaaaacagttttatccaacagtagttcacataaccaaatccaaccct
agtatgacggtaatctatacacaaggattgattctagtatttatgataaatgctttcttt
cgaaagatattttttggtaccctacgtgctgctgaacttgagcatttgttggaaaaagta
tggtatgcagtaactgaaacttgtctagcatttacagtatttagagatgactttagtcca
aaattcatagcactattcacacttcttttatttttgaaatcatttcactggttggcagaa
gatcgtgtagattatatggaaagaagtcctgtaataacttggttattccatcttagagtt
ggtactctattggcattactgtttgctataaatttaaccatgattcattatgcttataat
acaacagcaacaaaaggtccctcagtgcaacttgtttttggttttgaatatgccattctc
ttaactgttgtattcaatattagtgtgaagtatatattacatacaatagatctacaaagt
gaaaatccatgggacaataaaccagtatttttattgtacacagaattaataattgggctg
ttgaaggttattttatatgttgcttttgtcactttgatggtcaaattatatactttacct
ttgtttgcacttcgtgcaatgtattatacaatgagagactttaggaaagcattccacgat
attgtaatgtcgcgtcgagctatcagaaatatgaatacattatatccagatgctacgaca
gaagaattagctgctgctgataatgtatgcattatatgcagggaagaaatggtgtctgca
agtaaaaagttaccatgtaatcatatttttcatactgcctgccttcgttcttggttccaa
cgtcaacaaacgtgtcccacatgccgtttaaatatcttaagacctgttaataacaatcaa
ggaaataggcaacaaaatcaagcacaagcaggaccacaagtgcctcaagctccacaagca
ccaggatttaatccaattgttcaagtcctcccagcattttgggctgggatgcaagctgca
ggggcaccagcagctttacaacaacagcaacaacagccacaacagcaacaagtttcaaat
gcgacaacacagcaacaacaagctcaaaatagtgggccaaatactccatcaacctcattt
caaaatttggcagctagtggtgtaccgttgtttcctccaccattcccaactatggtaccg
ttgcctcctattcctacgccaccgccgaaccttacagaattaagtgaagaagaacttaga
gcaatggaaggtaatttacgacaagccgttgaagctagaatacaaacgttgcaaagaatt
cagcttctattagatgctgccagtgctatgatgaatcaatatcaaacagcagctgttact
gctaatattccagtgccaactgcaacaaataacacgaatgttacaacagatatttcttca
atggcaaaacaaggaacatctaaaactgcatgtcctgaacttaacagtgagcaaccacaa
gataacgctgagatgaatgttcctactgcaaattctcctaatgataatgtaaatacgtta
tcaggcataaacggtaatgatgtagctccagaatcatcaattaggaatgacacggaatct
tcaagtgaacaagaaatgctacgaagacgtaggctacaaaaattttcagctcataaatgt
tcgtaa
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