Bombus affinis (rusty patched bumble bee): 126922229
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Entry
126922229 CDS
T09368
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03030
DNA replication
baff03420
Nucleotide excision repair
baff03430
Mismatch repair
baff03440
Homologous recombination
baff03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126922229
03420 Nucleotide excision repair
126922229
03430 Mismatch repair
126922229
03440 Homologous recombination
126922229
03460 Fanconi anemia pathway
126922229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126922229
03032 DNA replication proteins [BR:
baff03032
]
126922229
03400 DNA repair and recombination proteins [BR:
baff03400
]
126922229
Transcription factors [BR:
baff03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126922229
DNA replication proteins [BR:
baff03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
126922229
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
126922229
MMR (mismatch excision repair)
126922229
DSBR (double strand breaks repair)
HR (homologous recombination)
126922229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
IBR
POT1
Motif
Other DBs
NCBI-GeneID:
126922229
NCBI-ProteinID:
XP_050590596
LinkDB
All DBs
Position
11:11113971..11117648
Genome browser
AA seq
600 aa
AA seq
DB search
MYSLTEGALDKIMNGIEVDRPILQILGHKKLSSSNSGERYRLLVSDGKRINSFTMLATQL
NSMITDNVLTEFSICQINRYAISVVNNAGKQKRVMVILSVDLKVAGDEVGHKIGNPTNAD
ADGESKPAQSVQSAQTTSQQQIFYYSGSLVSKHSGQQSSTSDISTIPIVALSPYQNRWVI
KARVVNKSAIRTWSNSRGEGKLFSMDLVDESGEIRCTAFRDQCDKFYDMIEIGKVYYISR
ATLKTANKQFNNLKNDYEMSLTGDSEIIPCHDIGDKIPTLQFDFIPINDIEQKEKNDIID
VLAIVKSRGDLQMLVSRTTGKDMKKRDINLIDESNTMVTLTLWGTQAEEFSGNDNPVLAI
KGARVGEFNGGKNLSTLSGTAVQIDPDIPEAHRLRGWFNTTGCHEEAKPLSRAFGSAAQM
SQALITIGEANSQIDKKIGPEIFTVKATINLLRTENILYKSCPSENCKKKVIDQANGMYR
CEKCNKEFPNFKYRLLGSLSLADWTDNMWVTAFNDETEKILGITAQELGELKENDNDAYL
EKLGDVTFKSFIFKIRTKMETFGDENRLRSTCIDVSPTDCKAYNEDLITKLKELTGIDSI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtattcacttacggaaggagcattggataaaatcatgaacgggatcgaggtcgatagg
ccgatattgcaaatattgggtcacaagaaattatctagttcaaatagtggagaacgttac
agacttctcgtatctgatggaaaacgaataaattcatttacgatgcttgccacgcaatta
aattcaatgataaccgataatgtattaacagaattttccatttgccaaataaatagatat
gctataagcgtggtaaataatgctggcaaacaaaaacgagtaatggtgatattaagtgtt
gatttaaaagttgcgggtgatgaagttggacataaaattggtaatcccacaaatgctgat
gctgatggtgaatctaaaccagcacaaagtgtacagtctgcgcaaactacttcacaacag
caaatattttactattcaggtagcttggtgtcaaagcatagtggtcaacagtcttctacc
agtgatatatccacaatcccaatcgttgcattgagtccttatcaaaacaggtgggtaata
aaggcacgagttgtcaataaatctgccattagaacgtggagtaattcacgtggtgaagga
aaattgttttccatggatcttgtagacgaaagtggagagattagatgcactgcatttaga
gatcagtgtgataaattctatgatatgattgagatcgggaaggtttattacatttccaga
gcaactttaaaaacagcaaataagcagtttaataatttaaaaaacgattatgaaatgtct
ctaactggcgattcagaaataattccatgccatgatattggggataagattccaactctt
cagtttgattttataccaataaacgatatagagcaaaaggagaaaaatgatataatagat
gttttggctattgtaaaatctcgtggtgatttgcagatgttagtatcacgaactactggt
aaagacatgaaaaaaagggatattaatctcattgatgaaagtaatactatggtaacgctt
acactatggggaacacaagctgaagaattttcaggaaatgataatccagttttagccatt
aaaggagctcgtgttggcgaatttaatggtggaaagaatttgtctactctcagtggaact
gctgtgcagattgatccagatattccagaagcacatagattacgaggttggtttaacaca
actggatgtcatgaagaagcaaagccactttcaagagcatttggaagtgcagctcaaatg
tctcaggcattgatcacaattggcgaagcaaacagtcagatagataaaaagatcggtccg
gaaatatttacggtgaaggcgaccattaatcttttacgcactgaaaatattttatataaa
tcgtgccctagtgaaaactgcaaaaaaaaggtgatagatcaagcaaatggcatgtacagg
tgcgaaaaatgtaataaagaattccctaacttcaaatatcgtttacttggaagcctaagc
ttggctgactggacagataatatgtgggtcacagcatttaatgacgaaacagagaaaatt
ttaggtattacagctcaggaacttggagaattaaaagaaaatgataacgatgcctacctg
gaaaaacttggcgatgtaacatttaaaagtttcatatttaagataagaacgaaaatggaa
acattcggtgatgaaaacaggttaagatcaacatgtattgatgtatccccaactgattgt
aaagcctacaacgaagacttaataaccaaactcaaagaattaactggtattgatagtatt
taa
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