Bombus affinis (rusty patched bumble bee): 126922479
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Entry
126922479 CDS
T09368
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baff03400
]
126922479
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
126922479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
DUF4618
AAA_29
AAA_21
SMC_hinge
ABC_tran
DUF948
AAA_27
Motif
Other DBs
NCBI-GeneID:
126922479
NCBI-ProteinID:
XP_050591005
LinkDB
All DBs
Position
12:complement(3905505..3911338)
Genome browser
AA seq
1052 aa
AA seq
DB search
MNNNDIDKGIITYIYLENFVTYDKVCVKPGRNLNVIIGPNGTGKSTIVCAIVLGLGGKPT
TIGRATHVADYIKRGCEEAKIEIHLKNGKNNDIVIRRIFNKGGKSFWFLDNRQTGIKEIQ
ELTASLNIQVDNLCQFLPQDKVQDFSKMNAQELLENTERSVCSPIIVERHKNLIQYRIDH
KDLEKQIESKKKSLESKTQIYDNLKESVSSIKEKKLIKEKILHLKQKKAWILYEQKRKEL
VKLKDMKNAAQAKVAHLEAEIKPVNDAITEMKSEIQSLQTCLSDHKNKVKIKDMKLKKMI
DNIVDYENDVKDCENSCKQRIQIEEARDHDIDIAQKQKKKLDNDLLLMLKDIGSEEILVK
QRQEIISDIEKKRNIINMLISQASESKQKEDQLNLEIASQEAELQALNIGAKRLQLLRER
SVDTYKAVQWLRENRNKFSNMIHEPILLNINVKEASYAKYLENIIPFRDMIAFVCEDKQD
MNMLLHYLRDEQNLQVNVVHSDPAKDVSMNPIVPLQHIKQFGFTHYLVSLIEAPSTIMKY
LVSMYNLNNIPIGNNQVDDNIDRIPNNIRCYFSQNNVYMVNRSKYTGEKSIGMQPVSGTG
MLSIVLDRSRMLNIEEKLKILREKKNKESNKLKQLDEQVHEQNKELDKIKATRNKYQQDL
QQIQTLKSKIYIVEKKVVDLQNGRTTVEEIKKSSTKEIKKIMEKQIKIYKAYNTELVESV
KCIMDSETTDYVLTLRNRSLRVKINNSQDLRERLKEAEDKVKQLGQELQPLKYEVQRIFN
QALQTTNGISASDSAFAPIKKIFNKLPPTIEEINNELNIAQAKMFCMGNNIDGENILQEY
EQVEQNINQLKDLIQSKTQELQKTTQNIELLRKEWLTPLSQTIEKINSNFSMYFSAMDCA
GEVVLAQPENRMEFDQYGLKIRVKFRNTDQLQELTRYHQSGGERAVTTAIYMIALQELSR
VPFRCVDEINQGMDAVNERRVFNLLVKMTGRANSSQYFLLTPKLLPDLQYSETVMVHCVF
NGAFMINHTEFDTEKYCEFIVGAIERECTDDD
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaataataacgatattgataaaggaataattacttatatttatttagaaaatttcgtg
acttatgataaagtttgtgtaaaacctggtagaaacttaaatgttattattggccctaat
ggcactggtaaatcgacaattgtttgtgcgattgtgcttggattgggaggtaaacctacc
accattggtcgagccactcatgtcgcagattatataaaaagaggatgtgaagaagcaaag
attgaaattcatctgaaaaatggaaaaaataacgatattgttattcgaagaatatttaac
aaaggcgggaaatctttctggttccttgataatagacaaacaggtattaaagaaatacag
gaactaacagcaagtcttaacatacaggtagataatctttgtcaatttctcccacaagat
aaagtacaagatttttcaaagatgaatgcacaagaattgttagaaaatacagaaaggtct
gtttgtagtcccattatagtcgaacgtcacaaaaacttgatacaatataggatagaccat
aaggatttagagaaacaaattgaaagtaaaaaaaagtcgctagaatcgaaaactcagatt
tatgataatttaaaagaaagtgtcagtagtataaaagaaaagaaattaataaaggagaaa
attttacatttgaaacagaagaaagcatggatactatatgaacaaaaacgtaaagaacta
gttaagttaaaagacatgaagaatgctgcacaagctaaagtggcacatttagaagcggaa
ataaagcctgttaatgacgcaataacagagatgaagtcagaaattcaatcgcttcaaact
tgtctttcagaccataaaaataaagtcaagatcaaagatatgaaactgaagaaaatgata
gacaatattgtagactacgaaaatgatgttaaagattgcgaaaattcatgcaagcaaaga
attcaaatagaagaggcccgagatcacgacattgatattgcacagaaacaaaaaaaaaaa
cttgataacgatttattactaatgttgaaagatattggatctgaagaaattttagtgaaa
cagcgtcaagaaataatatccgacatagaaaagaaaaggaatatcattaatatgttaata
agccaagcttcagaatcaaaacaaaaagaagaccagctaaaccttgaaattgcatctcaa
gaagcagaactacaagctcttaatatcggagcaaaacgattacaattgttaagggagaga
agtgttgatacatataaagcagtgcagtggctaagggaaaatcgtaacaaattttcaaat
atgatacatgaacctatattacttaatataaacgtgaaggaagcttcctacgcgaagtat
ttggaaaatatcattccatttcgggacatgatagcatttgtttgtgaagataaacaagat
atgaacatgttgttgcattacttaagagacgagcagaatttacaagtaaacgttgtacat
tccgatcctgcgaaagatgtttctatgaatccaattgttccattgcaacacattaaacaa
tttggctttactcattacttagtatcgctgattgaagctccgagcaccattatgaaatat
ttggtgtctatgtataatttaaacaatatacccattggaaacaatcaagttgatgataac
atcgatcgtatacctaacaatatacgttgttactttagtcaaaataatgtatatatggta
aatagatctaagtacactggagaaaagtctatcggaatgcaaccagtatcgggtacagga
atgttatctattgtgttagatagatcaagaatgctaaacattgaagaaaaattgaaaata
ttacgagagaagaaaaacaaggaaagtaataaacttaaacagcttgatgaacaagtgcat
gaacaaaataaagagttagacaaaataaaagctaccagaaacaaatatcagcaagatctt
caacaaatacaaactctgaaatctaaaatatatatagtggagaaaaaagttgtagattta
caaaatgggcgaaccactgttgaagaaataaaaaaatcttctactaaagaaataaagaaa
attatggagaagcaaataaaaatatataaggcatacaatactgaattagtagagtctgtt
aaatgcattatggacagtgagacaaccgactatgtattaacattgcgtaatcgatctttg
agagtgaaaataaacaattctcaagatttaagagagcgactcaaggaagcagaagataaa
gtgaagcaattaggccaggaattacaacctctgaagtatgaagtacaaagaatatttaat
caagcattgcaaactaccaatggtatcagtgcctcggacagtgcgtttgcacccataaaa
aagatattcaataaattgccgccaaccatagaggaaattaataatgaattgaatatcgcg
caagcaaaaatgttttgtatgggaaataatatagacggagaaaatatattacaagaatat
gagcaagtagaacaaaatataaaccaattaaaagatttgattcagagcaaaacacaagaa
ttacaaaaaactacacaaaatatagaattgttacgaaaagaatggttaacgcctttatca
caaaccattgaaaaaattaattctaatttcagtatgtatttctcagcaatggattgtgct
ggtgaggttgtattggcacaaccagagaatcgtatggaatttgatcagtatggtctcaag
attagggtaaaattcagaaataccgaccaattacaagaattaacaagatatcatcaaagt
ggtggagaaagagcagtaactactgctatttatatgattgcacttcaggaattgtcaaga
gtaccatttcgctgtgttgatgaaattaatcagggcatggatgctgtaaatgaaagaaga
gtatttaatttgcttgtgaaaatgactggacgagcaaatagttctcagtattttttactc
acaccaaagttactaccggatttacaatattcagagacagtgatggtccattgtgtgttc
aatggcgcgttcatgatcaatcatacagaatttgatactgaaaagtactgtgagttcatt
gttggggcaatagaaagagaatgtacggatgacgactga
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