Bombus affinis (rusty patched bumble bee): 126922562
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Entry
126922562 CDS
T09368
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126922562
Transcription factors [BR:
baff03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126922562
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
CSRNP_N
TFIIA
Motif
Other DBs
NCBI-GeneID:
126922562
NCBI-ProteinID:
XP_050591223
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Position
12:complement(7736774..8095966)
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AA seq
498 aa
AA seq
DB search
MLTMESDLKGGSLHGQMPPHPHQGVSPMGHHTGVSPYGTLGSIVHSPALSGSPPSTGGLS
LGLQHHHQTPQHHYASMQAAQQQQQNMHSLAQQNAAQQQQHHPHQQQQQPQQQQQPAQHH
QPQNNNNNTNKNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLS
ETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFPIGSGVAGVGGMLGVDQR
QVGATGGPQQAQLSRDVYQMPNGYMPNGYMMHDPTTAYQQHVAYGGHMGGAAAAAAASAY
PRYDMGHHMGGGSPSPINSYMNGYGSYGSSSVPGGSPSPYHQAQPGSQISSHSPSGSSIK
SEPTSPASGGIHTPPTGASSTVAAGPQVVKREYMGQQNQQAQGDLRQMISMYLPQGVEQG
VVQHGAGVYSPGPSPDPLGQHHSGIPPLSHMAESDRKMLNPDTGCYSESVRAWYRYMWKR
YGDQHPNISSWDSYYSEK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgatggagtctgacctaaaaggcggcagcctgcacggtcaaatgccacctcat
ccacatcaaggtgtttcgccaatgggacaccataccggtgtatcgccttacggcaccctc
ggctcgatagttcacagtccagcattatcgggaagtcctccgagtaccggaggtttaagt
ttaggtttacaacatcatcatcagacgccccagcatcattacgcgtcgatgcaggccgcg
caacaacaacaacaaaatatgcattcgttggcgcaacaaaatgctgcgcaacaacaacaa
catcatccacaccagcagcagcagcaaccgcagcagcaacaacaaccagctcagcatcac
cagccacagaataacaataacaataccaataagaacaacaacatcgaccgcgtgaaaagg
ccgatgaacgcgtttatggtgtggtcccgtggccaacggcgtaagatggctcaagaaaat
ccaaaaatgcacaactctgaaatttctaagcgattgggtgcagaatggaaactgcttagc
gagactgagaaacgcccgttcatcgacgaagcgaagagattacgcgcggtacatatgaaa
gaacaccccgactacaaatacagaccgcgacgtaagacaaagactttgttgaagaaagat
aaattccctattggaagcggagtagctggcgttggaggtatgctaggcgtagaccagcga
caagtcggcgctaccggtggaccgcaacaagctcaattatcacgtgatgtatatcaaatg
ccgaacggttatatgccgaacggatatatgatgcacgatccgacgactgcatatcaacag
cacgttgcgtatggaggtcacatgggaggcgcagcagccgctgcagccgcttcagcgtac
cccaggtacgatatgggccatcacatgggcggtggcagtcccagtccgataaatagctac
atgaacggttacggtagctatggcagtagcagtgtaccaggaggttccccatcgccgtat
catcaagcgcagcccggttctcaaatatctagccacagtcccagcggtagtagtataaag
tcagaaccgactagtccagcgagcggcggaattcacacgccgccaacgggagcatcgtcg
actgtggctgccggaccgcaagttgtgaaacgggaatacatgggccaacagaatcagcag
gcgcagggtgatttgagacaaatgatctcgatgtatctaccccagggtgtcgagcaagga
gtcgtccagcacggcgccggtgtctattcgcccggtccgtcaccggatccgctcggccag
catcattcaggaatcccaccgctcagtcacatggcagagagtgatcgcaaaatgttgaat
ccagacaccggctgttactcggagtccgttcgggcatggtaccgatacatgtggaagagg
tacggtgatcaacatccaaacatctcttcctgggattcctactattcggagaaataa
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