Bombus affinis (rusty patched bumble bee): 126922710
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Entry
126922710 CDS
T09368
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03018
RNA degradation
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126922710
09123 Folding, sorting and degradation
03018 RNA degradation
126922710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126922710
03041 Spliceosome [BR:
baff03041
]
126922710
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126922710
mRNA degradation factors
5'-3' decay
Lsm complex
126922710
Spliceosome [BR:
baff03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126922710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
126922710
NCBI-ProteinID:
XP_050591513
LinkDB
All DBs
Position
1
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AA seq
91 aa
AA seq
DB search
MTSSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGSNITMLVPGGEMPDT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacgagttctgtcagtacaaatccatcaacattattgcctttagaattagttgataaa
tgtatcggttctcggatacatattattatgaaaaacgataaagaaattgtcggcaccttg
ttaggttttgatgattttgtaaatatgctgctcgaagatgtgacagaaagcgaagcaaca
cccgagggacgaagagtcaccaagcttgatcaaatactgcttaacggaagcaatatcaca
atgcttgtacctggtggagaaatgcctgacacgtaa
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