Bombus affinis (rusty patched bumble bee): 126922980
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Entry
126922980 CDS
T09368
Name
(RefSeq) E3 SUMO-protein ligase ZBED1 isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126922980
04121 Ubiquitin system [BR:
baff04121
]
126922980
Transcription factors [BR:
baff03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
126922980
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
126922980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
126922980
NCBI-ProteinID:
XP_050591898
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Position
13:complement(9913782..9917271)
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AA seq
619 aa
AA seq
DB search
MPKIRAKRSAIWLHFSIVYQNDGLNAIVRCNKCNLIVPYCKNTTNLWSHVRTHHKDVLEI
NSSSCKKEAGQAHTTASSSSETKYKAIISSKISDVLRRSSSNFTEAGEITRSLIQMIAED
VLPFSIVNGKGFINFVRTLNEKYKIPKRSILISKYLPDSYARKCMEIKESLSKATCVNVA
ISLQENTKRSGLILATSVHFCVDRVQHHKLLRISFQSTDDKFPILRELDEIGKLWQFCSK
INLVTYNDTYRTMTYATYNTCFGHTLNCVAQTAMKNTKVVFDVINKCRDVVCDFKINEIV
ASSQRFATNSSKILNLWGNAADCWISAYLMLNHVYELKPVLEKDALSKWEATSQTSPKIY
ERPDRDVPSVSEVEWNIISEIIKVLWPLHEATKELFSDLHVTISKIIPIVHGIEAALKDM
DDLSADGTLFRDNLLRCFSAQFKDVEESVGYAIATFLDPRYKDVAFHSKKCIENVKNILT
KSNVSDDENANSNESTIDSPETNDENVGTNILWAAFDKRVEELGVKPDNCVINCPSRHEL
ERYINLKIINRKDDPIAWWSTTGHVMFPNLSKIAADYLCAPAYSVSNNPLFSKLQKMLFD
RRVRLSDERTNMLAVIGSN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaattcgtgcgaaaagaagtgccatttggctgcatttttccatagtataccaa
aacgatggattaaacgcaatcgtcaggtgcaacaagtgcaatctcatagtgccttattgt
aaaaacacgacgaatctgtggtcgcacgtccgcacacatcacaaagacgttctcgagata
aactcgtctagttgtaagaaagaagcgggacaagctcatacaactgcatccagttcatca
gagaccaaatacaaagcgataatttcgtcaaaaatctccgatgtgctgcgaagatcgtct
tcgaatttcacagaagcaggtgagataactcgatctttgatacaaatgatagcagaagac
gtgcttccgttttcaatagtcaatggcaaaggattcatcaatttcgtgagaacgttgaac
gaaaaatacaaaataccaaagagaagtattttgatctcgaaatacttgccagactcgtac
gcgcgcaaatgcatggagatcaaggaaagtttgtcgaaagcgacgtgtgttaacgttgcg
attagtttgcaggaaaatacgaagcgcagtggcttgattctcgcgacaagcgtccatttc
tgtgtcgatagagtccaacatcacaagttattgaggatctcgtttcaatcaacggacgac
aagtttcccatattacgcgagctcgatgaaattggtaagctctggcaattctgttcgaaa
ataaacctcgtcacttacaacgacacgtatcgtactatgacgtatgccacgtacaacact
tgtttcggtcacacgttgaactgtgtagcacagactgcgatgaaaaacacgaaagttgta
tttgacgtgataaataagtgccgagacgttgtctgtgattttaaaattaacgaaatcgta
gcgagttcgcaacgatttgctacgaattcttcgaaaattttgaacttatgggggaatgcg
gccgattgttggatctccgcgtatttaatgctaaaccacgtgtacgaattaaaacctgtt
ttagagaaggatgcattatctaaatgggaagcaacttctcagacgtcgccaaagatatac
gaaagacctgacagagatgtaccatccgtgtcagaagttgaatggaatataatttcggag
ataatcaaagttttgtggccattgcacgaagcgacaaaagaattgttctctgatcttcac
gtgacaatttcgaaaataatacctatcgttcatggtatagaggctgctttaaaagatatg
gatgatttgtcggccgatggcacgttgttccgtgacaatttgttgagatgtttctctgca
caatttaaggacgtcgaagagtcggttggctacgctatcgccacatttttggatcctaga
tacaaggatgtcgcgtttcattccaagaagtgtatcgaaaatgtgaagaatatattgacg
aaatcaaacgtttccgacgatgaaaacgctaattctaacgaatctacgattgatagtccg
gaaacgaacgatgaaaatgtaggaacgaatattttatgggcagcgtttgataagagggtt
gaggaattgggcgttaaacctgacaactgtgttattaattgtccatcaaggcacgagttg
gagagatatataaatttgaaaataattaacagaaaagacgatccgatcgcatggtggagt
actacgggccacgtgatgtttccaaacctttcaaaaattgcagccgattacttgtgcgca
cctgcatactctgtatctaacaatcctttattttcaaaattgcagaaaatgttatttgat
cgaagagtacgattgtcagacgaacgtactaacatgctcgctgtgataggttcgaactaa
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