Bombus affinis (rusty patched bumble bee): 126923098
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Entry
126923098 CDS
T09368
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126923098
Membrane trafficking [BR:
baff04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
126923098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
PH1_SSRP1-like
Motif
Other DBs
NCBI-GeneID:
126923098
NCBI-ProteinID:
XP_050592119
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Position
13:11289169..11295540
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AA seq
1358 aa
AA seq
DB search
MSWFDATGFANLAKSALKEAQKTIDKALDIKDEDQKSMESHTEDTTDFFASWGIKNDVHY
TVQPRHDKSKAPKQEATSSIWGSFTGSFFESPKFNEPEQNAKAIIHSKSLQSTPTESIKK
LVSSSSFSEDYKSKPLSPKKKSKQAKNYKEKNTNNQIENVPSQDVSNTSDFNELKQLPPT
ETIDTSTTFDKDDRINDCPKIIECSSEEKKDVDVKEEDEKLESEKKETCEHDLDSPVSTS
NKLSFVSPENDKKSSESIEILGSRSNTDCTTTPELDGSPSAKGTKVNSESIEVLPDSMVT
SPSSGVEVLEDWKSDTSPYLSPMEQRHSDSSSILDRDDTVTPCWDDINVPQIMNKENEIN
QSPSDISLYEPPMEKIKTSHENLCMSSMDSTPSTDIYQGLGSHLYKSVSSNHSIKASPES
IEVIPYTDDERDETNLAEDSYTSASESTIVTMLEMHQQKDQANNEMETSSSISVSEKMQD
SSSDDKLTLKKASTDTRLNLNLDSVTEKHSLHLPIEAITTQPIRKPEYFDGAGQISKPDR
KSFDRLMNSTIEPAETECYSTSEIIHPFKSEMAEISDQHLISTDSSCEGTLIGSSEENPQ
YKSEERILQAPLNSSSYVKTMLEDAMIEKAGEIETEVQGTEMPRENSPISSESRSDLIKI
GSDQTSGHTSGDELETTTSSDIEVISRYSPNGDSSSTQSRQKLQSTRGCDLLMRTLKTKG
HSRELSEISVGSDETNVEIEKLLKRIQEMTEILEARESKLIDVSRMNMELQEQNNNLKKQ
LDSFEKHAEQSQSINQITDEYTQRLSALERKFQQAIRERDSLRKNLEQLKVEAATRLSSQ
ELSTLNAEKDEIIKELRDEGEKLSKQQLQHSNIIKKLRVKEKENDALIKSQKEQIEEQTS
ELERLKRSLRAKEEVELSQIDAVYSLTARTKTLEKEVATLQKQLENAIQNAETYKKNLDT
TKTELSETKKILTATETELKEATTNAGESCQLLVQVEELKIKLREFEEMHVKKEEFLKHE
NSELLKRLEAAEARSEELSESVSTATKPLLRQLEQLQANLLHKTNSFMKQEKTLSDKNIE
LQTKIENLLETDRYIKEENVNLKSKMSQLEAKLAAKENERMRLQELYDELIIQKDKLGEQ
NMRQRQAIESLDQSHISEIMELKREIIALENKLSIEKAATDAERRKNHVMSEQQQNIEDN
ERLSPTPSTEQDSANTIDSIWPLYNSTAENKAESYTMTFDTIRASSSSTSIFENLQAQLK
QKDGEIQQLQWELSRRNIERDVLNSELSTLTLKIEELNVKVMDVAVLNESLREIQTRYDA
LLQMYGEKMEENQELRLDLQDVKEMYKTQIDQLLKRDA
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtttgatgccactggatttgccaatttggctaagtccgcgctaaaagaagct
caaaagacgattgataaagcattagatattaaagatgaggatcagaaatcgatggaaagc
cacacagaagatacaacagatttttttgcatcatgggggataaagaatgatgttcattat
actgtacagccacgtcatgataaatctaaagcacctaaacaagaagccacaagcagtata
tggggcagttttactggatcattttttgaatcacctaaatttaatgaaccagaacaaaat
gccaaagctattatccattctaaatctttgcaaagtacacccactgagagtatcaaaaag
cttgtatcttcgtcatcattctcagaagattataaaagtaaaccattgagtcccaagaaa
aagagtaaacaagcaaaaaattacaaagaaaagaatactaataatcagatcgaaaatgtt
cctagccaagatgtttcgaatacatctgatttcaatgaattaaagcaacttccaccgact
gaaacaattgatacaagtacaacttttgacaaagatgacaggattaatgattgtcctaaa
ataattgaatgttcttcagaggaaaaaaaagacgttgatgttaaggaggaagatgaaaag
ttagaatctgaaaaaaaagaaacttgtgagcatgatttagattcacctgtctctacatca
aataaattgtcttttgtatctccagaaaatgataaaaagagttcagagagcattgaaatt
ctgggttctcgatctaacactgattgtactacaactcccgaattggatggtagcccatct
gcaaagggtaccaaagttaattcagagtcgatagaagtattgccagacagtatggttaca
tctccaagttctggagtggaagtattagaagattggaaaagcgatactagcccttattta
tctcccatggagcaaagacactctgattcatcgtctattttagatagagatgatacagtg
accccttgctgggatgatatcaatgtcccacagattatgaataaagaaaatgaaataaat
caatcaccttctgatatttctctgtatgaacctccgatggagaaaatcaaaacatcacac
gaaaatttatgtatgagcagtatggatagcacaccatcaacagatatatatcaaggtctt
ggatcacatttatacaaaagtgtatccagtaaccattcaataaaagcttcaccagaaagc
atagaagtaataccttacactgatgatgagagagatgaaacaaatttggcagaagattct
tatacttctgcatcagaaagtacaattgtaacaatgctagaaatgcatcagcagaaagat
caagcgaataatgaaatggaaacttctagtagtatttcagtaagtgaaaaaatgcaggat
tcgagttcagatgataagctaacattgaaaaaagctagcacagatacaagactaaatttg
aatctagattctgtaaccgaaaagcatagtttacatttgccgattgaagcaattacaacg
caaccgattcgcaagccagaatattttgatggagcaggtcaaatatccaaacccgatcga
aaaagtttcgatcggttaatgaattcaactatagaacctgcagaaacagaatgttattct
accagcgaaattattcatccgtttaaatcagaaatggcagaaatttcagatcagcatttg
atttcaacagattcaagttgtgaaggaactttgatagggagttcagaagaaaatccacag
tataaatcagaagaaagaattttacaagcacctttaaactctagttcttacgtaaagaca
atgttagaagatgcgatgatcgaaaaagcaggtgaaatcgaaacagaagtacaaggcacg
gaaatgcctcgagaaaattcacctatttcatcagaaagtcggtccgatctaattaaaatt
ggttcagatcaaaccagtggtcacactagtggtgatgaattagaaaccactacttctagc
gatatcgaagttatatccaggtacagtccaaatggtgattcgagttcgacacaatcgcga
cagaaattgcaatcaacaagaggttgtgatcttttaatgagaacattaaaaactaaagga
cattcgagggaattgagcgaaatcagcgtaggatctgatgaaacgaacgttgagatagaa
aaattattgaaacgtatacaagagatgacggaaatattagaagctagggaatcgaaactc
atcgatgttagtagaatgaatatggaattacaagaacaaaataataatttaaagaagcaa
cttgatagctttgaaaaacacgcagaacagagccaaagcataaatcaaatcactgatgaa
tatacacaacgattatctgccttagaaagaaaatttcagcaagcaatacgagaacgagat
tcactaagaaagaatttggaacagttaaaagtagaagcagctacgcgtttatcgtctcaa
gaactgtctactctgaatgccgagaaagatgaaattattaaggaacttcgagatgaaggt
gaaaaattaagtaaacagcagcttcaacacagtaacattatcaaaaaattgcgagttaaa
gaaaaagaaaatgatgccttaataaaaagtcaaaaagagcaaatagaagaacaaacctca
gaattagaacgtttaaaaagatcattgcgtgcaaaagaggaagttgaactatctcagata
gatgctgtttactcgttaacagcacgaacaaaaacattggaaaaagaagtagcaacgtta
caaaagcaattagaaaatgcgatacaaaatgcagaaacgtataaaaagaatttagatact
acaaaaacggagctatctgaaacaaagaaaattttgactgcgacagaaacagagttaaag
gaagcaacgactaatgctggagaatcatgtcaattacttgtgcaagtagaagaattgaaa
atcaaattaagagaatttgaagaaatgcatgtcaaaaaggaagaatttttgaaacacgaa
aatagcgaattactaaagcgcttagaagctgctgaagctagaagcgaggaactttcagaa
tctgtatcaacggccacaaaacctttactgagacaactggaacaactccaagcaaatttg
ttacacaaaactaatagttttatgaaacaagagaaaacattgtcagacaaaaatattgag
ttgcaaacaaaaatagaaaatttactcgaaacagatcgttatattaaggaagagaatgtt
aatttaaaatctaaaatgtctcaattagaagctaagcttgctgcgaaagaaaatgaaaga
atgcgtttacaagaattgtatgatgagttgataatacaaaaggataagcttggtgaacaa
aatatgaggcaacgacaagcgatagaaagcctcgatcaatctcatatttcggaaataatg
gagttaaaacgagaaattattgcgttagagaataaattatctatagaaaaagcagctaca
gacgcagaaagaaggaaaaatcatgtaatgtcagaacagcaacaaaatattgaagacaac
gaacgacttagtcctacccctagcacagaacaagattctgcaaataccatagacagtatt
tggccgttgtacaattctactgccgaaaacaaagctgaaagctatacaatgacgttcgac
actatcagagcgagttctagtagtacttctatatttgaaaatttacaagctcaattgaag
caaaaggatggtgaaatacaacaacttcagtgggagttatcacggcgtaatatagaaaga
gacgtgttaaattcagagttatctacattaactttgaagatcgaagaattaaatgttaag
gttatggatgttgcggttttaaacgaaagtttacgagaaatacaaactagatatgatgcg
ttattacaaatgtatggtgaaaaaatggaagagaatcaagaactacgtttggacctacaa
gatgtcaaagagatgtacaaaacacaaattgatcagcttttgaagcgagatgcctga
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