Bombus affinis (rusty patched bumble bee): 126923103
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Entry
126923103 CDS
T09368
Name
(RefSeq) DNA topoisomerase 3-alpha-like isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03440
Homologous recombination
baff03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126923103
03460 Fanconi anemia pathway
126923103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baff03032
]
126923103
03400 DNA repair and recombination proteins [BR:
baff03400
]
126923103
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
126923103
DNA replication proteins [BR:
baff03032
]
Eukaryotic type
DNA Topoisomerases
126923103
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
126923103
FA (Fanconi anemia) pathway
126923103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_Ribbon_TF
CUT_N
Motif
Other DBs
NCBI-GeneID:
126923103
NCBI-ProteinID:
XP_050592153
LinkDB
All DBs
Position
13:10690655..10695054
Genome browser
AA seq
1043 aa
AA seq
DB search
MLFVIKVFNIAKLSLYEPKKYQIFVRFESSFTVMKVLNVAEKNDAAKSIAGYLSRGCFKR
REGLSPYNKIYEFNSYLWNQNCEMVMTSVSGHLLNYEFVGAYRKWQGCHPLSLFDAPIIK
QCSEENSTKIKKSLEREVQKCGALIIWTDCDREGENIGFEIIQVCHAIKSNIRIYRAKFS
EITQASVNRALQNLCEPNKAISDAVDVRSELDLRIGAAFTRFQTLRLKQVFPTTLADMLI
SYGSCQFPTLGFVVERFLAIKRFKSEPYWKIKVMDIRDNISVEFRWARGTLFEKLPCEVF
LDICLEQPMATVKKVLSKPKNKWRPLPLDTIELEKQGSRKLHLSAKDTMRIAEKLYTQGL
ISYPRTETNIFPKELNLVPLVNQQVNNSAWGNFAQQLLEKGLTPRQGKKSDQAHPPIHPT
KYTDGLNGNEAKVYEFVVRHFLACLSCDAVGQETTVEIDIAGEKFAANGLQIIEKNYLNV
YIYENWNDKEIHIYQEGQVFQPTSIDMVEEKTCPPQLLTEADLISLMDKYGIGTDATHAE
HIDTIKSRHYVGLIDGKHLIPGKLGIGLVMGYDNMGFEMSKPNLRAELEKDLKLICDGQR
SPKDVLEIQLKKYRDLFKLTIEHANLIDIALADYLDERPSNTQVEISHPPQEIIFKCPKC
NSDMILKDRKQGAGKYIGCMSFPTCNNVIWFPQTIEHVEVLDEVCSECIGNIRKLKFKLL
RNAFPIYGTDYTTCIGGCDPMFNEVLNIKNECIKSQESGYHSTFNRTIVSNSSSIRNTVT
HPSSNAENRSLSESNASIGPMRNENDDRYTSRSRNVKRQNVPKNNTWIDANNVNSSNNDQ
RLIRNEQKTWGNIDDDAIIMCNCHENAIRLTVKKEGPNHGRIFYKCAKRQNSCNFFLWAS
EDNTQQMQNNTNSSSNQMFIASTSTRSNVHVNSYQDDPTLSQNDIKCHCNQNAIQRIVQK
DGPNKGRPFYTCPKSIKESCKFFQWADENGGNTYNVSEGQNKGTFREKKNLSKRHHIATG
KRKCGICGTEGHTRRTCPENAMD
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgttataaaggtatttaatattgcaaagttaagtttatatgaaccaaaaaaa
tatcagatttttgtaagatttgaaagttcttttacggttatgaaagttctcaacgttgcg
gaaaagaacgatgccgcaaaaagtatcgcgggctacttgtctcgtggctgttttaaacgg
agagaaggattatcgccatataataaaatttatgaatttaactcgtatttatggaatcaa
aattgcgaaatggtcatgacttctgtatctggtcatttattaaattatgagtttgttggg
gcatatcgtaaatggcaaggttgtcatccattaagtttattcgatgcacctataataaag
caatgttcggaagagaattctactaagattaaaaaatctttggaaagggaagtacagaaa
tgtggtgcattaattatttggactgattgtgatcgtgaaggagagaatataggttttgaa
attattcaagtctgtcatgcaattaagtctaatattcgtatatatagagcaaaattttct
gagattacacaagcatctgtaaatagagctcttcaaaatttatgtgaaccaaataaagca
attagtgatgctgttgatgtacgaagtgaattggatctaagaataggtgccgcatttaca
agatttcaaacactaagattgaaacaagtatttcccacgactctggctgatatgctgatt
agttatggcagctgtcagtttcctacattaggatttgtagttgaaagatttttagccata
aaaagattcaagtcagaaccatactggaagataaaagtaatggatatccgtgataatatt
tctgtggaatttagatgggcaagaggaacactatttgaaaaattgccttgtgaagtattt
ttggatatatgtttggaacagcctatggctactgttaaaaaagtattaagtaaacctaag
aataagtggagaccactaccactggacacaattgaactggaaaagcaaggctctcgtaaa
cttcatttaagcgcgaaggacactatgagaattgcggaaaaattatatactcaaggtttg
attagttacccacgtacggaaacaaatatatttccaaaagaattaaatttagttccattg
gtgaatcaacaagtaaacaattcagcatggggcaattttgcacagcaattattagaaaag
ggattgactcctagacaaggcaagaaaagcgatcaggcacatcctccaatacatccaaca
aaatatactgatggtttaaatggcaatgaagctaaagtttatgaatttgtggttcgacac
tttttggcttgtttatcatgtgatgcggtaggccaagaaacaacggtagagatcgatata
gctggtgaaaaatttgctgctaatggtctacaaattattgaaaagaattatttaaatgtg
tacatatatgaaaattggaacgacaaagaaatacatatatatcaagaaggacaagttttc
caaccaacgagcatagatatggtagaggaaaaaacatgtcccccacaattgttgactgaa
gctgatttgatcagtttgatggataagtacggtattggtaccgatgctactcatgcagag
catatagatacaataaaatcgcgtcattacgtgggtttgatagatggaaagcatctaata
cctggaaaacttgggattggattggtaatgggttatgataacatgggatttgaaatgtca
aaaccaaacttaagagctgaactcgaaaaggaccttaaattgatatgtgatggacaaaga
agtccgaaagatgttttggaaattcaactaaagaaatatcgtgatctatttaaactaacg
atagaacatgctaatttaatcgatattgctttagctgattacctcgatgaacgaccgagt
aatacacaagtagaaattagtcatccacctcaagaaattatctttaagtgtccgaaatgc
aactcggatatgatccttaaagatagaaagcaaggcgcgggaaagtatattggttgtatg
tcgtttccaacatgtaataatgtaatttggttccctcagactattgaacatgtcgaagtt
ttggatgaagtttgttcagaatgtataggaaatattcgtaaattaaaatttaaactattg
agaaacgctttccccatttatggtactgattatacaacttgcataggtggttgtgatcct
atgtttaacgaagtattaaacataaagaacgaatgtattaaaagtcaagagtctggttac
cacagtacatttaacaggactattgtctcaaattcatcttcaataaggaacactgtaact
catccatcttcaaatgctgaaaacaggagtttatctgaaagcaatgcatctatagggccc
atgcgaaatgagaacgatgatcgttatacaagcagatcaagaaatgttaaaagacaaaat
gttccaaagaataatacatggatcgatgctaataatgtcaattcttcaaataatgatcag
aggttgattagaaatgaacaaaaaacatggggtaacatcgatgacgatgctattattatg
tgtaattgccatgaaaatgcgattcgattaacagtaaagaaagaaggaccaaatcatgga
aggatattttacaaatgtgcgaaacgtcaaaatagttgtaacttttttctttgggcatca
gaagacaatacacagcaaatgcaaaataatacaaatagtagttcaaaccagatgttcatt
gccagtacaagcactagatcaaatgttcatgttaatagttatcaagatgaccctacgtta
tcacaaaatgacattaaatgtcattgtaatcaaaacgcaatacagcggattgtacagaaa
gatggtccaaataaaggacgtcctttttacacatgccctaagagtataaaggaatcttgc
aaattctttcaatgggcggatgaaaacggtggaaatacatataatgtgtctgaaggacaa
aataaaggaacatttagagaaaagaaaaatttatcaaaaagacatcacattgctactggt
aaaagaaagtgtggaatctgtggtacagaaggacatacaagaaggacttgtcccgagaat
gcaatggattaa
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