Bombus affinis (rusty patched bumble bee): 126923167
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Entry
126923167 CDS
T09368
Name
(RefSeq) CLIP-associating protein 1-A isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
baff03036
]
126923167
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
baff04812
]
126923167
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
126923167
Cytoskeleton proteins [BR:
baff04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
126923167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
Cnd1
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
Adaptin_N
INTS1_R4
Arm
Tti2
Ipi1_N
RICTOR_N
Sec7-like_HUS
Arm_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
126923167
NCBI-ProteinID:
XP_050592293
LinkDB
All DBs
Position
13:12013804..12042788
Genome browser
AA seq
1478 aa
AA seq
DB search
MAVNPRDMDGFMPLLSTTDIKKKLNVGSLLLNYLGDATKSIECQDIGQFIDNIIPWLSNG
NPKVVQNGLEILTFLADRMGHDFKPYISTIIQPTIDRLGDSKDATREKAQLVLLKIMEKG
CMSPQQLLDRLRPAFSHKNAKLREEALILLTTTLNEHGADEMILSGVIPSIVKLLSDPSE
KVRETALNTLADIYRHVGERLRVDLQRKHNVPQAKLLLLIEKFDQLKAAGDLLPLAMSSD
VGKTTDETDRAIKSAPVKRLAAAAAAAPPKRGQFGPAKAPSSALAQPGNTSSMVPRATTV
KRNVSVKSTPGQAGAVDEETFLTAFEDVPSVNLFSAKDLEEQMKIIRENVGDDKKDWKQR
TESMKKLRAIVIAGGTNYENFLENLKSVQRSFEVACTDLRSQVVREACITLAFLSQQLKN
KFASFGEAVLLTLMNLIQNSAKVVATAGAVAVRFILQNTHYSRFVPIITSCLSHKSKDIR
RASCEYLNLILQIWPTQILQKHLTILQDTIKKGIADSDSEARAFARKSYWAFKDHFPEQA
EALLNSLDTAYKRSLMSLSNSGSINSLNVVTRSASVSPRTSRPVISATGSTENLHQSSGQ
PHGPLRRTPSLPRSYRQSGIPVLQRPTDSHYRATPGVRSTSAIDLQAAQRAKARMMYANM
SRQKASLPRPSKSPDTTAVASPERTARTRTRVSGVSQSQPSSRSGSPSSRLSYATYNREG
ESLIARPRRLSGHGIRSTGNSREPSPQRFGMDRSFASKIRGRSLHMSPTDRPQSRPVMAQ
KMLQQSREAESALADALTFENIDNYPRTPRGKGDHSDDSETSSICSERSMDSFRRPNDSF
SWSGSQQRLYRDMWDQSIPKDIKEIIENCAHKHWGDRKEGLVGLQHFLSNGNTLTATELR
KVTDIFTKMFMDSHTKVFSLFLDTLNELVATHSEDLGDWLYVLCARLLNKLGTDLLGSIQ
AKIHKTLEVVRECFPGEQLLPAVMRYLTDPTQTPNSRVKIATLVFITQIAETAEPSALIN
SAGTALARLLDWSNDVKSQDVRRHAQNAVISLYNLNPPKVTMILSELPKYYQEAALPLVQ
NHLRKSSGSSNPASPGTPPPRAQSSPARSKGKGDIDNADENLEEVYKSLRRTTAEIQNYG
FERLERATTSKDSGISNMADVEEKMEGLTLCNSGRSSSVSSPTQRGRSVTNITVNGSSDT
IAGDLILPQENNGYKTHGSSPDSIKRPEVLDNMIKTLQSKMTQTEEKVSALQEFQLYVRE
GDALYIKQNFKKLLKTLLDSLTNDSKKMQVEVLQTLIDMLKCPELVDSFSVYPELLVLKV
INAYKLDDQKQDSSTSSNSRSPVLWMAEKCAATIAMILKPEQVIHLVSTIITTEPYPLNM
GAIKMLHKVVEHWGRDAIEPHLSKVMPGLIKAYDDNESAVRKSAVFCMVAIHLAVGEELL
KPHLSCLYTSKLKLLNIYIQRAQQANSQPASPRSNSKN
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaatccgcgtgatatggacggttttatgccgctcctgtcaacgactgacatc
aagaaaaagttaaacgttggtagtttgctgttgaattacttgggagatgcgaccaagagc
atcgagtgtcaagacatcggacagtttatcgacaacattataccatggttaagcaacggc
aaccccaaggtcgtgcagaatggtttagaaatcctcacgtttctcgcggatcgaatgggt
cacgacttcaagccttacatttccactattattcagccaacgatagacagactaggtgac
agcaaggatgcgacacgggaaaaggcgcaactggtgcttctcaaaataatggagaaaggg
tgtatgtctcctcaacaacttttggacagactgcgaccggcctttagtcacaaaaatgca
aagttacgagaggaagctctgattctactgaccacgacgttgaacgagcacggcgccgat
gaaatgatactgtccggagtgattccaagtatcgtgaaattattatcggatccatccgaa
aaagtgcgagaaactgctttaaacacattggcggatatctacagacacgttggtgaaaga
ttgcgagtggatttacagagaaagcacaatgtaccgcaagctaaattgctgttgctgata
gaaaaattcgatcagctgaaagccgctggcgacttgctgcctctagccatgtcctcggac
gttggcaaaaccaccgatgaaacggacagagcgatcaaatcggctcctgtgaaaaggtta
gctgctgctgctgctgctgctcctccgaaaagaggacaattcggtcctgcgaaagctcca
tcttcagctctagctcagcctggtaatacatcttccatggttccaagggctacaaccgtc
aaaagaaacgtgtcagtaaaatcgacaccaggtcaagctggtgccgtcgacgaggaaact
ttccttacagcgttcgaagatgtgccatctgtaaatctgttttccgcaaaagatctcgaa
gagcagatgaaaatcataagagaaaatgttggtgacgataaaaaagattggaaacaaagg
acagagagtatgaaaaaattaagagcaatcgttatagccggtggtacgaattacgaaaac
tttttagaaaacttgaaaagcgtgcaaagatctttcgaagttgcttgcacggatcttagg
tcgcaggtggtaagggaggcgtgcattaccttggcgtttcttagtcaacagttaaaaaat
aaattcgctagttttggagaagcagtcttactcaccttaatgaacctcatacaaaatagt
gccaaggttgtggcaacagctggagccgtagccgtgaggtttattcttcagaatacgcat
tatagtcgtttcgtgccaattatcacatcctgtttaagtcacaagagcaaagacatacgt
cgagcatcgtgcgaatatctaaatctaattttacaaatatggcctactcaaatattacag
aaacacttgaccatcttacaagatacgatcaagaaaggtatcgccgactcggattcggaa
gcaagagcctttgctaggaagtcatattgggcattcaaagatcattttccggaacaagca
gaggcattgctcaacagcctcgacactgcgtataaacgctcgttgatgtcccttagcaat
agcggtagcatcaacagtctgaacgtagtgacgagatcggccagcgttagtcctcgaaca
tccagaccagtaatcagcgccacaggtagtacggaaaatttgcatcagtcttcgggtcaa
ccccatggcccgctcagacgaactccgtccttgccacggtcttatcgtcagtctggtatt
ccagttctccaaagacccactgatagtcattatcgtgcaactccgggcgttagatctact
agcgctattgatttgcaagccgcgcaaagagctaaagcgagaatgatgtacgcgaatatg
agcagacagaaagcgtcccttccacgacctagcaaatcaccggacacaaccgccgttgct
agtccagaaagaaccgcaagaacaaggaccagagtatccggagtctcgcaatctcagcct
agcagcagatcgggatcaccgtcctcgagactcagttacgcaacgtacaatcgcgaagga
gaatcgttgattgcaagacctagacggttatccggtcacgggatcagaagtaccggtaac
agtcgcgaaccaagcccgcaaagatttggaatggatagaagtttcgccagcaaaatacgg
ggaagaagtttacacatgtctccgacggacaggcctcaatccagaccagttatggcacaa
aagatgctgcagcagtcgcgcgaggcggaatcagcgttggcggacgcgcttaccttcgaa
aatattgacaattatccaagaacaccaagaggaaagggcgatcacagcgatgacagtgaa
accagcagcatatgctctgaacgaagtatggacagctttaggcgaccgaacgattcgttc
tcatggagtggctctcaacaaagactgtatcgtgatatgtgggatcaatctatcccaaag
gatatcaaggaaatcatagagaattgcgcgcataaacattggggcgataggaaagaaggt
ttggtcggattgcaacattttctttcaaatggaaatacgcttacagccacggaattgcgc
aaagtaacggacatctttacgaaaatgttcatggattctcacacgaaagtattcagttta
tttttggacacgctgaatgaattagtagctactcatagcgaagatctcggtgactggctt
tatgttttgtgtgctcgacttttgaataaattaggcaccgacttacttggatcgatacaa
gcgaagatacacaaaacgctcgaggtcgttagggaatgcttccccggagagcagcttttg
ccggctgtaatgaggtatttgacggatccaacgcaaacgccaaattctcgtgtaaaaata
gccacactcgtgtttatcacgcaaatagcagaaacggcagaaccatctgctcttattaac
tctgctggtacagcgctcgcgaggttactcgactggtcgaacgatgttaaaagccaagat
gttagaaggcacgcacaaaatgctgttatatcgttgtataatttgaatcctccgaaagtc
actatgatattgtccgaattacccaagtattatcaggaggcggcactgcctttagtgcaa
aatcacttgaggaaatcgtcgggttcgagtaatccagcgtcccctggaactccgcctcct
agggcgcagagctcaccagctcgttcgaaaggtaaaggtgacattgacaatgcggatgaa
aacttggaggaagtttataaatctttaaggcgtacgacagcggagatacaaaattacggt
ttcgaacgtttagaaagagcaactaccagcaaagacagtggaatcagcaatatggccgat
gtcgaggaaaagatggaaggactcacattatgcaactcgggtcgttcgtcttctgtttct
tcgcccacgcaaaggggacgatctgtgactaatattacagttaatggttcaagcgatacg
atcgccggggatcttatcctacctcaggaaaataatggttacaaaacccatggatcatcg
cccgactcgataaaaaggccagaagttttagataatatgattaaaacgttgcaatccaag
atgacacaaaccgaagaaaaagtatcagctctacaagaatttcaattgtatgttcgcgaa
ggagatgctttgtatattaaacagaattttaaaaagctgctcaaaacgttgttagatagt
ttgaccaacgatagcaagaaaatgcaggtggaagtacttcaaactttaatcgatatgctt
aaatgtccagaacttgtcgacagtttttccgtctatcctgaattgctggttttaaaagta
attaacgcgtataaattagacgaccagaaacaagattcttccactagtagcaattcaaga
tctccggttctctggatggcggaaaaatgtgctgcaacgatagcgatgattctaaagcca
gaacaagtgattcacctagtatcgactataataactaccgaaccatatcccctgaatatg
ggcgcgataaagatgcttcacaaggttgtggaacattggggtcgcgatgctatagaacct
catttgtcgaaagtcatgcccggtctcatcaaagcgtacgatgataatgaaagcgcggta
cgtaaaagcgctgtgttttgtatggtagcgatacatttggcagttggcgaagaattattg
aaacctcatctcagctgcttgtataccagcaaactgaagcttttgaacatttacatacaa
cgcgcgcaacaagcaaacagtcaaccggcaagcccacgtagcaatagtaaaaattaa
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integrated database retrieval system
