Bombus affinis (rusty patched bumble bee): 126923398
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Entry
126923398 CDS
T09368
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03030
DNA replication
baff03410
Base excision repair
baff03420
Nucleotide excision repair
baff03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126923398
03410 Base excision repair
126923398
03420 Nucleotide excision repair
126923398
03430 Mismatch repair
126923398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baff03032
]
126923398
03036 Chromosome and associated proteins [BR:
baff03036
]
126923398
03400 DNA repair and recombination proteins [BR:
baff03400
]
126923398
DNA replication proteins [BR:
baff03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126923398
DNA Replication Termination Factors
ELG1-RFC complex
126923398
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
126923398
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126923398
Check point factors
HRAD17(Rad24)-RFC complex
126923398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
Rep_fac_C
AAA
AAA_11
ATPase_2
AAA_16
T4SS-DNA_transf
VHS
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126923398
NCBI-ProteinID:
XP_050592765
LinkDB
All DBs
Position
13:complement(6990099..6991808)
Genome browser
AA seq
355 aa
AA seq
DB search
MSLWVDKYRPTALGKLDYHKKQADYLKNMIQKGDFPHLLVYGPSGAGKKTRIMCIIRELY
GSGVDRLRMETMTFETPSKKKLEITTISSNYHIEVNPSDVGIHDRVVVMDLVKTTAQTHQ
IDPSGQKEFKVVLLTNVDQLTKEAQHALRRTMEKYVTTCRLILCANSTSRVLPAIRSRCL
GIRVPAPSISDIKDILHSICKREGLTLPDELATRLAECSGRNLRRAILMLEACKVEQYPF
TADQSITEPDWQVYIRNTANMMVSEQNPKKLLTIRNRLYELLTHAIPCDLIFKGLLQECI
KNCDLQLKIEIATVAAEYEHRMHRGSKPIFHLEAFVARFMAIYKKFIDSSLEGFV
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctgggtagataaatatcgtccaacagcacttggaaaattggattatcataaa
aaacaagcagactatttaaaaaacatgatacaaaaaggagattttccacatttattagtt
tatggaccatcaggggcaggaaaaaagactcgtataatgtgtattataagagaattatat
ggaagtggtgttgacagattaagaatggaaactatgacatttgaaacaccttccaagaag
aagctagagataacaacaataagtagcaactatcacattgaagtaaacccaagcgatgtt
ggtatacatgatagggtagtagtgatggacttggtgaaaacaacagctcaaactcatcaa
atagatcccagtggacaaaaagaatttaaagtggtattactgactaatgtggatcaactt
acaaaagaggcacaacatgctcttcgaagaacaatggagaaatatgtcactacatgtagg
ctaatactttgtgcaaattcaacatctcgtgttctgccagctatcagatcacgatgttta
ggaattagagttccagcaccatcaatatcagatataaaagatattttgcattcaatttgt
aaacgcgaaggtttaactttaccagatgaactggctacaagattggctgaatgtagtggc
agaaacctcagacgagcgatattaatgcttgaagcttgtaaagttgagcaatatccattt
actgcagaccaaagtattacagaaccagattggcaagtgtatattcgtaatacagcaaat
atgatggtcagtgaacagaatccaaaaaagcttcttacaataagaaacaggctctatgaa
ttattaacacatgctataccatgtgatttaatatttaagggtcttttacaagaatgtata
aaaaattgtgatcttcagctaaaaattgaaattgcaacagttgcagcagaatatgaacat
agaatgcacagaggatcaaaaccaattttccatttagaagcatttgtcgcacgatttatg
gcaatttacaaaaaatttatcgattcatctcttgaaggttttgtgtga
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