Bombus affinis (rusty patched bumble bee): 126923406
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Entry
126923406 CDS
T09368
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126923406
03036 Chromosome and associated proteins [BR:
baff03036
]
126923406
Transcription factors [BR:
baff03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
126923406
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
126923406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
126923406
NCBI-ProteinID:
XP_050592771
LinkDB
All DBs
Position
13:5197286..5206944
Genome browser
AA seq
1921 aa
AA seq
DB search
MSSLFKRDTKNRVYMKERLARVEEVKKSIRSLCDNDSSTPEDVRPFFYKFGNSRDNSIER
SSDEDGINRPKQAKRSRRESSEEESEAAHHKQKKGKEHLKNDGHKKIVRNKKVDSNNVRK
EKSKTRNSVSSDSDDVIYEKSAEKKTKRHSSLKSKQKDLNLYKEEADSSSSKEFQTSKIS
LSSLSVMKKAGKDRVISTKSNPESTSQLIKKTRISKEQSLQFKSHVVKIFNQFKAICSEY
EIQMEHVKWKYFKKELTYQESAFNVIEKSKNVINNLKLELNAQKEELTNFYEEWSKSHKV
QSIAHEDCSLGDNEIAKEREDTEESNKSENSSNAASVVSECDNEEIFSDEGTNNTKINVD
KNKTNNTLTKVSEKLIGDNEKSDQIISSILDNKQEDKTYTRDDLKVIDANEKISEEYQIS
TNEHAMNESVDDIFEDTAEDIDFNDLIEARDECRNKNGLKLKELEKNNDNKDKNSCPTKI
ENAKSKLVFSDEIVKSTEEKKNDVLDDIDAEEQAKKAMLESDSETPTNDESLNEKFIESF
GTNDSFKEKDISQSKKIKCDKKEGKDKTQSNSIHENNSLDKLDELINEEVCAKRALLESN
SDDSMSPCDKKENLSKKHYSSDSSENSSSDNDIKLKPLIINTSSKKNKDEDKNLTKDKKA
LYFRQPPRLPKISYAGSDKKLKMFCKVVVEKLPENALKKYKNALEKSRQYLENKELRSLI
DLDRLQNNRKNTFGSTRSSLSRKAKKTKVKEIEDSPLNHLKNENAEEDSDIIENIGEDSD
INNDISIAKIQANFQTNRELMLEADAVTKKALLYSSDSDIGERKESTSENSNSEEDKSKT
KSKDLPKRSTQKAEKKSSDKENDDKWKKNKWRRNKLLTMKFSSDSDSDVAREKWNKKQKG
TEKAEESYVGHSAIKVVKRERRNRRQIIDSDSDLQVINSDTKSNKSAMSEDNMSSDSDSS
IGKPKKMHKRKTHKSSGSDSSIIEKRTKPKRRRIKNISSNSDENNDKDLDITNSQGTPGK
KGRKNIRKVMKDKQVTSDTKQAAKEEEERLKRIAERQKLYNEMYEARLAGEEKVDKLVLD
FDPETKEELVTVHENLVKRLKPHQAEGIKFMWDACFESLERVNSSSGSGCIIAHCMGLGK
TLQVIALGHTLLTHEKTGVKTIMIVCPLSTVLNWVNEFTNWLKDIEHDIEIYEMTKLRKN
IERKFQLESWQRTGGVLIIGYEMFRNLSGTNNKMRKNIKEAVLQYLINPGPDVVVCDEGH
LLKNEDTALSKSMKQIKTLRRIVLTGTPLQNNLIEYHCMVQFVKPNLLGTKKEFLNRFGN
PITNGQFDDSTEYDVTLMKKRAYVLHKMLKGCVQRFDYSVLTPFLPPKQEYVIFVSLTEM
QINMYQHYLDNFARRIRNANGSLFADFQSLQRIWTHPLVLRMNAEKIEKINEKKFEISDS
EGSLKDFIDDSEIETTTSMSTEEDDDIVTIDTNITKNTRTNSKNNRPEAEIIPEEPEKKE
EEWWLQFVKLEHFEDMRVSSKLILLFGILKECEQIGDKVLVFSQSLYSLSLIEQFLEKID
NTTQNGENSEYIDGHTGSWSLGLDYFRMDGQTSAENRNAWCRIFNEPSNTRARLFLISTR
AGGLGINLTAANRVIIFDASWNPSHDVQSIFRVYRFGQKKPCYVYRFLAAGTMEEKIYNR
QVTKLSLSCRVVDEQQIERHYSNQNLNELYTFERNNGEKPTLNLPKDRLLAEIFLKYKNF
VENYHEHDSLLENKAEEELNEEERKQAWLEYEEEKKGKPPTMPSYSMAFAHNMMLNQYKI
PSPLSIGTDYEKLRILLQKDYPNATPQTQQLMTANVLTNMYNYMEQHSFYNNANSIIDQN
PNLTSVPNMPQTSYSVPNRIKNLTNQQKDYRITDIRSGDVDDDVVEVISTTVNNKNKNQE
E
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttattcaaaagagatactaaaaatagagtatatatgaaagaacggcttgca
agagtggaagaagtgaaaaagtcaataaggtcattatgtgacaatgattccagtactcct
gaagatgtacgacctttcttttataaatttggaaattcacgtgataattcaattgaaagg
tcatctgatgaagatggcattaacagaccaaaacaagcaaaaaggtctagaagagaatct
tctgaggaggagagtgaagctgctcatcataaacaaaagaaaggcaaggaacatttaaaa
aatgatgggcacaaaaagattgtgagaaataagaaagttgattctaataatgtaagaaaa
gaaaagagtaaaaccagaaattcagtttctagtgattcagatgatgtaatttatgagaaa
tctgctgaaaagaagacaaaaagacattcatcattaaagtcaaaacaaaaagatctcaac
ttatataaggaagaggcagactctagttctagcaaagaattccaaacatcaaaaatttct
cttagtagtttgagtgttatgaaaaaagctgggaaggatcgagtaatatccactaagtca
aatccagaatccacatcacagttaataaaaaagactagaatcagtaaagaacaaagctta
cagtttaagtctcatgttgtgaaaatttttaatcaatttaaggcgatttgttcagagtat
gaaatacagatggaacatgtaaaatggaaatattttaagaaagaattaacataccaagaa
tcagcgtttaatgttatagaaaaatcgaaaaatgtgatcaacaatcttaaattggaactt
aatgcacaaaaagaagaattaacaaatttttatgaagaatggagtaaaagtcataaagta
caaagcatagctcatgaggactgttctttaggtgataacgaaatagcaaaagagagagag
gatacagaagaatccaataaatccgagaacagctcgaatgcagcaagcgtagtttctgaa
tgtgataatgaagaaatattttctgatgaaggaacaaataatacgaaaataaacgttgat
aaaaacaaaacaaacaatacattaactaaagtttcagaaaaattaataggtgacaatgaa
aagagtgatcaaattatctcttccatcttagacaacaaacaggaagataaaacttataca
agagatgatttgaaagtaattgatgcaaatgagaagatatctgaagaatatcagatatct
acaaatgaacatgctatgaacgaatccgttgatgatatatttgaagatacagctgaagat
atagactttaatgatttgatagaagccagagatgaatgtaggaataaaaatggtttaaaa
ttaaaagaacttgaaaaaaataatgataataaagataaaaactcgtgccctactaaaatt
gaaaatgcaaaatctaaattagttttttctgatgaaattgtaaaatcaactgaagaaaag
aaaaatgacgttttagatgatattgatgccgaagaacaagctaagaaggcaatgttagaa
tcggactcagaaacacccacaaatgatgaatcactgaatgaaaaatttattgaaagtttc
ggcacaaatgatagtttcaaggaaaaagacatatcgcaatcaaaaaagataaaatgtgat
aaaaaagaaggaaaagataagacacagagtaattctattcatgaaaataattcattagac
aaacttgatgaactcattaatgaagaagtttgtgctaaacgtgcacttcttgagtcaaat
tcagatgattctatgagtccttgtgataaaaaagaaaatttaagtaagaaacattattcc
agtgacagtagtgaaaattcaagttctgataatgatattaaattaaaaccactaataata
aatacttcttcaaagaaaaataaagatgaagataaaaatcttacaaaagacaaaaaggca
ttgtattttagacaaccaccacgtttacctaaaataagttatgctgggtcagataaaaaa
ttaaaaatgttttgtaaagttgttgtagaaaaattaccagaaaatgctcttaaaaagtat
aagaatgcgttagaaaaatctcgacaatatttagagaataaagagcttagaagcctaatt
gatttggataggttacaaaacaatcgtaaaaatacttttggctcgacacgaagttctttg
tctagaaaagcaaaaaagactaaagtaaaggaaattgaagattccccattgaatcatttg
aaaaacgaaaatgcagaggaagattctgatataattgaaaatataggggaagattctgat
ataaacaatgatatatcaatcgcaaaaatacaagctaatttccaaactaatagggaatta
atgttggaagcagatgcagttactaagaaagctcttttatattcttccgactcagatatt
ggtgaacgaaaagaatctacttctgaaaacagtaacagtgaggaggacaaaagtaaaacc
aaatcaaaggatcttccaaaacgatcaactcaaaaagctgaaaaaaagagtagtgataag
gaaaatgatgacaaatggaagaaaaataaatggaggcgaaataaactattaacaatgaag
ttctcctctgattcagattctgatgttgcaagagaaaaatggaataagaaacaaaaaggg
acagaaaaggcagaagaaagttatgtcggacattcagctatcaaagttgtaaaacgcgaa
agaagaaatcgtagacagattatagattctgattcagatctgcaggtgataaattctgat
acaaaatcaaataaatcggccatgtcagaagataatatgtcttcagatagtgattcttca
ataggaaagccaaaaaagatgcataaacgtaagacacataaatcatctggttctgactct
tcgattatagagaaaagaaccaaaccaaagagaagacgcattaaaaatatatccagtaat
agtgatgaaaataacgataaagaccttgatattacgaattctcaaggaacacctggaaaa
aaaggtcgtaaaaatattcgaaaagtaatgaaagataagcaagttacaagtgatactaag
caagctgctaaagaagaggaagaaagacttaaacgtattgctgagagacaaaaattgtac
aatgagatgtatgaagcaagattggctggcgaagaaaaagtagataagttggtattggat
tttgatcctgaaacaaaagaggaattggttactgtccatgaaaatttagtaaagcgttta
aaaccccatcaagctgagggaataaaattcatgtgggacgcatgctttgaatcattggaa
agagtaaattcttctagcggatctggatgtataattgcacattgtatgggactaggtaaa
actcttcaagtaattgccttgggtcatacacttttaacacatgaaaaaactggtgttaaa
acaattatgatcgtttgtcccttgagcacggtacttaattgggtaaatgaatttacgaat
tggttaaaggatatagaacatgacatcgagatttacgaaatgactaaattaaggaaaaat
atagaacgaaagtttcaattggaaagctggcaaagaactggtggtgtactcattattggc
tatgaaatgtttaggaatctaagtggcacaaataataaaatgagaaagaatatcaaagaa
gcagttttacagtacttaataaatcctggtccagacgtcgtagtttgcgatgaaggacat
ttactaaaaaatgaggatactgctctcagtaaatcaatgaaacagattaaaacattacga
agaattgtacttacaggaacaccactccaaaataatttgatagaatatcactgtatggta
cagtttgtaaagccaaatcttttaggaacgaagaaagaatttttaaacagatttgggaat
ccaataactaatggtcaatttgatgattctactgaatatgatgttacattaatgaaaaaa
cgagcatacgttttacataagatgttaaagggctgtgtacaaaggtttgattattctgta
ctaacaccgtttttaccaccgaaacaggaatatgtaatttttgtcagtctaactgaaatg
caaattaatatgtatcaacattatttggataattttgcaaggcgaatacgcaatgccaat
ggatctcttttcgcagattttcaatcattacaaagaatatggacacatcctttggttttg
cgaatgaatgcagaaaagatagaaaaaataaatgaaaaaaaattcgaaatcagtgattcg
gagggttctttaaaagactttattgacgattccgaaatagagactacgaccagtatgagt
actgaagaagatgatgatattgtaaccattgatacaaatattacaaaaaatacaagaact
aattccaaaaataatagaccagaagctgaaataattcctgaagaacctgaaaagaaagaa
gaggaatggtggttacagtttgttaaacttgaacattttgaagatatgagagtttcttcc
aaattgatacttctttttggaatcctgaaggaatgtgaacaaatcggagacaaagtcttg
gtattttcacaatcgttgtattcattatctctaatcgagcagtttcttgaaaaaatcgat
aacacaacacaaaacggtgaaaattcggaatatatagatggacatactggaagttggtca
ttggggttggactactttcggatggatggtcaaacatccgctgaaaatagaaacgcatgg
tgcagaatatttaatgaaccatcaaatacaagagcaagattattcctaatctcaaccaga
gcaggtggactgggaattaatttaaccgctgccaatcgtgttattatttttgacgcaagt
tggaatccttctcatgatgtccaaagtatatttcgtgtatacagatttggtcaaaagaaa
ccatgttacgtttatcgatttctagcagctggaacgatggaagaaaagatctacaataga
caagtgacaaaactatcactttcttgtagagtcgtcgatgagcaacaaatagaacgtcat
tatagcaatcaaaatttaaatgaattgtacacatttgaacgaaacaacggagagaaaccg
actctgaatttgcctaaagatagattattagcagaaatatttttaaaatataaaaatttt
gtagagaactatcacgaacatgattctcttttggaaaataaagcagaggaagaactgaat
gaggaagaaagaaagcaagcttggttagaatatgaagaggaaaagaaaggaaaaccacca
acaatgccatcatattcaatggcgttcgcacataatatgatgttaaatcaatataagata
ccgtcaccattgagtattggcacggattatgaaaaactccgaatacttcttcaaaaggat
tatcctaatgcaacaccacaaacccaacaattgatgactgctaatgtattaacaaatatg
tacaattacatggaacaacattctttctacaataacgcaaattcaataatcgatcagaat
ccaaacttaacttcggtacccaatatgcctcaaacatcttattcagtaccgaatagaatt
aagaatttgaccaatcaacagaaagattataggattactgatattagatctggagatgtt
gatgatgatgttgtagaggttatatcaacgacagtaaataacaaaaataaaaatcaagag
gaatga
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